Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08032 ATGATGATCAAGGAAGATGAAGCAACTCTTACAACAGCCAAGGAACAAGCAGGTGAAGTGATGAACAGAGACAAGAACAATGAGGGAAGCGAAGAAGACAATCCCGAAGAGTGGTTGAACCTCAGCTTAGGAGGCACTTCACTCTCAACAGCAGGAGACTCTGATTCACAATCAAGACCAGCTACTGCCAAAGTTTTTTCATGCAACTTTTGCATGAGGAAGTTCTTTAGTTCACAAGCATTAGGAGGTCATCAGAACGCTCACAAAAGGGAAAGAGGAGCAGCCAGAAGATATCAATCTCAGAGGACGATGGCACTAATGGGCTTGTCCATGAACAGTCCAATGCTTCGATCACTTGGTGTCCAGCCTCATTCACTCGTGCACAAGCCATGCAGAGGTGGAACTATGATGGCACCGAGCTTTCATGAAGCATATGTAGCAGGACTTGGAACGGCATGGACAACCTTAGCCTCTGAGGATCAAACGGATCTGGTGTGGCCAGGCAGCTTTCGTTTGGTTCCACAACAGCCCGAGCCACCACCTCAGGAGTCACTCAAGCTTGATTTAGACCTCAGACTCTGA 582 0.4794 MMIKEDEATLTTAKEQAGEVMNRDKNNEGSEEDNPEEWLNLSLGGTSLSTAGDSDSQSRPATAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRTMALMGLSMNSPMLRSLGVQPHSLVHKPCRGGTMMAPSFHEAYVAGLGTAWTTLASEDQTDLVWPGSFRLVPQQPEPPPQESLKLDLDLRL. 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08032 193 SUPERFAMILY beta-beta-alpha zinc fingers 63 92 IPR036236 -
Seca7g08032 193 PANTHER ZINC FINGER PROTEIN 4-LIKE 2 193 - -
Seca7g08032 193 MobiDBLite consensus disorder prediction 1 59 - -
Seca7g08032 193 MobiDBLite consensus disorder prediction 1 32 - -
Seca7g08032 193 MobiDBLite consensus disorder prediction 173 193 - -
Seca7g08032 193 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Seca7g08032 193 Gene3D Classic Zinc Finger 49 112 - -
Seca7g08032 193 MobiDBLite consensus disorder prediction 40 59 - -
Seca7g08032 193 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08032 Seca-Chr7 184848169 184848750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08032 2 180 C2H2 Transcription Factor Family AT1G24625 35.556 6.74e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08032 - - gmx:100811125 265.388