Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08178 ATGGATTACAACACCAAAACAACAAACCCCACTTCCCCACCGCGCCTAAAGCTCTTTGGCTTCAGCGTCCATGAAGACTCCTTCTCCTTCCAAGAAAACGAGGTGCTGCTGCATGAAGACCTACCAGACTCAACCACAAAGGCCACTTCCACTTCCTCCTCCCCATCCGGGTCACCGGACTCCACCGGCGGCGGCGGAGGTGACTCTTTCCCTCCTTCCTCCGGTGACCGGAAATACGAGTGCCAGTACTGTTGCAGAGAATTTGCAAATTCACAAGCACTTGGTGGACACCAAAACGCCCACAAGAAAGAGCGTCAACAACTCAAGCGTGCACAGTTACAGGCCACACGAAACGCTGCCGTTTCGCTTGTCCGAAACCCTATCATCTCCGCCTTTGCCCCTCCGCCGCACCTGCTGGCTCCGCCGGGGTCCGTGATGGTCCCGGGAGCTCCGTCCTCATGGGTGTACATGCCGCCACGTGCCGCGCCTCCTCCCTTCCACGTGTCAGTATCACACGGCTGTGCGTTCCCGTCGGCGAACTGCAACACCATGAGTAGTAATAATATCACCACCACCATAACGGGTGCGAAATCAGCGGGTGTAGGGATGTTTCCTTATGTTGGCGTTGTAGGGGATTCACCATCCGCATTGTCAACGATGCAGGTACAGGCCCGGGCCCACCACGCCAGAATGGATGGGCCCTCTTTGAGTAGGTTCTCAAAAGGGGATGGTGGGCCCAATTTTGATGATGCATTGGGCTTGGACTTGCATCTTAGTCTTGCGCCAGCTGCGCCGTGA 798 0.5639 MDYNTKTTNPTSPPRLKLFGFSVHEDSFSFQENEVLLHEDLPDSTTKATSTSSSPSGSPDSTGGGGGDSFPPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSLVRNPIISAFAPPPHLLAPPGSVMVPGAPSSWVYMPPRAAPPPFHVSVSHGCAFPSANCNTMSSNNITTTITGAKSAGVGMFPYVGVVGDSPSALSTMQVQARAHHARMDGPSLSRFSKGDGGPNFDDALGLDLHLSLAPAAP. 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08178 265 PANTHER ZINC FINGER PROTEIN 5 7 264 IPR044299 GO:0010090
Seca7g08178 265 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Seca7g08178 265 MobiDBLite consensus disorder prediction 34 74 - -
Seca7g08178 265 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
Seca7g08178 265 MobiDBLite consensus disorder prediction 43 63 - -
Seca7g08178 265 Gene3D Classic Zinc Finger 69 126 - -
Seca7g08178 265 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Seca7g08178 265 FunFam Zinc finger protein 6 71 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08178 Seca-Chr7 186290170 186290967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08178 1 263 C2H2 Transcription Factor Family AT1G68360 44.484 7.82e-55 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08178 - - gmx:102663095 380.948