Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08017 ATGCTGCGTTTGTGCTTCACTCCTCTCGATTGTTGCTTCCGACGCCGTGGTGGTGCTGACGGACTTCTCTGGCACACCGACTTGAAACCTCACGCCTCCGGCGACTTCTCCATCGCCGTCGCTCAAGCCAATTACAGTCTCGAAGATCAGAGCCAAGTCTTCACCTCCCCTTCCGCCACTTACGTTGGCGTCTACGACGGCCACGGCGGACCTGAAGCTTCTAGATTCGTCAACAAACATCTCTTCCCTTATTTGCACAAATTTGCCACTGAGCAAGGGGGATTGTCTGTGGATGTGATAAAAAAGGCCTTTAGTGCCACGGAGGAGGAGTTCTTGCATTTGGTGAAGCTATCCTTGCCCATTAGTCCCCAGATTGCTTCTGTGGGATCTTGTTGTCTTCTTGGTGCAATTTCAAATAATGTGTTGTATGTTGCCAACCTTGGAGACTCCAGAGCTGTTCTTGGCAGGAGGAATATGGAGGGCAAGAATTGTCCTGTGGTGGCGGTGCGCTTGTCAACTGATCATAATGTAGCTGATGAGGAGGTGAGGAGAGAAGTTGAAGCCCTCCACCCTGATGATTCGCACATTGTGGTTTATAGCCGTGGAGTTTGGAGGATTAAGGGAATCATACAGGTGTCAAGATCTATTGGTGATGTGTATTTGAAGAGACCTGATTTCTACAGAGACCCTGTTTTTCAGCGATTTGGAAATCCTGTTCCTTTGAAGCGCCCTGTAATGACAGCTGAACCATCAGTCATTATTAGGGAGCTTGAATCAGAAGATTTATTCTTGATATTTGCATCAGATGGCCTTTGGGAACAATTAAGTGATGAAGCAGCAGTTGAGATTGTATTCAAATATCCAAGAGCTGTGAGTGTCTTCTGCTACTTGTGA 894 0.4743 MLRLCFTPLDCCFRRRGGADGLLWHTDLKPHASGDFSIAVAQANYSLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYLHKFATEQGGLSVDVIKKAFSATEEEFLHLVKLSLPISPQIASVGSCCLLGAISNNVLYVANLGDSRAVLGRRNMEGKNCPVVAVRLSTDHNVADEEVRREVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPVFQRFGNPVPLKRPVMTAEPSVIIRELESEDLFLIFASDGLWEQLSDEAAVEIVFKYPRAVSVFCYL. 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08017 297 PANTHER PROTEIN PHOSPHATASE 34 288 IPR015655 GO:0004722|GO:0006470
Seca7g08017 297 SMART PP2C_4 29 296 IPR001932 -
Seca7g08017 297 Gene3D - 26 293 IPR036457 -
Seca7g08017 297 CDD PP2Cc 48 293 IPR001932 -
Seca7g08017 297 ProSiteProfiles PPM-type phosphatase domain profile. 35 297 IPR001932 -
Seca7g08017 297 Pfam Protein phosphatase 2C 56 284 IPR001932 -
Seca7g08017 297 FunFam Probable protein phosphatase 2C 42 26 294 - -
Seca7g08017 297 SUPERFAMILY PP2C-like 44 286 IPR036457 -
Seca7g08017 297 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08017 Seca-Chr7 184731242 184734414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g08017 17 289 PP2C-type Phosphatase Gene Family AT3G51370 55.160 1.45e-111 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08017 - K01102 gmx:100813810 533.872