Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08141 ATGGAGAAAGTTTGTGAATTCTGCACAGCTTTGAGGCCGCTTGTTTACTGTAAGGCTGATGCAGCATATCTTTGTCTATCCTGTGATGCAAAGGTCCATTTGGCAAATGCATTGTCTGGTCGCCACCTCAGGACTCTTGTGTGTAACTCATGCAGATATCGATTTGCTTATGTTCAGTGCTTGGACCACAAAATGTTAATCTGTCGAGACTGTGATCAAAAGCTGCACACTGTTTCTTTACCACATCAGAAACGAGCTATCAGAACTTTCATGGGCTGCCCTTCTGCCAAAGACTTTGCAACACTCTGGGGTTTTGAATTGAATGAGATTGAAAGCAGTGTCAATCAGGATCAGTTTGCATCTACTTCTTGTGTTTCTTCAAATTTGAATGTGGTAAAAGTCTCAGGAGGAAAGTCTGGCATACAAACTGGGGTCCTTTCAATGGTATCTAAGGTCAAACTTGATGGGGGATCGGGTAGTCAACAAGGCCAGATATTGTACTGTGATCAAGAGAGACAAATTATTCTGCAGCAGATTGTTGATTTAAAGCAATTTCAGCTAAATGAGGAGAGTGATCATTCTACAAAGATAAATGGGTTACAAGAAAAAGACTTATCTCCTTCAGTATATCATACTCTTAAGAAATTGGATGAAAAATTCAATCAGCAAGCACAAAACTCCCAGGATCTTGCTACTAATCTTCTGGAAGAAGACAGTCCCATTGTGGAGCAGAATCCCGAAACTTTCTCTTCTGCGTTTTCTCAACTTGATAATTTGTCTTCATCTTCAGTTATAGACCTTCCCTTGCATGGAGAATTGTTTTGGTCATGCAAAAGTCCACTTAAAAGTAATCAGGTCAGATACTTACATGTCACTGTTGTGAGCCACAGTTGGACCACTGGTTTTATTCACTGTTCTTCTAGATGTTAA 930 0.4011 MEKVCEFCTALRPLVYCKADAAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYRFAYVQCLDHKMLICRDCDQKLHTVSLPHQKRAIRTFMGCPSAKDFATLWGFELNEIESSVNQDQFASTSCVSSNLNVVKVSGGKSGIQTGVLSMVSKVKLDGGSGSQQGQILYCDQERQIILQQIVDLKQFQLNEESDHSTKINGLQEKDLSPSVYHTLKKLDEKFNQQAQNSQDLATNLLEEDSPIVEQNPETFSSAFSQLDNLSSSSVIDLPLHGELFWSCKSPLKSNQVRYLHVTVVSHSWTTGFIHCSSRC. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08141 309 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Seca7g08141 309 CDD Bbox1_BBX-like 4 47 - -
Seca7g08141 309 SMART bboxneu5 1 47 IPR000315 GO:0008270
Seca7g08141 309 SMART bboxneu5 48 87 IPR000315 GO:0008270
Seca7g08141 309 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08141 Seca-Chr7 185912854 185917919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08141 1 291 C2C2-CO-like Transcription Factor Family AT1G68190 35.495 3.21e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08141 - - gmx:100819787 456.832