Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08221 ATGGCTCTTCAACTTATGAAACCAGTCTCTTTCACTCTCATCACATTAGCACTCATTTCAATTACAAAACCTTTCTGTTCTTATTTCTCCATACCTTTACCTCCATCCCCTCTCTCCATTGCTGCTGCCACCATTGTCTCTGCTCTCATCCTATACTTTTTCTCTTCAAAGCGTTCAACCACTCTCCCTCCAGGCCCTCTCTCTGTTCCTATATTTGGCAATTGGTTACAAGTTGGCAATGACCTCAACCACCGTCTTTTAGCATCTCTTGCAGAAACCTATGGTCCTGTGTTCCTTCTCAAACTTGGTTCCAAAAACTTGGTTGTGGTCTCTGATCCTGAACTTGCCACTCAAGTTCTCCACGCACAAGGTGTGGAATTCGGTTCTCGACCAAGAAACGTTGTGTTTGATATCTTCACAGGAAATGGCCAAGACATGGTTTTCACAGTGTATGGTGATCACTGGAGAAAAATGCGCAGAATCATGACATTGCCATTTTTCACTAACAAGGTTGTTCAAAATTACAGTAACATGTGGGAAGAAGAGATGGATTTGGTAGTGAGAGACCTTAAGGTCAATGAGAAAGTGAGAAACGAAGGGATAGTTATCAGAAGGCGTCTTCAGCTTATGCTGTACAATATCATGTACAGAATGATGTTTGATGCTAAGTTTGAGTCTCAAGAGGATCCTCTGTTTATTCAGGCAACGAAATTTAACTCTGAGAGAAGCCGTTTGGCACAGAGCTTTGAGTACAATTATGGAGATTTTATTCCATTGCTCAGACCATTCTTGAGAGGCTACCTCAACAAGTGCAAGGACTTGCAATCTAGGAGGCTTGCATTTTTCAATGAGAACTATGTTGAGAAAAGAAGAGAAATAATGGCAGCCAATGGGGACAAGCATAAGATAAGCTGTGCAATTGATCACATTTTAGATGCTGAGATGAAAGGAGAAATTAGTGAAGAGAATGTGATTTACATTGTTGAAAACATTAATGTTGCAGCAATTGAGACAACATTATGGTCTATGGAGTGGGCTATAGCAGAGGTTGTTAATCATCCAACAGTTCAAAGCAAGATTCGTGATGAGATTTCAAAAGTGCTTAAAGGGGAGCCAGTTACAGAGTCCAACTTACATCAACTACCATATTTACAAGCCACAGTGAAAGAGACATTGAGATTGCATACACCAATTCCTCTGTTGGTGCCACACATGAACCTTGAAGAAGCAAAGCTAGGAGGGTTTACTATTCCTAAAGAGTCTAAGGTGGTTGTGAATGCTTGGTGGCTTGCCAATAACCCAGCATGGTGGGAAAATCCAGAGGAGTTTAGGCCAGAAAGGTTCTTGGAAGAGGAACGTGGGACAGATGCTGTTGCTGGAGGGAAGGTTGATTTTAGGTTTGTGCCATTTGGTGTTGGTAGAAGGAGTTGTCCTGGGATCATACTTGCATTGCCAATATTGGGATTGGTGATTGCAAAGTTGGTGACAGATTTTGAGATGAGTGCTCCAAATGGAACAAAGATAGATGTGAGTGAAAAAGGAGGACAATTTAGCTTGCACATTGCCAACCACTCCACTGTTTTGTTCCATCCAATTAGGACATGA 1605 0.4168 MALQLMKPVSFTLITLALISITKPFCSYFSIPLPPSPLSIAAATIVSALILYFFSSKRSTTLPPGPLSVPIFGNWLQVGNDLNHRLLASLAETYGPVFLLKLGSKNLVVVSDPELATQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVQNYSNMWEEEMDLVVRDLKVNEKVRNEGIVIRRRLQLMLYNIMYRMMFDAKFESQEDPLFIQATKFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQSRRLAFFNENYVEKRREIMAANGDKHKISCAIDHILDAEMKGEISEENVIYIVENINVAAIETTLWSMEWAIAEVVNHPTVQSKIRDEISKVLKGEPVTESNLHQLPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKVVVNAWWLANNPAWWENPEEFRPERFLEEERGTDAVAGGKVDFRFVPFGVGRRSCPGIILALPILGLVIAKLVTDFEMSAPNGTKIDVSEKGGQFSLHIANHSTVLFHPIRT. 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08221 534 FunFam Trans-cinnamate 4-monooxygenase 54 526 - -
Seca7g08221 534 Pfam Cytochrome P450 63 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08221 534 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08221 534 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08221 534 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08221 534 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08221 534 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08221 534 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08221 534 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08221 534 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08221 534 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08221 534 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08221 534 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08221 534 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08221 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Seca7g08221 534 SUPERFAMILY Cytochrome P450 63 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08221 534 Gene3D Cytochrome P450 54 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g08221 534 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 45 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08221 Seca-Chr7 186990014 186992283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08221 72 531 Monolignol Biosynthesis Gene Families AT2G30490 65.443 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08221 K00487 - gmx:100812188 927.546