Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08072 ATGGCGTCCGCCATGGCAGTATGGCGCTTAAAGGTCCTTGCCGCCATCCGCCGTATAACCTTACTGACAACACTGCTACCATGTGTGTTGTTCTCAACCAAAAAGCATCCGAGAACAAAAGATCTTTTGCCAGAAGATTTTTGGTTTAGTGCACCAAAGAAGGGAGTGATGGTCTTTGCTTTGCCTGGAGAGCCTGGTCTTACAGAGTTGGCTGGGGACTTCAAAATCCATTTTCATGATCGCCAAGGAGATTTTTACTGTTGGTTGAACACAACAATGACAGAAAATAGGAAAATTTTGAACACCAGTGATCTCGATGGCTTTGACAAGAGAAAATTGCCTTCTCCAGGATTCCTGGTTGAGGTTGTGCTAGTGGATTATAATGATAATGTTGCAACTTCCAAACCTGAAACTATTACAAAGAAATCAGATGAGAGTTCAAGTAACAGTCCAGCCAGTCCCACCCCAGTTGAAGTGAGCTCCCCTGTGTTGAATGCGGACAAAGAGTCAGGGGGTCATGATAAAGATGATGTGTTTTCAGATGGTGAGGCAGAGCATCCTGCTTCAAGAAGCAAGCAAACAAAAGCATCTTCTGAAACAGTTGCAAATGCAACCAGAGAGTCTGAGTCAAACAAAATTTCAAATCAAATTGCGAATTTAACAAATGCAACAGAACAAGTTTCTCTGGGAAATAAGATCTCTGCGCCAATTCATAGTGCTGGTGAGCCAAAAAGTGATGTTGATGGAAGAACAGTGTCCAGCTCAGAAAGTGAGTTTAAGGCCATGGCTGCAGATGCTTCTGTTTTTACTTTCGGAGATGATGAAGATTACGAAAGTGATTGA 843 0.4282 MASAMAVWRLKVLAAIRRITLLTTLLPCVLFSTKKHPRTKDLLPEDFWFSAPKKGVMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMTENRKILNTSDLDGFDKRKLPSPGFLVEVVLVDYNDNVATSKPETITKKSDESSSNSPASPTPVEVSSPVLNADKESGGHDKDDVFSDGEAEHPASRSKQTKASSETVANATRESESNKISNQIANLTNATEQVSLGNKISAPIHSAGEPKSDVDGRTVSSSESEFKAMAADASVFTFGDDEDYESD. 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08072 280 ProSiteProfiles C2 tensin-type domain profile. 1 127 IPR014020 -
Seca7g08072 280 SMART PTEN_C2_2 9 126 IPR014020 -
Seca7g08072 280 MobiDBLite consensus disorder prediction 231 258 - -
Seca7g08072 280 MobiDBLite consensus disorder prediction 135 160 - -
Seca7g08072 280 MobiDBLite consensus disorder prediction 135 219 - -
Seca7g08072 280 MobiDBLite consensus disorder prediction 168 192 - -
Seca7g08072 280 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 29 234 - -
Seca7g08072 280 MobiDBLite consensus disorder prediction 193 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08072 Seca-Chr7 185208451 185210315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08072 29 280 Protein tyrosine phosphatase (PTP) family AT3G19420 61.069 7.96e-93 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08072 K01110 - gmx:100784003 404.831