Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08059 ATGAGCCATAACTCCCAAAATCTCCATTTTTGGTGGAAAGTTTCATCCTTTCTTCTCCTAGTTCTTCAATCTGTTGCTCTTAACTCTGATGGGATTCTCTTGCTTAAATTCAAATACTCCATCCTCAGTGACCCATTATCAGTCCTAGACAGCTGGAACTATGATGATGCAACTCCATGTTCATGGCATGGAGTTACATGCACTGAAACTGGATCCCCTGGTACTGGTACCCCTGATTTGTTCAGAGTAACAAGCTTGGTTCTTCCAAACAACCAACTTCTAGGTTCCATTGCTGAAGAATTAGGCATGATCCAATACCTTCGCCATCTTGATCTCTCCAACAATTTCCTTAACGGATCTCTACCAAACTCTATCTTCAACTCTTCTCATCTTCAAGTTCTTTCTCTCTCAAACAATGTCATCTCAGGCCAGTTACCTGAGTTGATTGGTAAATTGACAAGCCTTCAATTTCTCAACCTTTCTGACAATGCCTTTGCTGGGTTGATCCCAGAAAATCTCACTGCTTTACAAAATCTAACAGTTGTTTCTCTCAAGAGTAACTATTTTTCTGGTGAAGTCCCAACTGGGTTCAACTCAGTGGAGATTTTGGATCTGTCTTCCAATTTGCTCAACGGTTCTCTACCAAATCACTTTGGTGGTGAAAGCTTGCGCTACTTGAACCTCTCTTACAACAAGATCTCAGGAACAATACCACCAGCATTTGCTAAACAGATTCCTGGAAACTCTACAATTGACCTCTCATTCAACAATCTCACAGGACCAATACCTGAGTCTCTGGCTCTGCTCAACCAAAAAACAGAGTTACTATCTGGGAATGCTGATCTATGTGGGAAGCCTTTGAAGATTCTTTGCTCTATTCCCTCTACTATTTCAACTCCTCCACCTAACATCACCAACACATCTTCACCAGCAATTGCAGCCATACCAAAAACAATTGACACAAACCCAACAACAAACACAACAGAAAACCCTTCTCAGAATGTCTCACAGAATGGCCTAAAACCTGCTACCATAGCAGCCATTGTGGTTGGAGACTTAGCTGGCATGGCCGTTTTAGCCTTAATCATTCTCTTTGTCTACCAACAAAGAAAGAGAAGAGATCCAAAACCAGCCACAGCCACAACCACAACCAACTCAGAAAAGAAACAGCAAATTGTTGCAAGACAAGACCCAGAGGTGAGAACAACCTCACTTCCATTTTCCTGCTTAAAAATCAAAGAAGAAGAGACTTCAGAGGCAACAAGCTCTGACAGTGACCATGACAACAACACCAACATGGACATCACAGCACAAAACGAGAATCTTCCAAAAGAAGGCACTCTTGTAACGGTGGACGGAGAGACAAAACTGGAACTGGACACTCTGCTGAAAGCCTCAGCATATATTCTTGGAACTAGCCGTGTGAGCATAGTGTACAAAGCAGTGCTTCATGATGGAAGAGTCTTTGCTGTTAGAAGAATTGGTGAGTGTGGCATTGAGAGAATGAAGGACTTCGAGAATCAAGTGCGTGCAATTGCAAAACTTCGCCACCCAAATTTGATCAAAGTTCGTGGATTCTGTTGGGGTGAAGATGAAAAGCTTCTAATCTCTGATTACATTCCCAATGGCAGCCTCGCCAGCGTTGGTTTCAGGAAAGGAGGTTCATCCCCTGTTAATTTATCCTTAGAGGTGCGGTTGAAGATAGCAAAAGGGGTTGCAAGAGGCTTGGCTTTCATTCATGAGAAGAAACACGTGCATGGCAACATTAAACCCAGCAATATTCTGTTAAACTCAGAAATGGAACCCATCATAAGTGATTTTGGGTTGGACCGGCTACTCTTGAATGATAGTATCAACCAGAGAGCAAACGGTTCGGCTAGGCAATTAATGGTGAACCAAAGAACCCAACAAGAACCTCCAATTGGTTCTGTTTCTAGCCCCTATGCAACAATGGGACCATCATCTAGTGGGGGCCAGGGTCAAGTACCATATCAAGCACCAGAGTCACTACAAAACATCAAACCAAGCCCCAAATGGGACGTCTATTCGTTTGGCATTGTGTTGTTGGAGCTTCTCAGTGGGAGGGTTTTCTCAGACCGGGAGTTAGACCAGTGGTCTGAAGTATCCGGTTCGGTTGAAGAGGAAAAAAACCGGATCTTGAGGTTAGCTGACGTGGCCATCAAGGCTGAGATAAAAAGCAGAGAAAATGTGATATTGGGATGCTTCAAGTTGGGGCTTAGCTGTGCTTCTCTTGTCCCACAAAAGAGACCATCCATGAAAGAGGCTCTACAAATCTTAGACAAGATCCCTGCTTCTGCCATTAATTAA 2328 0.4334 MSHNSQNLHFWWKVSSFLLLVLQSVALNSDGILLLKFKYSILSDPLSVLDSWNYDDATPCSWHGVTCTETGSPGTGTPDLFRVTSLVLPNNQLLGSIAEELGMIQYLRHLDLSNNFLNGSLPNSIFNSSHLQVLSLSNNVISGQLPELIGKLTSLQFLNLSDNAFAGLIPENLTALQNLTVVSLKSNYFSGEVPTGFNSVEILDLSSNLLNGSLPNHFGGESLRYLNLSYNKISGTIPPAFAKQIPGNSTIDLSFNNLTGPIPESLALLNQKTELLSGNADLCGKPLKILCSIPSTISTPPPNITNTSSPAIAAIPKTIDTNPTTNTTENPSQNVSQNGLKPATIAAIVVGDLAGMAVLALIILFVYQQRKRRDPKPATATTTTNSEKKQQIVARQDPEVRTTSLPFSCLKIKEEETSEATSSDSDHDNNTNMDITAQNENLPKEGTLVTVDGETKLELDTLLKASAYILGTSRVSIVYKAVLHDGRVFAVRRIGECGIERMKDFENQVRAIAKLRHPNLIKVRGFCWGEDEKLLISDYIPNGSLASVGFRKGGSSPVNLSLEVRLKIAKGVARGLAFIHEKKHVHGNIKPSNILLNSEMEPIISDFGLDRLLLNDSINQRANGSARQLMVNQRTQQEPPIGSVSSPYATMGPSSSGGQGQVPYQAPESLQNIKPSPKWDVYSFGIVLLELLSGRVFSDRELDQWSEVSGSVEEEKNRILRLADVAIKAEIKSRENVILGCFKLGLSCASLVPQKRPSMKEALQILDKIPASAIN. 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08059 775 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 27 199 - -
Seca7g08059 775 Pfam Leucine rich repeat 106 164 IPR001611 GO:0005515
Seca7g08059 775 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Seca7g08059 775 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 198 770 IPR046959 -
Seca7g08059 775 Gene3D Ribonuclease Inhibitor 198 293 IPR032675 -
Seca7g08059 775 Gene3D Phosphorylase Kinase; domain 1 432 539 - -
Seca7g08059 775 Gene3D Transferase(Phosphotransferase) domain 1 540 774 - -
Seca7g08059 775 MobiDBLite consensus disorder prediction 373 397 - -
Seca7g08059 775 Gene3D Ribonuclease Inhibitor 27 197 IPR032675 -
Seca7g08059 775 Pfam Protein kinase domain 470 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g08059 775 CDD STKc_IRAK 470 769 - -
Seca7g08059 775 FunFam Leucine-rich repeat receptor-like protein kinase 200 293 - -
Seca7g08059 775 SUPERFAMILY L domain-like 33 289 - -
Seca7g08059 775 SUPERFAMILY Protein kinase-like (PK-like) 469 768 IPR011009 -
Seca7g08059 775 MobiDBLite consensus disorder prediction 378 397 - -
Seca7g08059 775 CDD TM_EGFR-like 344 373 - -
Seca7g08059 775 Pfam Leucine Rich Repeat 222 242 IPR001611 GO:0005515
Seca7g08059 775 ProSiteProfiles Protein kinase domain profile. 464 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08059 Seca-Chr7 185101973 185105619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08059 17 774 Receptor kinase-like Gene Family AT4G37250 49.546 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Seca7g08059 Pkinase 1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08059 - - gmx:100820334 1114.37