Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08165 ATGGTTGACCAGAAAACAATTACGCTTTTTGATGAAGGTTTTCACAAGCGTTTGCAAGACAATAGTTGTGACACTTTGCAAAATAATTACACCCTTCCTTCCCCTTCTCCTTTGGTTTCTTTTTATATAAAATATAACGTAACCCTGTTCCGATGCAAACGGAGCCTCAAAATCAAGCCCCCTAAAGATTATTTTCGTCACAATTGCAGTGACTACGAATACGATGTCTATTATGACAGCCATGCTCCCTATCCGAATGAGGAGGCTCGTAGGCTTTTCTCATCCTGCTCCGTTCTTCAGTATCCAACAAAAGACGTAACTGATACCAAAGACATTCTATCTTTTGTATCTGCTCAATTGGTTGTTGAAGTTGTATTATCTGCTGATTGTGATGACTGCTGCAACCACAGAGAAGGCCAATGTCAGCTTGACAGCAATAAAAAGTTCTACTGTGACCAAATTAAAAAATTTATTTATTTAACTTCTGCTTCTGCAGAGCCAAAGAAGATGACAAAAATTTTGAAGCTGCTGCTAGGACTTGGAATAGGTTTAGGGATTACACTGTCAGCATCAATCTTTCTGATAATTAGGTGCCTATACAGACGAAAGCATGCACCCTCAGCCTCAGATCAGCAAAACCAATCAAGAAAAATACATACTGATATAATTGATCCTTACCAAAATCCAGAACCAGAAAATAGCTTTGTCTACTTTGGAATCCCTCTCTTCTCTTACAAGGAGCTTGAAGAAGCCACAAATAATTTCCACCACAGCAACCAACTTGGAAGTGGAGGCTTTGGAACAGTTTACTATGGAAAACTTCAAGATGGAAGGGAAGTTGCTGTGAAGCGCCTATATGAGCACAACCACAGGCGAGTACAACAGTTCACAAATGAAATTGAGATCCTTACTCGCATGCGCCATACAAATCTTGTGTCCCTCTATGGGTGCACTTCACGTCGCAGTCATGAACTACTTCTTGTCTACGAATATGTTCCAAATGGCACTGTTGCTTGTCATCTCCATGGTGATTTAGCAGCCACACTTCCTTGGCATGTAAGAATGAAAATTGCTATTGAGACCGCCAGTTCATTGGCTTATCTTCATGCTTCTAACATCATCCACCGTGATGTCAAAACCAAAAACATTCTCCTTACCGACACTTTCAGTGTCAAAGTTGCAGATTTTGGCCTTTCAAGGTTATTCCCTAATGATGTCACACATGCCTCCACAGCACCACAGGGGACTCCAGGTTATGTGGACCCTGAATATCACCACTGCTACCAGCTTACTAGCAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTCATTGAGCTAATATCATCTAAGCCTGCTGTTGATATGAGCAGGCATAGGGATGAGATTAACTTGGCAAATCTGGCTATAAGGAAGATTCAGAAAAGTGCATTTGGTGAGCTGGTAGATCCTTCTCTTGGTTTTGATTCAGACAATGAGGTTAAGAGGATGATCGTCTCGGTGGCAGAATTGGCTTTTCAATGTTTGCAAAGGGACAAGGAATTGAGACCTTCCATGGATGAGGTTTTGAAGGTGCTGATTAGAATTGAAAGTGGGAAGGATGTAGCTGAGCATCTAGAGGAGGAAGATGTAAGAACACCCTCTCCACCTTCACCTGATTGGGATGAGATTGAATTATTGAAAAGAATGATGATACCTCCTTCACCAAAAGCCGTGACTGATAGATGGGATAGTAAATCTACTACACCTAATGCCAGTGGTTAA 1761 0.414 MVDQKTITLFDEGFHKRLQDNSCDTLQNNYTLPSPSPLVSFYIKYNVTLFRCKRSLKIKPPKDYFRHNCSDYEYDVYYDSHAPYPNEEARRLFSSCSVLQYPTKDVTDTKDILSFVSAQLVVEVVLSADCDDCCNHREGQCQLDSNKKFYCDQIKKFIYLTSASAEPKKMTKILKLLLGLGIGLGITLSASIFLIIRCLYRRKHAPSASDQQNQSRKIHTDIIDPYQNPEPENSFVYFGIPLFSYKELEEATNNFHHSNQLGSGGFGTVYYGKLQDGREVAVKRLYEHNHRRVQQFTNEIEILTRMRHTNLVSLYGCTSRRSHELLLVYEYVPNGTVACHLHGDLAATLPWHVRMKIAIETASSLAYLHASNIIHRDVKTKNILLTDTFSVKVADFGLSRLFPNDVTHASTAPQGTPGYVDPEYHHCYQLTSKSDVYSFGVVLIELISSKPAVDMSRHRDEINLANLAIRKIQKSAFGELVDPSLGFDSDNEVKRMIVSVAELAFQCLQRDKELRPSMDEVLKVLIRIESGKDVAEHLEEEDVRTPSPPSPDWDEIELLKRMMIPPSPKAVTDRWDSKSTTPNASG. 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08165 586 MobiDBLite consensus disorder prediction 565 586 - -
Seca7g08165 586 FunFam Wall-associated receptor kinase-like 20 332 538 - -
Seca7g08165 586 Gene3D Phosphorylase Kinase; domain 1 228 331 - -
Seca7g08165 586 ProSitePatterns Protein kinases ATP-binding region signature. 261 283 IPR017441 GO:0005524
Seca7g08165 586 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 21 580 IPR044652 GO:0004672
Seca7g08165 586 SMART serkin_6 255 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g08165 586 ProSiteProfiles Protein kinase domain profile. 255 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g08165 586 Gene3D Transferase(Phosphotransferase) domain 1 332 546 - -
Seca7g08165 586 FunFam receptor-like serine/threonine-protein kinase NCRK 232 331 - -
Seca7g08165 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 373 385 IPR008271 GO:0004672|GO:0006468
Seca7g08165 586 CDD STKc_IRAK 261 528 - -
Seca7g08165 586 Pfam Protein kinase domain 255 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g08165 586 SUPERFAMILY Protein kinase-like (PK-like) 232 525 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08165 Seca-Chr7 186149376 186151805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08165 6 586 Receptor kinase-like Gene Family AT1G25390 49.662 7.11e-176 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Seca7g08165 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08165 - - gmx:100791822 817.764