Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08051 ATGAAAACCAGCTCCATTCACCTACCGCACCAGTGGGCCCCACCACTCCGCATGTTATGGTTTGGGTTTTGGCACCTTTATATAAACGCATCTTCTCAACCCCACTCACCAAGGCCACTCATAGACTTGTCCTGTTTGTCTCTCCATTCCTTTCTCAAATTCTCTTCACCTTTTGCTTCTGAAAAAGTATCCATGGGTAGCCTTGAAGCGGAAAGAACCACTGTTGGATGGGCAGCAAGAGACCCTTCAGGGATTCTCTCTCCATACACCTACAATCTGAGAAACACAGGCCCAGATGATGTTTACCTCAAAGTTCATTACTGTGGAATTTGCCATTCTGATCTCCACCAAATTAAAAATGATCTTGGCATGTCCAATTATCCCATGGTTCCAGGGCATGAAGTTGTTGGCGAAGTACTCGAGGTGGGCTCTAATGTTACCAAGTTCAGAGTGGGGGAGATTGTGGGAGCTGGACTCCTTGTTGGGTGCTGCAAAAACTGCAACGCATGCCAATCTGATATTGAGCAATACTGTAGCAAGAAGATCTGGTCTTACAATGATGTTTATACAGATGGAAAACCCACACAGGGTGGCTTTGCTGAAACCATGATCGTTGAGCAAAAGTTTGTTGTGAAAATACCAGAGGGTTTAGCGCCAGAGCAAGTTGCACCACTGTTGTGTGCGGGTGTGACTGTGTATAGTCCACTCTCTCACTTTGGGCTGAAACAGAGCGGGCTGAGAGGTGGAATTTTGGGGCTTGGAGGAGTGGGACACATGGGGGTGAAGATTGCAAAGGCATTTGGTCACCATGTGACTGTGATAAGCTCTTCTGATAGGAAGAAGCAAGAGGCTCTTGAGCACCTTGGAGCTGATGCATATCTGGTTAGCTCAGATACCACTAGCATGCAGGAAGCTGCTGAATCACTTGATTATATCATTGACACTGTGCCTGTTGGTCACCCTCTTGAGCCTTATCTTTCCTTGCTCAAACTTGATGGCAAGTTGATCTTGATGGGTGTGATAAACACTCCTCTTCAATTTGTTTCCCCCATGGTCATGCTAGGGAGGAAGTCAATCACTGGAAGCTTCATTGGGAGCATAAAGGAGACAGAGGAGATGCTAGAGTTCTGGAAAGAGAAGGGACTGAATTCCATGATTGAAATTGTAACTATGGATTACGTTAACAAAGCTTTGGAAAGATTGGAGAAGAATGATGTGAGATATAGGTTTGTTGTGGATGTCAAAGGCAGCAAACTTGATCAGTGA 1266 0.4558 MKTSSIHLPHQWAPPLRMLWFGFWHLYINASSQPHSPRPLIDLSCLSLHSFLKFSSPFASEKVSMGSLEAERTTVGWAARDPSGILSPYTYNLRNTGPDDVYLKVHYCGICHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTKFRVGEIVGAGLLVGCCKNCNACQSDIEQYCSKKIWSYNDVYTDGKPTQGGFAETMIVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAFGHHVTVISSSDRKKQEALEHLGADAYLVSSDTTSMQEAAESLDYIIDTVPVGHPLEPYLSLLKLDGKLILMGVINTPLQFVSPMVMLGRKSITGSFIGSIKETEEMLEFWKEKGLNSMIEIVTMDYVNKALERLEKNDVRYRFVVDVKGSKLDQ. 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08051 421 Pfam Alcohol dehydrogenase GroES-like domain 98 213 IPR013154 -
Seca7g08051 421 Gene3D - 228 384 - -
Seca7g08051 421 FunFam Putative cinnamyl alcohol dehydrogenase 6 385 414 - -
Seca7g08051 421 CDD CAD1 75 413 IPR047109 GO:0016616
Seca7g08051 421 SMART PKS_ER_names_mod 84 412 IPR020843 GO:0016491
Seca7g08051 421 PANTHER ALDEHYDE REDUCTASE 70 416 IPR047109 GO:0016616
Seca7g08051 421 FunFam Cinnamyl alcohol dehydrogenase 228 384 - -
Seca7g08051 421 Pfam Zinc-binding dehydrogenase 255 376 IPR013149 -
Seca7g08051 421 Gene3D - 77 414 - -
Seca7g08051 421 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 132 146 IPR002328 GO:0008270|GO:0016491
Seca7g08051 421 FunFam probable cinnamyl alcohol dehydrogenase 77 234 - -
Seca7g08051 421 SUPERFAMILY GroES-like 80 245 IPR011032 -
Seca7g08051 421 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 218 382 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08051 Seca-Chr7 185048701 185051291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08051 65 419 Monolignol Biosynthesis Gene Families AT3G19450 78.371 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08051 K00083 - gmx:100777558 637.491