Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g08172 | ATGGGGCAGAGGAGAACAACTGGACAACAACTCCTTTATACACAAACATGTATACTCCAATTGCAGCTCAAACCCTCAGCTCACAATTTTTTATATATTTCTCTTATCGCTCTCCAATACTTTCCATATAGAACTAGGCAAGTCTACAAAATGAACCAAAAAAGCCTCTTATTTACCCCCAAGGCCCTCTATTCTCCCCTGATTTATTCATACATCATCCTCTTCAATCTCCTAACCAGAACCACTCTGTGCTTTGTGGAGCCTAAGTTCGAAGCATGTCAACCCAGAACCTGCGGCAACAACCAAAGTATAAGCTACCCGTTCTACATCCAAGGAGTACAAGAACCCTTTTGTGGGTACCCTGGTTTCGGTGTCTCTTGTAGCAATGATGGCTTCCCAATCCTCAATCTGTCTAATACCCTTCACATCATCGATCAAATATTGTATCAAAATCTGTCGCTACGAGTGTCTAATGCTGTGTTATCGACATCAAACACAACCACAGGTTGTCCTTTTCCTACCAAGAACCTTACTCTTCCCAGCATCTTCCATTTTGTTCCCAACCAAAAGGACGTGAGATTGTTCTTTGACTGCGACTTACCATCGGTGCCCAGAGAGCTGCAAGAGCAGATAATTGAGTGTTCCGCAGATAGGGAAAAGAGTTCAGTTCTGGCATTGTATAAGGATGATAAAAATCTAAGCTTTGCGTCAAAGAATTGCAAGGGTGAAGTGGTGGATGTGACGGTGGAAGATGATGATGATGATGGGAAAGGAGGGATTGAAGAGGCACTGAGAAAAGGGTTCTGGTTGAATTGGACTGCCAGTGACTGCAGGGAATGCAACAGCACTGGAGAGGCTCAGCCAAAGAAGAAGAGAACAAAGTTGAACCTGCTACTTGGACTTGGAATAGCTGTTGCATTGCTGTTGCTCTTGGCTTTGAACCTTACATTTCGTTGCTTGCGGAAACAAAATTGTGCGACCGGTGAACTGTTTATTGAGAGGTTCCTAAAGCAACACGGTTCTCTTCCAACCACAAGGTACAGTTACTCTCAGATAAAGAAAGTCACTGATTGTTTCAAAGTCAAATTAGGCGAGGGAGGATATGGAAGCGTATATAAAGGAAAGCTACAAGATGGGAGTTCTGTTGCAGTCAAGGTTTTAAATGAACTTAAAGGAACTGGGGAGGAATTCATCAATGAAATTGCAAGCATTAGCAGGACATCTCATGTTAACATTGTCACTCTTGTGGGGTTTTGTTTCCAAGGTTCAAAACGAGCTTTAGTTTATGAATTCATGCCTAATGGATCCCTTGAGAAGTTCATATGTGAAGAAACTCCAATGTTAGTTGGTCAGCAATTGGCATGCAAGACTTTGTATGATGTTGCCATTGGTGTTGCTCGTGGATTGGACTATTTGCACAGAGGCTGCAATACTAAAATCTTGCATTTTGATATCAAACCTCACAACATACTACTTGATGAAGATTTCTGCCCAAAGATTTCAGATTTTGGACTTGCTAAAATATGTCCAAGAAAAGAGAGTATTGTGTCCATGTTGGGTGCAAGGGGAACGATTGGATATATTGCTCCAGAGGTGTTTTGTAGGACTTTTGGTGGGGTGTCTCATAAATCTGATGTATACAGTTATGGAATGCTAGTTTTAGAAATGGTCGGAGGGAGACAGAATAAAAATGTTGAACTTGATTGTTCTAGTGAGATATATTTTCCACATTGGATTTATAAGAAACTTGAATTAGATCAAGATTTTGGATTTCGGTGTATTGAAAATGAAAGTGACAGAGTAATTGTGAGAAAGATGATCATGGTGAGCTTATGGTGCATACAAACGGACCCTTTAGCTCGACCATCTATGAGTAAAGTGGTGGAGATGCTAGAAGGAAGCCACGAGTCCTTGAAAGTACCACCTAAACCCTTCTTGCGTTCTCCACCAACATCTCCAGCACATTACTCCAGCTCAAAGTGTCCGCAGTCTTTTCATTGTGGAAGTCATGGGCAGATCAGCTTTCCTTTCACAGACAGAGAGCACCCACAATGTGGCGCGTTATTAGCCATACATGGCTGTCATGTAAAGGATCCAGCTGCTCCCAAAACCATCCAACTAACCAACACGCCATCAAAACGGTCTTTTAATGTTCTCCTCATGGGTCGTTCTTCCATAACGGTCAATGATAATGATCAACAAAAAAATTTGGAGAACAATAGTTGCAAAACCTTCTTCAACAATTTTACTCTTCCTCCCCTCTCTCCTTTAGCTTCTTTCTATGTAAGTAATAACATAACTATGTTCAGCCTTCCAAATACTAACATGTCTCCCAGTTTCGAATGGCCAAGTTTTTTGGCATCGCCATCCTGTTCAGCGGTTCAGGTTGCAGTAAAAGGGGTGCCAACTGATAACCCCTTTGATTTTCTAGCTCCTGAGCTCCTCATTGAAGTACAACTATCTGATGATTGTGACCATTGTCTTCGTCAAGAAGGGGGACAATGTCAACTTGACATTCAAGGAAAATTCTATTGCTCCAAAGGGAGTAGAGGTTGGGTTGTGAAAATGGTACTAGGGCTCGGAACAGGAGCATCACTTTCTCAGCCTTCTAAATTAGTCTTCCTAATTCGAATAACCTCTCCAGCTGTTACAGTTGCTCTATTGCTAGTAGTGGTCAAGATCCGCTATACAATATGGAAGAAGCAAAATCCAACCAATCTACTCATTGAGATCTTTTTGAAGAGACATGGATCCCTTCAAATCAAGAGGTATAATTATTCTGAGATAATGAAAGTGACCAATTCTTTCAGAAACAAATTAGGCCAGGGGGGATTCGGCAGTGTATACAAAGGACAATTACAGGATGGACGTTATGTTGCAGTGAAAGTCCTAAATAAACTGAAAGATAATGGTGAGGAGTTCATCAATGAAGTTGCAAGTATCAGCAGAACTTCACATGTTAACATTGTTACTCTTCTTGGGTTTTGCTTCGAAGTGCTGAGCGTCGTTCTGATTTTGTTTTCATGGGTTGTGATTGCAGCACAAGGTGGGAAATGTCCATCTTTGATGGAATGCGGAGATATCGGTAACATCACTTTCCCTTTTACGAGCACACAGCACCCTGACTGCGGCATCTTTGTGATACATGGCTGCGATGACCGTGAACCAAATGTCCAAAAAAGCATAAAGAATAAAGAGAGATGGTTTGACATTGTGGACCTTCAACAGTTTACAATCACCATTAGAGATGATAAACTCCATGACATGTTGCTACAAAGAAGTTGCCAGATCTTCGATTACGAGTCTAGTTTCACGGTAGACACGCCTTTGGCTTCTTCTCATATGAAATATAATGTATCCGTCTTCCGATGCAACGATACCACCCATCTTCCGCAATACTATTCTGTTTCTAATGTTACCGCAATATGCAGAAACGATACACGGTATGACATTTCAGGCATCAAGGGTGAAAGTGTTGTGGTGGTCTCCGACGACCCAGACCCCTCCAATAATCTCAAACGATATTGTCCAGAGCTTCAGCTTCCAACGAGCTACCAGGTGAGTCGCAATCTTGATCCGAAGGACCTTTTTAACTTCACGACTGCTGATATCGCCATCGAGATACAACTGTCTCCGGACTGTGTTAGCTGTCACGATATTCATGGAGGCCAATGTCGACTTGACAACGGCGGCAAGTTTTATTGTCATCAAGTTGCATCTGCCTCTGGAGTAGGAGTTTTGATAATCTTGGCTTGGTGCTTTACAAGACGGTTGTTCAACAAGAAAAACCCCACACACCAAGTAATTGAGATGTTTCTAAAAAGCCATGGTCACCTTGCAGCCAAAAGATACAGTTATTTAGAGATAAAGAAGGCTACCAATTCCTTCAAAAACAAATTGGGTCAAGGAGGATATGGTAGTGTATACAAAGGGAAGTTACATGATGGAAGTCTTGTGGCAGTAAAAGTATTAAGTGAATCCAAAGGTAATGGGGAGGAATTCATCAATGAAGTTGCTAGTATCAGTGTCACTTCTCATGTTAACATTGTTAGTTTAGTGGGATTCTGTTTGGAAGGTTCTAAAAGAGCTCTCATATATGAATACATGCCTAATGGATCACTTGAGAATTTCATATATGAAGACAAAGATCCATTAAAGCTCAATCTCTTATTGAGTTGCAAAACTATCTACAACATTGCAATTGGAGTGGCTCGAGGATTAGAGTATTTGCACAAGGGTTGCAATACTAAAATCTTGCACTTTGATATAAAACCTCACAATATATTGTTAGACGAGTATTTCTGTCCCAAAATTTCCGATTTTGGACTTGCAAAAGTATGTCCAAGAAATGAAAGTATTGTGTCCTTATTGGGTACCAGAGGAACTGCTGGATACATTGCTCCTGAATTGTTCTCCAGAAATTTTGGTGGGGTCTCCCACAAATCTGATGTATACAGCTATGGAATGATGGTTTTAGAAATGGTTGGGGGAAGAAAGAATGCCAATGTTGAAGAAGTTGAATGCTCAAGTGAAATATATTTTCCACACTGGGTTTACAAGCGTCTAGAACTCAATCAGGAGCCTAGATTGAGATCCATCAGAAACGCAATTGATAAAGAAATGGTAAGAAAGATGATTATAGTGAGCTTATGGTGCATACAAACTGACCCATCAAATAGGCCAGCAATGAGTAAAGTGGTAGATATGATGGAAGGAAGCTTGGAATCCTTGCAAATACCACCAAAACCTTATCTCTCTTCTCCTCCAAGATCTCCCCCGAGACCATCAGATTATAACACACAGACATCTCAAGCTTTTTATCCTTGA | 4827 | 0.411 | MGQRRTTGQQLLYTQTCILQLQLKPSAHNFLYISLIALQYFPYRTRQVYKMNQKSLLFTPKALYSPLIYSYIILFNLLTRTTLCFVEPKFEACQPRTCGNNQSISYPFYIQGVQEPFCGYPGFGVSCSNDGFPILNLSNTLHIIDQILYQNLSLRVSNAVLSTSNTTTGCPFPTKNLTLPSIFHFVPNQKDVRLFFDCDLPSVPRELQEQIIECSADREKSSVLALYKDDKNLSFASKNCKGEVVDVTVEDDDDDGKGGIEEALRKGFWLNWTASDCRECNSTGEAQPKKKRTKLNLLLGLGIAVALLLLLALNLTFRCLRKQNCATGELFIERFLKQHGSLPTTRYSYSQIKKVTDCFKVKLGEGGYGSVYKGKLQDGSSVAVKVLNELKGTGEEFINEIASISRTSHVNIVTLVGFCFQGSKRALVYEFMPNGSLEKFICEETPMLVGQQLACKTLYDVAIGVARGLDYLHRGCNTKILHFDIKPHNILLDEDFCPKISDFGLAKICPRKESIVSMLGARGTIGYIAPEVFCRTFGGVSHKSDVYSYGMLVLEMVGGRQNKNVELDCSSEIYFPHWIYKKLELDQDFGFRCIENESDRVIVRKMIMVSLWCIQTDPLARPSMSKVVEMLEGSHESLKVPPKPFLRSPPTSPAHYSSSKCPQSFHCGSHGQISFPFTDREHPQCGALLAIHGCHVKDPAAPKTIQLTNTPSKRSFNVLLMGRSSITVNDNDQQKNLENNSCKTFFNNFTLPPLSPLASFYVSNNITMFSLPNTNMSPSFEWPSFLASPSCSAVQVAVKGVPTDNPFDFLAPELLIEVQLSDDCDHCLRQEGGQCQLDIQGKFYCSKGSRGWVVKMVLGLGTGASLSQPSKLVFLIRITSPAVTVALLLVVVKIRYTIWKKQNPTNLLIEIFLKRHGSLQIKRYNYSEIMKVTNSFRNKLGQGGFGSVYKGQLQDGRYVAVKVLNKLKDNGEEFINEVASISRTSHVNIVTLLGFCFEVLSVVLILFSWVVIAAQGGKCPSLMECGDIGNITFPFTSTQHPDCGIFVIHGCDDREPNVQKSIKNKERWFDIVDLQQFTITIRDDKLHDMLLQRSCQIFDYESSFTVDTPLASSHMKYNVSVFRCNDTTHLPQYYSVSNVTAICRNDTRYDISGIKGESVVVVSDDPDPSNNLKRYCPELQLPTSYQVSRNLDPKDLFNFTTADIAIEIQLSPDCVSCHDIHGGQCRLDNGGKFYCHQVASASGVGVLIILAWCFTRRLFNKKNPTHQVIEMFLKSHGHLAAKRYSYLEIKKATNSFKNKLGQGGYGSVYKGKLHDGSLVAVKVLSESKGNGEEFINEVASISVTSHVNIVSLVGFCLEGSKRALIYEYMPNGSLENFIYEDKDPLKLNLLLSCKTIYNIAIGVARGLEYLHKGCNTKILHFDIKPHNILLDEYFCPKISDFGLAKVCPRNESIVSLLGTRGTAGYIAPELFSRNFGGVSHKSDVYSYGMMVLEMVGGRKNANVEEVECSSEIYFPHWVYKRLELNQEPRLRSIRNAIDKEMVRKMIIVSLWCIQTDPSNRPAMSKVVDMMEGSLESLQIPPKPYLSSPPRSPPRPSDYNTQTSQAFYP. | 1609 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g08172 | 1608 | Pfam | Protein kinase domain | 361 | 629 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g08172 | 1608 | Pfam | Protein kinase domain | 1297 | 1568 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g08172 | 1608 | ProSiteProfiles | Protein kinase domain profile. | 1294 | 1585 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g08172 | 1608 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 1266 | 1591 | IPR045874 | GO:0004672 | |
Seca7g08172 | 1608 | SUPERFAMILY | Protein kinase-like (PK-like) | 918 | 999 | IPR011009 | - | |
Seca7g08172 | 1608 | ProSitePatterns | Protein kinases ATP-binding region signature. | 363 | 385 | IPR017441 | GO:0005524 | |
Seca7g08172 | 1608 | Pfam | Wall-associated receptor kinase galacturonan-binding | 93 | 157 | IPR025287 | GO:0030247 | |
Seca7g08172 | 1608 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1369 | 1579 | - | - | |
Seca7g08172 | 1608 | Gene3D | Transferase(Phosphotransferase) domain 1 | 432 | 641 | - | - | |
Seca7g08172 | 1608 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1418 | 1430 | IPR008271 | GO:0004672|GO:0006468 | |
Seca7g08172 | 1608 | ProSiteProfiles | Protein kinase domain profile. | 357 | 638 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g08172 | 1608 | FunFam | serine/threonine-protein kinase PBS1-like | 333 | 431 | - | - | |
Seca7g08172 | 1608 | SMART | serkin_6 | 1294 | 1570 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g08172 | 1608 | SMART | serkin_6 | 357 | 638 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g08172 | 1608 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1300 | 1322 | IPR017441 | GO:0005524 | |
Seca7g08172 | 1608 | MobiDBLite | consensus disorder prediction | 1578 | 1608 | - | - | |
Seca7g08172 | 1608 | FunFam | serine/threonine-protein kinase PBS1-like | 1265 | 1368 | - | - | |
Seca7g08172 | 1608 | Pfam | Protein tyrosine and serine/threonine kinase | 936 | 1005 | IPR001245 | GO:0004672|GO:0006468 | |
Seca7g08172 | 1608 | SUPERFAMILY | Protein kinase-like (PK-like) | 341 | 632 | IPR011009 | - | |
Seca7g08172 | 1608 | FunFam | PR5-like receptor kinase | 432 | 643 | - | - | |
Seca7g08172 | 1608 | Pfam | Wall-associated receptor kinase C-terminal | 218 | 283 | IPR032872 | - | |
Seca7g08172 | 1608 | Gene3D | Phosphorylase Kinase; domain 1 | 336 | 431 | - | - | |
Seca7g08172 | 1608 | Gene3D | Phosphorylase Kinase; domain 1 | 913 | 1006 | - | - | |
Seca7g08172 | 1608 | Gene3D | Phosphorylase Kinase; domain 1 | 1271 | 1368 | - | - | |
Seca7g08172 | 1608 | FunFam | PR5-like receptor kinase | 1369 | 1582 | - | - | |
Seca7g08172 | 1608 | SUPERFAMILY | Protein kinase-like (PK-like) | 1275 | 1570 | IPR011009 | - | |
Seca7g08172 | 1608 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 480 | 492 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g08172 | Seca-Chr7 | 186206367 | 186222810 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g08172 | 661 | 998 | Receptor kinase-like Gene Family | AT5G38260 | 30.208 | 7.69e-28 | 119 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Seca7g08172 | Pkinase | 1.8e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g08172 | - | - | mtr:11418569 | 947.962 |