Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g08155 | ATGTTCCCCTTTGTTTTGCTGTTTTTTCTTCTCTGCTGCAATTCTCTTGCACCTGTGGTGAATTCTCTGAACGCTGAAGGCTATGTGCTTTTGACGCTAAAGCAATCCATCACAGACCCACAAGGGTCTATGAGTAACTGGAATTCTTCTGATGACAACCCTTGTTCCTGGAATGGGATTACTTGCAAGGACCAAACTGTGGTGTCCATTAGTATCCCAAAGAGGAAACTTTATGGCTCTCTTCCTTCTACTCTAGGATCTCTTTCCCAGCTCCGCCATGTCAACTTCAGGAACAACAAGCTCTTTGGAAGCTTGCCTGTGCAGCTCTTTCAAGCTCAGGGACTGCAAAGTTTGGTGCTTTATGGCAATTCATTCTCTGGGTCTGTTCCAAATGAGATTCAGAAACTCAGGTACCTTCAAACTCTAGATTTATCCCAGAATTTCTTCAATGGGTCATTGCCTGCTTCAGTTGTCCAATGCAAGAGGCTCAAAACCCTTATTCTGAGTCGAAACAATTTCACTGGTCCTTTGCCAGATGGATTTGGTACTGGTTTGTTTTCTCTGGAAAAACTGAACCTTTCTTTCAATCAATTTAATGGTTCAATTCCTAGTGACATGGGAAATCTATCTAGCCTGCAAGGAACTGTTGATTTGTCTCATAATCATTTTAGTGGTTCCATCCCAGCCAGCCTTGGCAATCTACCTGAGAAGGTTTACATTGATCTTACTTACAACAATTTAAATGGCCCAATACCTCAAAATGGTGCTTTAATGAACAGAGGACCAACTGCTTTCATTGGCAATCCTGGTCTATGTGGCCCACCTTTGAAGAACCCATGTGGCTCTGATACTCCAGCTGCTAGTTCACCTTCCTCATTTCCATTTCTTCCTGATAACTACTCACCTCAGGATGCTGGTAATGGTTCTAGGAAAAGTGAAAAAAACAAAGGGCTAAGTAAGGGTGGTGTGATTGGCATTGTTGTGGGTGATTTAGTTGGAATTTGCCTTTTAGGTTTGCTGTTCTCTTACTTTTACTCAAGGGTTTGTGGTTTTAACCAGGATCAGGATGAAAATGGTGTTAGTAAGGGAAGGAAAGGAAGGAAAGAGTGTTTGTGCTTCAGAAAGGATGAATCTGAGGCCTTATCTGATAATGTTGAGCAATATGATCTTGTCCCATTAGATAGCCAAGTGGCATTTGATTTGGATGAGCTTCTTAAGGCTTCAGCTTTTGTTCTGGGTAAGAGTGGAATAGGGATTATGTACAAAGTGGTGCTTGAAGATGGACTTGCTTTGGCAGTGAGAAGATTAGGGGAAGGAGGTTCTCAGAGGTTTAAAGAGTTCCAAACAGAAGTAGAAGCTATAGGAAAATTAAGGCATCCAAATATTGTGAGACTGAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATATATGATTATATACCCAATGGAAGCCTTGCTACAGCAATTCATGGTAAGTTTCATTAA | 1491 | 0.4158 | MFPFVLLFFLLCCNSLAPVVNSLNAEGYVLLTLKQSITDPQGSMSNWNSSDDNPCSWNGITCKDQTVVSISIPKRKLYGSLPSTLGSLSQLRHVNFRNNKLFGSLPVQLFQAQGLQSLVLYGNSFSGSVPNEIQKLRYLQTLDLSQNFFNGSLPASVVQCKRLKTLILSRNNFTGPLPDGFGTGLFSLEKLNLSFNQFNGSIPSDMGNLSSLQGTVDLSHNHFSGSIPASLGNLPEKVYIDLTYNNLNGPIPQNGALMNRGPTAFIGNPGLCGPPLKNPCGSDTPAASSPSSFPFLPDNYSPQDAGNGSRKSEKNKGLSKGGVIGIVVGDLVGICLLGLLFSYFYSRVCGFNQDQDENGVSKGRKGRKECLCFRKDESEALSDNVEQYDLVPLDSQVAFDLDELLKASAFVLGKSGIGIMYKVVLEDGLALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIVRLRAYYWSVDEKLLIYDYIPNGSLATAIHGKFH. | 497 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g08155 | 496 | ProSiteProfiles | Protein kinase domain profile. | 406 | 496 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g08155 | 496 | MobiDBLite | consensus disorder prediction | 282 | 308 | - | - | |
Seca7g08155 | 496 | Pfam | Protein tyrosine and serine/threonine kinase | 427 | 492 | IPR001245 | GO:0004672|GO:0006468 | |
Seca7g08155 | 496 | Gene3D | Ribonuclease Inhibitor | 17 | 76 | IPR032675 | - | |
Seca7g08155 | 496 | Gene3D | Ribonuclease Inhibitor | 77 | 283 | IPR032675 | - | |
Seca7g08155 | 496 | Pfam | Leucine rich repeat N-terminal domain | 24 | 62 | IPR013210 | - | |
Seca7g08155 | 496 | SUPERFAMILY | L domain-like | 25 | 277 | - | - | |
Seca7g08155 | 496 | Gene3D | Phosphorylase Kinase; domain 1 | 375 | 481 | - | - | |
Seca7g08155 | 496 | PANTHER | OS05G0588300 PROTEIN | 133 | 492 | - | - | |
Seca7g08155 | 496 | FunFam | Leucine-rich repeat receptor-like protein kinase | 187 | 282 | - | - | |
Seca7g08155 | 496 | SMART | LRR_typ_2 | 185 | 209 | IPR003591 | - | |
Seca7g08155 | 496 | SMART | LRR_typ_2 | 136 | 160 | IPR003591 | - | |
Seca7g08155 | 496 | SMART | LRR_typ_2 | 88 | 112 | IPR003591 | - | |
Seca7g08155 | 496 | MobiDBLite | consensus disorder prediction | 277 | 316 | - | - | |
Seca7g08155 | 496 | FunFam | Leucine-rich repeat receptor-like protein kinase | 389 | 481 | - | - | |
Seca7g08155 | 496 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 23 | 183 | - | - | |
Seca7g08155 | 496 | SUPERFAMILY | Protein kinase-like (PK-like) | 411 | 493 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g08155 | Seca-Chr7 | 186061304 | 186062794 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g08155 | 1 | 494 | Receptor kinase-like Gene Family | AT2G01210 | 68.410 | 0.0 | 687 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Seca7g08155 | PK_Tyr_Ser-Thr | 2.5e-05 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g08155 | - | - | gmx:100792873 | 875.93 |