Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08192 ATGGACCACCGCCGGAAAGACAAGGTGGTCGTCATCATGGGCGCCACTGGCTCCGGAAAATCGCGTCTTTCCATCGACCTCGCCACCCTCTTCCCTTTCTCTGAAATCATCAACTCCGATAAAATGCAAGTCTACAGAGGCCTAGAAATCACCACCAACAAGATCCCCCTCCACCGACGCAACGGCGTCCCCCACCACCTTCTCGGCGACGTCGACCCTTCCCTCGGCGAGTTCTCCCCTTCTGACTTCCGCCGCCGTGCCGGCGACGTCATCTCCGACATCACCTGCCGGAGGAAGCTCCCTATCGTCGTTGGTGGCTCCAACTCCTTCGTTCACGCTCTTCTGGCGGAACGATCGATATCTTCCGAGTTAAGGTACAGGTGTTGCTTCCTCTGGATGGACATATCGTTCCCTGTTCTATCGGAATATTTGCTGAGACGAGTCGATGACATGCTTGACTCGGGAATGGTGGACGAGTTGGCTCAGTTCTTCGACCCGGACGCGGCGAATGGAACCGGGTTGAGAAAAGCCATCGGGGTGCCCGAGTTCGACCGGTTTTTTAAAGAGTATCCATCAGGTGAGGATGATTCGGTGCGGGAGAGTGTATACGAGGAAGCAGTGAGGGCGATTAAAGACAACACGTGTCAGCTTGCGAAGAGACAGATAGGGAAGATCATGCGGTTAAAACGAGCAGGATGGGACCTACGGAGGATTGACGCCACGGAGGTGTTTCGGGCGGTGCTGACGTCAGGGTCTCACGGCGGGTCCGATATATGGAAGAGGCAAGTGTTGGAACCAAGCGTGAAGATCGTGAGGCGCTTCTTGATGGAGTAG 834 0.5564 MDHRRKDKVVVIMGATGSGKSRLSIDLATLFPFSEIINSDKMQVYRGLEITTNKIPLHRRNGVPHHLLGDVDPSLGEFSPSDFRRRAGDVISDITCRRKLPIVVGGSNSFVHALLAERSISSELRYRCCFLWMDISFPVLSEYLLRRVDDMLDSGMVDELAQFFDPDAANGTGLRKAIGVPEFDRFFKEYPSGEDDSVRESVYEEAVRAIKDNTCQLAKRQIGKIMRLKRAGWDLRRIDATEVFRAVLTSGSHGGSDIWKRQVLEPSVKIVRRFLME. 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08192 277 Gene3D - 6 275 IPR027417 -
Seca7g08192 277 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 6 275 IPR039657 -
Seca7g08192 277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 167 IPR027417 -
Seca7g08192 277 Pfam IPP transferase 124 222 - -
Seca7g08192 277 Pfam IPP transferase 43 118 - -
Seca7g08192 277 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 137 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08192 Seca-Chr7 186481081 186481959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08192 125 275 C2H2 Transcription Factor Family AT2G27760 32.022 2.71e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08192 K10760 - gmx:100813761 429.869