Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08071 ATGGCAATCTTCCAGCATCATCACAATGACCAATTAGAACATAATGAAAACGTTTCATCTGTCCTTGATGCTCTTTACTGTGATGAAGGAAAATGGGAAGAGGAAGAAGAAGAAGGTGACTTATCTGAAGCAAGTGATGTGACAACTAACAATATTGATGATGGGGTGCACCACCAAGACACTACAAGTTCTTCTCTTTCCCCTCTTCTCTTGTTGGAGCAAGACTTGTTCTGGGAAGATGAAGAACTTCACTCTCTCTTCTCCAAAGAGAAGATTCAACAACAAACCTATCACGATCTGAATTTAGACCCTTCTCTCTCTCAACCTCGTCATGAGGCAGTTGAATGGATGCTTAAAGTCAATGCTCATTATGGATTCTCTGCTCTCACTGCAACACTTGCTGTTACTTACCTGGATACATTCCTTTCAAGCTTCCATTTTCAAAGGGAGAAGCCATGGATGATCCAGCTTGTGGCTGTCACTTGCATCTCTTTGGCTGCAAAAGTTGAAGAAACTCAAGTGCCTCTTCTCTTAGACCTTCAAGTGCAAGACGCCAAATATGTGTTTGAGGCAAAGACTATTCAGAGAATGGAGTTGCTGGTTCTCTCCACCCTCAAGTGGAAGATGCATCCTGTGACCCCACTCTCCTTTCTAGATCACATTATAAGAAGGCTTGGATTGAAAACCCATCTTCACTGGGAGTTTCTCAGGCGCTGTGAGCATCTTCTTCTATCTGTGCTTTTAGATTCAAGATTTGTTGGTTGTCTTCCTTCTGTATTGGCCACTGCAACAATGCTGCATGTTATAGATCAGATTGAGAAGAGTGATGGGGTGGAATACAAAAATCAGCTTCTGGGTGTTCTCAAAATTAACAAGGTTAGTGTCCATAAAGTAGATGAATGTTATAATGCAATTCTCCAACTCTCAAATGGCAATAATTATGGTAATAACAACCCTAGTAAGCGCAAGTATGAGCAAATTCCTGGCAGCCCAAGTGGTGTAATTGATGCTGCTTTTAGCTCTGATGGTTCCAACGATTCGTGGGCAGTGGGGTCATCATTATATTCATCTCCAGAGCCTCTGTTTAAGAAGAGCAGAAACCAAGGACAACAAATGAAATTGTCACCACTTAACCGGGTCATTGTCGGAATTGTTGGCAGCTCCCCCTAA 1170 0.4222 MAIFQHHHNDQLEHNENVSSVLDALYCDEGKWEEEEEEGDLSEASDVTTNNIDDGVHHQDTTSSSLSPLLLLEQDLFWEDEELHSLFSKEKIQQQTYHDLNLDPSLSQPRHEAVEWMLKVNAHYGFSALTATLAVTYLDTFLSSFHFQREKPWMIQLVAVTCISLAAKVEETQVPLLLDLQVQDAKYVFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWEFLRRCEHLLLSVLLDSRFVGCLPSVLATATMLHVIDQIEKSDGVEYKNQLLGVLKINKVSVHKVDECYNAILQLSNGNNYGNNNPSKRKYEQIPGSPSGVIDAAFSSDGSNDSWAVGSSLYSSPEPLFKKSRNQGQQMKLSPLNRVIVGIVGSSP. 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08071 389 MobiDBLite consensus disorder prediction 44 62 - -
Seca7g08071 389 Gene3D - 211 304 - -
Seca7g08071 389 CDD CYCLIN_AtCycD-like_rpt2 212 305 - -
Seca7g08071 389 MobiDBLite consensus disorder prediction 32 62 - -
Seca7g08071 389 FunFam CYCLIN D32 211 303 - -
Seca7g08071 389 Pfam Cyclin, N-terminal domain 84 209 IPR006671 -
Seca7g08071 389 Gene3D - 106 210 - -
Seca7g08071 389 SUPERFAMILY Cyclin-like 77 210 IPR036915 -
Seca7g08071 389 Pfam Cyclin, C-terminal domain 212 326 IPR004367 -
Seca7g08071 389 SMART Cyclin_C_2 212 343 IPR004367 -
Seca7g08071 389 SMART cyclin_7 115 203 IPR013763 -
Seca7g08071 389 PANTHER CYCLINS 80 306 IPR039361 -
Seca7g08071 389 CDD CYCLIN_AtCycD-like_rpt1 110 207 - -
Seca7g08071 389 FunFam D3-type cyclin 103 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08071 Seca-Chr7 185194978 185197808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08071 1 308 Core Cell Cycle Gene Families AT4G34160 56.818 3.11e-112 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08071 K14505 - gmx:547740 601.668