Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g08195 | ATGTTTGTGGTTGCAGGTTACAGGAAAAAGAAAAGCGGCGGGAAGGATGGAAAAGAAGAGTGTGGTAAGGTCTATGAGTGTAGATTTTGTTCTCTCAAGTTCTGCAAGTCTCAGGCTCTTGGGGGACACATGAACCGTCACCGCCAAGAGAGGGAAACAGAGACACTGAACCATGCTCGTCAGCTTGTCTTCCGTAACGATCAAAACCTTGTGGCACAAGCTCCTCCTCACCTAGGATGCTGTCAACCAATAGCACCAGGGGGTTATCATTCATCAGGTAACATGGGAGACCCAACAGTGCCTATGAGATTCCCAAGATACTTCTCTGCTTCATCCTCAACTCACATCCCACCACCACAACCACCTCAACCATATTTATATGCTTCACCTTCAAGGCCAGTGTCTTTTCCCTCACATTTTCCACAGCATCAGGTGAATGATTACCACCATGTGGGTCATGTCATGAGTAGCAGCCAGCCATATAACATGAGCTATGCAGGTGGAGGTGGTGGAGATTCAAGTAGTTACACTTGTGTTGGTGCACCAGTGGGACAAGGGTTGTTGAGGGGAATGGATGGTGGTAAGGACGGGTCACTGCAAAGTCAGGAGGAAGGGTTGAATTGGGGACGGAGCTATTCAGGTCCAGGGGGAACAGCACAGCATCGTTTGGATCCTCCTTCATCGATCAATCGGTTTCAAGATGGTTTTTAA | 711 | 0.4838 | MFVVAGYRKKKSGGKDGKEECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNHARQLVFRNDQNLVAQAPPHLGCCQPIAPGGYHSSGNMGDPTVPMRFPRYFSASSSTHIPPPQPPQPYLYASPSRPVSFPSHFPQHQVNDYHHVGHVMSSSQPYNMSYAGGGGGDSSSYTCVGAPVGQGLLRGMDGGKDGSLQSQEEGLNWGRSYSGPGGTAQHRLDPPSSINRFQDGF. | 237 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g08195 | 236 | MobiDBLite | consensus disorder prediction | 193 | 236 | - | - | |
Seca7g08195 | 236 | SUPERFAMILY | beta-beta-alpha zinc fingers | 23 | 53 | IPR036236 | - | |
Seca7g08195 | 236 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 27 | 47 | IPR013087 | - | |
Seca7g08195 | 236 | Gene3D | Classic Zinc Finger | 8 | 77 | - | - | |
Seca7g08195 | 236 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 25 | 52 | IPR013087 | - | |
Seca7g08195 | 236 | FunFam | Zinc finger protein STAMENLESS 1 | 4 | 73 | - | - | |
Seca7g08195 | 236 | PANTHER | ZINC FINGER PROTEIN JAGGED | 15 | 185 | IPR045320 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g08195 | Seca-Chr7 | 186566862 | 186568025 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g08195 | 8 | 186 | C2H2 Transcription Factor Family | AT1G13400 | 49.451 | 6.34e-35 | 122 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Seca7g08195 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g08195 | - | - | aprc:113871902 | 353.599 |