Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08226 ATGCAAAGCTTCAAGACAACTGAATCAAACTCACGACCATTTTGCCATTCTTCCTTCTTCTTTGGGGGAGATGACACCAGCGGAAATCCAACGCCTTTCTCTGATCTTCAACGTTCATTTCAACAACACGATGCTGTTGATTTAAGCTCAAGTTCTGTGTTTGGTGCAAAGTCGAGCAATGTCGCTATTGTTGCAAGTAACTTGCAGTATGGGACATTCAACACTAACGTTGGGTCTGCTACAACAGGGGAAGTGTGCATTGAGACAGGTCAGCAGCCACTGTTCAACAAAGGAACCACTCTTGTTGCAGGGAACGAGAATTGGGGTGATTCAGGCATGGCAGAAAATAGTCAACAAACTGAAGATACTTCCACAGATATTGATGCTGATGATAAAAACCAATGTTTCTCAACTGGGTCATGGTGCAATGGAGTTCGGCATGGGGCACTTGTAACTGTGGACTCCAAGGATCAAAGTAAGAGTAAGGTTAAAGCTGAAGACCAGAAGAGCCTTCGTAGGCTGGCCCAGAATAGGGAGGCTGCAAGGAAGAGTCGGTTAAGGAAAAAGGCATATGTGCAGCAATTGGAGAACAGTCGACTTAGGCTTGCTCAAATAGAACAAGAGCTTCAACGAACACGTCAGCAGGGTGTATTTATTGCAACTGGAATTGCGGGGGATCATGGTCATTCAGTTGTTGGAAATGGTGTGTTAGCATTTGACATGGACTATGCCCGTTGGGTTGATGAGCATCAACGTCTGGTCAATGACATAAGATCAGCTATGAATTCTCAAATGGGTGATAATGAACTGCAGCTTCTTGTTGATAGTGTCATGGCACACTATGATGAATTATATAGGTTGAAGAGCTTAGGGGCAAAGGCTGATGTATTTCACATACTTTCCGGGCTGTGGAAGACACCTGCTGAAAGATGCTTCATGTGGCTTGGTGGATTTCGTCCATCTGAACTTCTCAAGATAGTGGGAAAACACCTTGATCCCTTAACCGATCAGCAGTTGATGGGAATTTACAATCTGCAGCAGTCTTCTCAGCAGGCTGAGGATGCTTTATCTCAAGGCATGGAAGCATTGCAACAATCTCTTTCAGAGACACTTTCATCCACCTCCCTAGGACCTGCTGGTTCTGGAAATGTTGCTGAGTATATGGGCCAGATGGCAATTGCAATGGGCAAGCTTGCCACACTAGAGAGTTTCCTTCATCAGGCTGATCTCTTGAGGCAACAAACTATACAACAGTTGCAACGAATTTTGGCCACACAACAAGCTGCTCGAGCTCTCCTTGTCATAAATGATTACATTTCAAGGATTCGGGCACTTAATTCATTATGGTTAGCATGCCCTAAAGAGTACTAG 1371 0.4464 MQSFKTTESNSRPFCHSSFFFGGDDTSGNPTPFSDLQRSFQQHDAVDLSSSSVFGAKSSNVAIVASNLQYGTFNTNVGSATTGEVCIETGQQPLFNKGTTLVAGNENWGDSGMAENSQQTEDTSTDIDADDKNQCFSTGSWCNGVRHGALVTVDSKDQSKSKVKAEDQKSLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQIEQELQRTRQQGVFIATGIAGDHGHSVVGNGVLAFDMDYARWVDEHQRLVNDIRSAMNSQMGDNELQLLVDSVMAHYDELYRLKSLGAKADVFHILSGLWKTPAERCFMWLGGFRPSELLKIVGKHLDPLTDQQLMGIYNLQQSSQQAEDALSQGMEALQQSLSETLSSTSLGPAGSGNVAEYMGQMAIAMGKLATLESFLHQADLLRQQTIQQLQRILATQQAARALLVINDYISRIRALNSLWLACPKEY. 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08226 456 Pfam bZIP transcription factor 168 198 IPR004827 GO:0003700|GO:0006355
Seca7g08226 456 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 167 211 IPR004827 GO:0003700|GO:0006355
Seca7g08226 456 PANTHER TRANSCRIPTION FACTOR TGA9 108 455 - -
Seca7g08226 456 MobiDBLite consensus disorder prediction 107 123 - -
Seca7g08226 456 ProSiteProfiles DOG1 domain profile. 236 452 IPR025422 GO:0006351|GO:0043565
Seca7g08226 456 MobiDBLite consensus disorder prediction 107 128 - -
Seca7g08226 456 CDD bZIP_HBP1b-like 169 221 - -
Seca7g08226 456 SMART brlzneu 165 218 IPR004827 GO:0003700|GO:0006355
Seca7g08226 456 FunFam BZIP family transcription factor 168 217 - -
Seca7g08226 456 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 172 187 IPR004827 GO:0003700|GO:0006355
Seca7g08226 456 Coils Coil 188 215 - -
Seca7g08226 456 Pfam Seed dormancy control 254 327 IPR025422 GO:0006351|GO:0043565
Seca7g08226 456 Gene3D - 169 215 - -
Seca7g08226 456 SUPERFAMILY Leucine zipper domain 169 213 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08226 Seca-Chr7 187072555 187077027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08226 3 455 bZIP Transcription Factor Family AT1G68640 56.992 1.69e-171 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca7g08226 DOG1 1.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08226 K14431 - gmx:100775783 654.825