Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08166 ATGGCCTCATCCCTTTTCATTTTCAAATCATTAATTTTCTCCCACCTTCTTCTTGTTTCGGCTGAAGGCTCAAAGTGTCCACAGTCTTTTGATTGTGGAAGTCTTGGGCAGATAAGCTTCCCTTTCACAGACAGGGAGCACCCACAATGTGGCGCGTTAGCCATACATGGTTGTCATGATAAGGATCCAGCTGCTCCCAAAACCATCCAACTAACCAACACGCCATCAAAACGGTCTTTTAAAGTTATCCTCATGGGTCGTTCTACCATAGCGGTCAGAGATAATGATCAAGACAAAAATTTGGAGAACAAGAGTTGCAAAGCCTTCTTCAACAATTTTACTCTTCCTCCCCCCTCACCTTTAGCTTCTTTCTACATAGGAAATAACATAACTATGTTCAGGTGCAATAACTCCCTTAATGTCACCCTTCCCATATCATTTCATAACTATTCAAACTCAAACTGTTCTGGTGGTTATAATATCTACTACTATAGCCTTCCAAATACTAAGATACCTCCCGGTTTCAAATGGCCAAGCTTTTTGGCATCCTCAGCGTGTTCAGCGGTTCAGGTTGCAGTAAGAGATGATCCAACTGATAACCCCTTTGATTTTCTAGTTTCTGAGCTCAACATTCATGTACAGTTATCTGATGATTGTAACCATTGTCTTCGTCAAGAAGGGGGACAATGTCAACTTGACATTCAAGGAAAATTCTATTGCGCAAAAGATTTCTTCTCCTTTATTGGCTTATTTATTATAGGTATTGGACTCCCTAGCATTATTATAACTGGGTTGTTGATCATATGGCACTATAAACGAAGACATGTTCCAGATTTTCCAGACCCAGAGAGGGGCAGTAATAGTGTCTGCTTCGGGATCCCAATCTTCTCCTATAAGGATCTTCAAGTAGCCACAAAAAATTTCGACCGTTCAAGAGAACTTGGAGAAGGCGGATTTGGGATTGTTTTCTATGGAAAACTCAAAGATGGACGTGAAGTTGCTGTGAAGCGCCTATATGAGCACAACTATAGGCGAGTAGAACAGTTTGTGAATGAAGTCAATATCCTCACTCGCTTGCGCCACAGAAATTTAGTGTCCCTTTATGGCTGCACATCACGTCACGGCCATGAACTATTGCTTGTATATGAATACATTCCGAATGGTACTGTCGCCAGTCATCTCCGTCGTGAATCAAAATTGGCTTTTCAGTGCTTGCAAAGGGACAAGGAATTGAGGCCATCTATGGATGAGGCTGTGGAGGTGCTGAGGAGAATTGAAAGTGGGGAGGATGAAGAAGAAGTAATTTCTCATGGTGATGTTGTACATCCACTATCACCATCTTCGCCAGATCATGATGAGGTGAAACTGTTAACAGCTTCACCCAAGGCTGTCACAGATAAATGGGGAAGTGACTCCACTACTCCTAATTTGAGGATGTCTCTGATTTATTATGGTGGACATGTAACTGTGCTGCTTCTGCTTCTGCTTCTCTCAGTCTCAGCTGATGATGATTGCCCAGAGTCATTTGATTGCGGAAGTCTAGGGATGATTCACTTCCCTTTTACCAAGGCAGAACGCGGGGACTGTGGTTTATTGGCAATCCACGGTTGTGATGATCACCATCTTAACAAAACTGTCCGATTAACCAATGGAGGAAAACCGCTTCAAGTTAGAAAAATTGACAGCCGCTGGTCCAACAGAATTACCATTTTTGACCAGGATTTCCGCAAGGTTTTGCTGCGAAATGCTTCCTGTGAGGCCTTCAGCTATAACATTACTCTCCCTCCTCCCTCTCCTTTCGGTTATTTTTTTGTGAAAGACAATTTAACTACCTTCAAATGCAACCGCACCCTCAAAGACAAAGAGATCAGTACTCCAATTAATTTCTTCAAAAACAACACGTGTCCTCCTCCCTATGATTTCTACTTCGGCCATCCAGTCTCTGATGATGACTCTTTAGCGCCGTGGTGTTCACTCTTTCACCTCCCTCTCATCCAAGGTTTTGCCTTATCCGGAAATCCATTTCCATTCTTAACTGATGAAATTACCTTTCAATTCGAATATTCAGATTACTGTAACCAGTGCTACCATAAACAAGGCAGGTGCCGTCTTGAGACCAACGGAAAACTTTATTGCGCCAAAAGAAAGGATAGAAGTTTAGCTTGGAAGCTAGGAATGGCGCTAGGCATCGGTGTTGGACCATGGATCATATTTGGGTTGTTCCTCACCTTACGGTACTACAAACGGAAACATTTTACTGCACACGCCCAACTCCAATCATGCAACACTTGTGCTGATCCTCACCCAAATGGTGACACACAGACTGAAATGGTCTTCTTTGGGGTACCTGTCTTCTCCTTTAAGGAGCTTCAAGAAGCAACAAACAATTTTGACCGCATTAGAAAGCTAGGAGATGGAGGTTTTGGCACTGTTTACTACGGAAAACTTAAAGATGGAAGAGAAGTTGCAGTCAAGCACCTATTTGAGCACAATTACAGGAGAGTGGAACAGTTTATAAATGAAATTGAAGTCCTGACTCGGTTGCGCCACAGAAACCTTGTGTCCCTTTATGGCTGCACTTCACGTCACAGCCGTGAGCTACTGCTTGTATATGAATACATTCCAAATGGCACAGTTGCAACAAAAAAGATTAGAAATGCTGCACTTGCTGAGCTGGTAGACCCATCCTTTGGTTTTGAGTCAGATCATGAAGTTAAAAGAATGGTAACTTCAGTGGCAGAATTGGCTTTTCAGTGTGTGCAAGGAGACAAGGAATTAAGACCTTCCATGGAGGAAATTCTGAAAGCACTCAGGAAAATTGAAGGTGGGAAATATGAGTTTGAGTCTGAGAATCTAGAGAGCGGAGATGATGTTGCTGGGAGTGGGATCTCTTCCACCGAAAAAGTTCATTCACGCTCATCAGACAGCGGTCAAGGTGGAATTTTTATGAATAACAAGCTACCATCTTCTCCAAAATCCTTCACTGAGAAATGA 2994 0.4269 MASSLFIFKSLIFSHLLLVSAEGSKCPQSFDCGSLGQISFPFTDREHPQCGALAIHGCHDKDPAAPKTIQLTNTPSKRSFKVILMGRSTIAVRDNDQDKNLENKSCKAFFNNFTLPPPSPLASFYIGNNITMFRCNNSLNVTLPISFHNYSNSNCSGGYNIYYYSLPNTKIPPGFKWPSFLASSACSAVQVAVRDDPTDNPFDFLVSELNIHVQLSDDCNHCLRQEGGQCQLDIQGKFYCAKDFFSFIGLFIIGIGLPSIIITGLLIIWHYKRRHVPDFPDPERGSNSVCFGIPIFSYKDLQVATKNFDRSRELGEGGFGIVFYGKLKDGREVAVKRLYEHNYRRVEQFVNEVNILTRLRHRNLVSLYGCTSRHGHELLLVYEYIPNGTVASHLRRESKLAFQCLQRDKELRPSMDEAVEVLRRIESGEDEEEVISHGDVVHPLSPSSPDHDEVKLLTASPKAVTDKWGSDSTTPNLRMSLIYYGGHVTVLLLLLLLSVSADDDCPESFDCGSLGMIHFPFTKAERGDCGLLAIHGCDDHHLNKTVRLTNGGKPLQVRKIDSRWSNRITIFDQDFRKVLLRNASCEAFSYNITLPPPSPFGYFFVKDNLTTFKCNRTLKDKEISTPINFFKNNTCPPPYDFYFGHPVSDDDSLAPWCSLFHLPLIQGFALSGNPFPFLTDEITFQFEYSDYCNQCYHKQGRCRLETNGKLYCAKRKDRSLAWKLGMALGIGVGPWIIFGLFLTLRYYKRKHFTAHAQLQSCNTCADPHPNGDTQTEMVFFGVPVFSFKELQEATNNFDRIRKLGDGGFGTVYYGKLKDGREVAVKHLFEHNYRRVEQFINEIEVLTRLRHRNLVSLYGCTSRHSRELLLVYEYIPNGTVATKKIRNAALAELVDPSFGFESDHEVKRMVTSVAELAFQCVQGDKELRPSMEEILKALRKIEGGKYEFESENLESGDDVAGSGISSTEKVHSRSSDSGQGGIFMNNKLPSSPKSFTEK. 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08166 997 Gene3D Phosphorylase Kinase; domain 1 283 384 - -
Seca7g08166 997 Gene3D Phosphorylase Kinase; domain 1 769 873 - -
Seca7g08166 997 SUPERFAMILY Protein kinase-like (PK-like) 285 398 IPR011009 -
Seca7g08166 997 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 880 996 IPR044652 GO:0004672
Seca7g08166 997 Pfam Protein tyrosine and serine/threonine kinase 800 880 IPR001245 GO:0004672|GO:0006468
Seca7g08166 997 Pfam Protein tyrosine and serine/threonine kinase 311 402 IPR001245 GO:0004672|GO:0006468
Seca7g08166 997 ProSitePatterns Protein kinases ATP-binding region signature. 803 825 IPR017441 GO:0005524
Seca7g08166 997 FunFam receptor-like protein kinase FERONIA 766 873 - -
Seca7g08166 997 MobiDBLite consensus disorder prediction 958 997 - -
Seca7g08166 997 ProSiteProfiles Protein kinase domain profile. 308 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g08166 997 SUPERFAMILY Protein kinase-like (PK-like) 774 881 IPR011009 -
Seca7g08166 997 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 282 384 - -
Seca7g08166 997 ProSiteProfiles Protein kinase domain profile. 797 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g08166 997 MobiDBLite consensus disorder prediction 951 997 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08166 Seca-Chr7 186159978 186173827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08166 878 997 Receptor kinase-like Gene Family AT1G25390 32.000 2.10e-14 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Seca7g08166 PK_Tyr_Ser-Thr 2.8e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08166 - - aprc:113871895 453.751