Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08233 ATGGCGGTTGTGGGAGGAGCAGGTGTTCAAGGATGGGGAGACATAAAGAGTCTGAGCATCCAATGCATCACCGGACGGTGGTTCGTGGTGTTTGCTTCCTTTCTAATCATGGCAGCTGCCGGAGCCACCTACATGTTTGGTCTCTACTCTGGTGACATCAAAACCACTCTTGGCTATGACCAAAGCACTCTCAATCTCCTCAGTTTCTTCAAAGACTTTGGTAGCAACGTTGGTGTCCTCTCTGGCCTAATCAATGAACTCTCTCCACCTTGGGTAGTCCTAGCCATAGGTGCAGTCCTTAACTTCTTAGGCTACTTCATGATTTGGCTCTCTGTCACTAAAAAAATTCCAAGACCTCAAGTGTGGCAGATGTGTCTCTACATCTGCATAGGTGCTAATTCCCAATCCTTTGCCAACACTGGTTCCCTTGTTACTTGTGTCAAGAACTTCCCAGAAAGCCGTGGGGTTGTCTTAGGCATTCTCAAAGGCTATGTGGGTCTTAGTGGTGCTATCATCACACAACTTTACTTTGCTATTTACTATAATGACACAAAAGGTTTGATTTTGTTCATTGGTTGGCTTCCAGCTGCTATCTCCTTTGTTTTCCTTAGAACAATTCGATACATGAAGCCTGTTAGAAGGCCTAATGAGCTCAAGGTTTTCTATAATTTCTTGTATATTTCACTTGGTCTTGCTGGGTTTTTACTTGTCATGATTATTATAGAGAAAAGGGTCCACTTCACACAGAGTGAATATGGTGTCAGTGCTGCTATGGTCACTTTCTTGATGTTCCTTCCACTTGCTGTTGTTTTCTTTGAAGAATACAAGATCTGGCAGGGTAAAAAGCTTGAATTGGTTGATCCCAAGCCACTCAAAATAGTAACACAGAGTGAAAAGGTCAATCCTGATGAGGCTACTAAAATCGTTGACTCTGTTTCAGCACCAAAAATTGCCCAAGAAGACCACAGTACTAAATGGTGGCAAGATGTGTTTAGTCCACCACCTAGAGGTGAGGACTATACCATACTTCAAGCCCTTTTCAGCATTGACATGTTAATTTTATTTGTGGCTTGCATTTGTGGTGTTGGGGGTACTTTGACTGCAATTGATAATTTGGGTCAGATAGGAACCTCACTTAGATACCCCAAGAGAAGCATAAGCACTTTTGTGTCCTTAGTTAGTATTTGGAATTATCTAGGACGTGTTTTCTCTGGATTTGTTTCTGAACATTTTCTAACAAAGTACAAGTTCCCTCGTCCTCTTATGCTTACTTTAACCATGCTCTTGTCATGTGTTGGTCACCTTTTGATAGCATTTGATGTGCCAAATGGTCTCTATGTGGCTTCAGTAATTATTGGGTTCTGTTTTGGTGCACAGTGGCCTTTACTTTTTGCCATTATATCTGAGCTTTTTGGGCTTAAATACTATGCAACTTTGTACAACTTTGGAAGTGTAGCAAGTCCACTTGGGTTATATGTGCTTAATGTGAAGATCACTGGGCATTTATATGACAAAGAAGCAAAGAAGCAATTGGCAGCATTGGGGCTACAAAGAAAGGAAGGGCAGGAATTGAATTGTGTTGGGGTCAATTGCTTCAAGTTGTCCTTCATTATTATCACAGTTGCAACTTTCATAGGTGCAATTGTTTCACTCATTTTGGTGGCAAGGACAAGAAAGTTTTACAAAGGGGACATATACAAGAGGTACAGGGAAGAGGCAACGGTTGATCAAGAAACTGAAATGGGCACAAGAGTGGAGAATGGAGACAAGACAGGGCAAGATGCCAAAATTGGTCAGCATGTGGTGTCAGCTTAG 1815 0.4193 MAVVGGAGVQGWGDIKSLSIQCITGRWFVVFASFLIMAAAGATYMFGLYSGDIKTTLGYDQSTLNLLSFFKDFGSNVGVLSGLINELSPPWVVLAIGAVLNFLGYFMIWLSVTKKIPRPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYFAIYYNDTKGLILFIGWLPAAISFVFLRTIRYMKPVRRPNELKVFYNFLYISLGLAGFLLVMIIIEKRVHFTQSEYGVSAAMVTFLMFLPLAVVFFEEYKIWQGKKLELVDPKPLKIVTQSEKVNPDEATKIVDSVSAPKIAQEDHSTKWWQDVFSPPPRGEDYTILQALFSIDMLILFVACICGVGGTLTAIDNLGQIGTSLRYPKRSISTFVSLVSIWNYLGRVFSGFVSEHFLTKYKFPRPLMLTLTMLLSCVGHLLIAFDVPNGLYVASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVKITGHLYDKEAKKQLAALGLQRKEGQELNCVGVNCFKLSFIIITVATFIGAIVSLILVARTRKFYKGDIYKRYREEATVDQETEMGTRVENGDKTGQDAKIGQHVVSA. 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08233 604 Gene3D MFS general substrate transporter like domains 342 562 IPR036259 -
Seca7g08233 604 CDD MFS_Mch1p_like 25 547 - -
Seca7g08233 604 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 27 567 - -
Seca7g08233 604 Pfam Nodulin-like 26 271 IPR010658 -
Seca7g08233 604 SUPERFAMILY MFS general substrate transporter 26 560 IPR036259 -
Seca7g08233 604 FunFam Nodulin family protein 342 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08233 Seca-Chr7 187143449 187145296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08233 13 572 Nodulin-like Gene Family AT2G39210 71.429 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08233 - - pvu:PHAVU_007G024800g 974.926