Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g08136 | ATGGGTTTGCAAAACCAGTTAAACGACGTGTCGTCGGATTCGATTCCGCTGCTCGTCTTGGCGCAAATCGCCACCTGCGTCAGCTACCTTCGCTCCATGCTCCTCGCTCTCCTCCAATCACTCGGTCTCTGCAGGTTCTACACCGACCAGATCGTTGACGACAGCTTCTTCGCCGCCGTTGGATCCGGCCTCGCCGGAATCATCATGCTCTCCGATCAGCTCACCCTCAACAACAAATTCTTCTACGAGAAAGGCGCCACCGATGACGACCAGGACTGCGTTGTGTGCAAAACCACCTTCAAGGACGGAGACCACGTTCGGATGCTTCCTTGCCGCCATGTCTACCACCGCCGATGCTTCGACGGATGGCTCCACCAGTACAAGTTCAACTGTCCCATCTGCCGCTACAATCTCATCTCTGACGAGCGCGTGGCTCTCACGGAGCGCCGTGTCGGTAGCCAACTCATCTCCTGGTTTTCCCTGCGCTGA | 489 | 0.5685 | MGLQNQLNDVSSDSIPLLVLAQIATCVSYLRSMLLALLQSLGLCRFYTDQIVDDSFFAAVGSGLAGIIMLSDQLTLNNKFFYEKGATDDDQDCVVCKTTFKDGDHVRMLPCRHVYHRRCFDGWLHQYKFNCPICRYNLISDERVALTERRVGSQLISWFSLR. | 163 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g08136 | 162 | CDD | RING-H2_RNF103 | 87 | 141 | - | - | |
Seca7g08136 | 162 | ProSiteProfiles | Zinc finger RING-type profile. | 93 | 135 | IPR001841 | - | |
Seca7g08136 | 162 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 80 | 150 | IPR013083 | - | |
Seca7g08136 | 162 | SMART | ring_2 | 93 | 134 | IPR001841 | - | |
Seca7g08136 | 162 | SUPERFAMILY | RING/U-box | 79 | 141 | - | - | |
Seca7g08136 | 162 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | 81 | 146 | - | - | |
Seca7g08136 | 162 | Pfam | Ring finger domain | 92 | 135 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g08136 | Seca-Chr7 | 185850100 | 185850588 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g08136 | 1 | 161 | C3H Transcription Factor Family | AT1G15100 | 49.383 | 2.01e-48 | 152 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g08136 | K16282 | - | gmx:100797628 | 246.514 |