Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g08012 ATGGCTGATGCATTACATGAAGAGCAACGCAGGAGTGGTGCTCTTGCTGTTTCTCCTAAGAGGGACATTGCCTTGTTTGAAGGGGACAGAGATTTTGAGCCACACAATGGCATTGAATTTGAATCTCATGAAGCAGCATACTCCTTTTATCAGGAATATGCCAAATCTATGGGATTCACCACTTCAATTAAAAACAGCAGACGCTCAAAGAAAACAAAAGAATTTATTGATGCCAAATTTGCATGCTCTAGGTATGGAGTTACACCTGAGTCTGACAGTGGGAACAGTCGTAGACCAAGTGTAAAGAAGACGGATTGTAAAGCTTGCATGCATGTGAAGCGAAGGCCAGATGGAAAGTGGATCATTCATGAATTTATAAAGGAGCACAACCATGAACTTTTACCAGCTTTGGCATATCATTTTCGGATTCATAGAAATGTGAAATTAGCTGAAAAGAATAATATTGATATCTTGCATGCTGTTAGTGAACGCACTAGAAAGATGTATGTTGAAATGTCCAGACAATCTGGTGGCTGTCAAAACATTGGGTCTCTCTTGGGTGATACAAATTATCAGTTTGACAGGGGGCAGTATTTGGCTTTGGATGAGGGAGATGCCCAAGTTATGCTTGAGTATTTCAAGCACATTCAAAAAGAGAACCCCAACTTCTTTTATGTTATAGATTTAAATGAAGAACAGCGATTAAGAAATCTATTTTGGATTGATGCAAAAAGTATCAATGATTATCTCAGCTTTAACGATGTAGTTTCATTTGATACCACCTACATAAAAAGCAATGATAAGTTGCCATTTGCTCCTTTTGTTGGAGTGAACCATCACTCTCAACCCATATTGCTTGGATGTGCATTGGTTGCAGATTGGACTAAACCAACATTTGTTTGGGTATTGAAGACATGGCTTAGAGCAATGGGTGGGCAAGCTCCTAAAGCTATAATTACTGATCAAGACAAAGCCTTGAAGACTGCAATTGAAGAAGTCTTCCCAAATGTACGGCATTGCTTTTCTCTTTGGCACATACTGGAAAGGATACCTGAAAATCTGTCTTTTGTGATCAAGCAGTATAAGAACTTCTTGCCAAAGTTTAACAAATGCATTTCTAAGTCATGGACAGATGAACAGTTTGACATGAGATGGTGGAAAATGGTCACTAGATTTGAACTCCATAATGATGTATGGTTTCAGTCATTGTATGAAGACCGGAAAAAGTGGGTGCCAACTTACATGGGGGACACTTTTTTAGCTGGAATGTCTACACCTCAACGTTCTGAAAGTATGACCTCTTTCTTTGACAAATATATTCATAAGAAAATCACCCTTAAAGAGTTTGTTAAACAATATGGGATGATTCTTCAGAATAGGTATGATGAGGAAGCCATTGCAGATTTTGATACATTGCACAAACAGCCTGCGCTTAAATCTCCTTCACCTTGGGAAAAACAAATGTCAACAGTTTACACACATACAATATTTAAGAAATTCCAAGTCGAAGTGTTGGGTGTAGCTGGTTGTCAATCTAGGGTAGAGGTTGGAGATGGAACTATTGCAAAATTTATAGTTCAAGATTATGAGAGGGATGAGGAGTTTTTGGTAACTTGGAACGAGTTGAGCTCAGAGGTCTCTTGCTTCTGTCGATTGTTTGAATATAAAGGTTTCCTTTGCAGGCATGCCTTGAGTGTTCTCCAACGTTGTGGTTGTTCAAGTGTTCCTTCTCATTATATCATGAAGCGGTGGACCAAAGATGCCAAAATTAGGGAACCAATGGCAGATGGGACAAGAAGGATACAAACTAGGGTGCAACGATATAATGACTTGTGTAAACGAGCTATTGAGTTGAGTGAAGAAGGATCATTATCTGAAGAGAGTTACAATGTTGCTATTCGTGCACTTGTTGATGCCCTGAAGAACTGTGTACTTGTGAATAATTCTAACAACAATGGTGCAGATACTAGCAACAATGCTTATAGCCTTCGTGAAGCAGAAGAGAATCAGGGTAACCTTGCTCTGAAACCAAGCAAGAAGAGGAGCACAGCTAGGAAAAGAAAGGTGCAACTAGAACAGGATGTTATTCTTGTTGATGCTCAAGAGAGCCTGCAGCCAATGGATAATCTAAGCTCGGATGCAATGACACTTAATGGATATTATGGAACCCAGCAGAATGTGCAAGGACTGCATGTACAGTTGAACTTAATGGAGCCACCTCATGATGGTTACTATGTCAATCAACAGAGCATGCAAGGCCTGGGTCCATTGAATTCTATGGCTCCAAGCCATGATGGATTTTTCGGAACACAGCAAAGCATTCATGGGCTGGTAGAGGAGGGCAATTGGAATTTCGTCCAGCAACTACTTTTGGGTATAGCCTTCAGGATGAGCCTGATCCACAGTTCCATGGCAACAATTCAAGAAATACTTAGAGGCTGTCTCTTCTCCAATATGGTAGTTTCATCAGAGGCTGTCAAGTCAAGTTTCTGTGTGGTGATTGAGAAGTCCATTGAAGGAACTAGGACAACTTCAATTGTCTTTACAACAGTTCATATTCATAGTTCAAAGTTTCTGCAACTGTATTTACCTTTGAGAACTGGTGGCACAAACATTCTGAATGAACTGTCTCCGCAAATTGGAGTGAGAGAATATTCAGTTTCTCACATGAGGCAGAAGCTGTTGAGGTCCTGTAGTTGGAACAAATACAAAGACATATCACATTTCATGGTAACTATACAAGGAGTCCATTGGACTGATTTGTATAATCAGAATAAATTGACTAAGGAGGCTGGTCAATCTACATCAAGTGCTCTCAACAAGTTCACATCACAAATTAGAAAGCCTCCTCGTCGCAAAACTTCTCCTGTCAACTGGTTCCCACGCAAAAAAGTGGATTCCTACTTGAAGAGGAAAATTAAGATGCTTCAGGAAATAGATGGTATGAATTTGACACTTGATCAGACTCTAGGCAGTTCTAATCCACATTATTCAAGAGTATTGAGAGAGAAAATGGCAGCTAGAGAAGCGGCACACAAGGCAATGGAGGCTCGAAGAGCTGCATTGGTGGAAGCCTCTTGGTGTCGAATTTTACGCGCTGCCAGGATTCCCTGTGATGATGCAGAAGCTCAACTCTTAAAGGCAGAAAAAAGAGCAATTGAAGCTTTTGAGGCAGCCCAGGCTATGGGTGTTATCATGTTTGACTTGCCTGATTGCCCCAGGAAGCATTGTCAAATAGAAACATCCTCTGTTAATGGAGAAGGATCATCTACCCATACTGTTACTGCATCTTTTGAGACTGCCTTTGAGGTAGAAAAAGAAGTAGCTGCAGCAGTCAAAGCTGCATTTATTAGGCTAGCAAACTGTCCTTCATTTAGTAAAGATGAAGTCAGAGAACTGCTGAGAAAAATTAGTGAAAATCCAGATACAGATGAAAGTAATCAGGACTTGTCTGAGTTCTCATCAGAGTATGAATCAGAGTCTGGGTCAGAGCTTGATCCAGTCTCTCAAAAGAATGACTTCAACTCCCAAGACTTGGATTCCAAAATGCCATTTCCGGGGTTAAGTCAGAGGAAAAGCAGGAGGAGACAGTCTCTGGACAACAGAATAAAACTAGTGGATATGATGATTGATAGGTTAAAATGTTTGCAAGAAGACGAACTTTCTTCTCTTGCCACTATAGTTGCAACTTACGGTTTAAATGCAGCCTTGGGTGAAATGCAGAATATTAAGCAGCACAATCCAGGCTCTGCTTCTGAGTATGCCTCCTCTTCAGCAATTAATTTTCAAGCAAGAAGAATGTCATCATTGGGATTGAGAAAAAAGCAAGATGAGCCAGAATTGCCAAGCCTAGATAAATTTCTAGTTAAGCACATGACAAAACTTGAAAGAGAGGTCTGGGAAGCCAAGAAGAACCGAAGGAATGAGACAGAATCAGGTAAGGATAACTCCTGTACATCTGTTGATGGAACTCCATCAGAGACCATACCTGATTTGGGAAGTATTCTAGTGAATTATACAAAATTAGAGAAAGACATCAAGGAAGCAAAAATTAAGTCAGGAAAGGAAATGCCAAGAGTTCCAAGTGGCATGCCAAGCCGTCAAAAGGATCACACAGAAGTACCAAGCTTGGATAAGGTCTTAGTGAAACATGTCTCAAGACTAGAAAAGGAAGTCCAAGAAGCAAAGAACAGAACAATCAATGAGGGCAGAAGTTTGAAGAAAAAAGTTGATCTGGATACCTCAGGCGGACTTAATTCAACTTCCTATTCTGATGAAACATTGGGCAGGAAAGAAAACATTGATCTGAATACAGAGATTAATTTGAGTTCTAAGATAGAGGAAAACAAAGATGGGTTGGACAAGATTCTGATAAAGCCCGTGCACAGATTGGAAAGGGAGAAGATGCAGGCCTTGTCACTCAGAAGCCAAGTTGAAAATTATAGACCAAAAAAGGATAATGGAGCAACCAATGTTACAGATTGTGAGAGCTTGGATAAAATTCTAGTTAAGCATGTGTCTAGACTGGAGAAGGAGAAAATGAGGAGCAATTCAGGGGAAGAATGGGGTGAGGTTAAGAGAAGTCACAGAAACATCCCTTTGGAGACAAATAAAGAAGGTGGCCTGGACCAGGTTTTGGTTAAACACAAATCCAGACTTGAGCGAGAAAAGATGGCTGCTACTGCTCAGCAGCTAGAAAACCCGGTTAGTCATTCTAAGGCTCGCCGTGAAGCAAGGGAGAGAGAGTTGCAAGAAGCTTGGGGAGGACTGAGCCTAGGAACCTCTGTTAAGCCTCGTCTCTCTAAGCTTGAACGAGACAAGGCTGCCTGGATTAAAGCTGAAGAGGAGGAGAGGAAGCAAGCAATGAAAGCAATATGA 4878 0.4075 MADALHEEQRRSGALAVSPKRDIALFEGDRDFEPHNGIEFESHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPESDSGNSRRPSVKKTDCKACMHVKRRPDGKWIIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSRQSGGCQNIGSLLGDTNYQFDRGQYLALDEGDAQVMLEYFKHIQKENPNFFYVIDLNEEQRLRNLFWIDAKSINDYLSFNDVVSFDTTYIKSNDKLPFAPFVGVNHHSQPILLGCALVADWTKPTFVWVLKTWLRAMGGQAPKAIITDQDKALKTAIEEVFPNVRHCFSLWHILERIPENLSFVIKQYKNFLPKFNKCISKSWTDEQFDMRWWKMVTRFELHNDVWFQSLYEDRKKWVPTYMGDTFLAGMSTPQRSESMTSFFDKYIHKKITLKEFVKQYGMILQNRYDEEAIADFDTLHKQPALKSPSPWEKQMSTVYTHTIFKKFQVEVLGVAGCQSRVEVGDGTIAKFIVQDYERDEEFLVTWNELSSEVSCFCRLFEYKGFLCRHALSVLQRCGCSSVPSHYIMKRWTKDAKIREPMADGTRRIQTRVQRYNDLCKRAIELSEEGSLSEESYNVAIRALVDALKNCVLVNNSNNNGADTSNNAYSLREAEENQGNLALKPSKKRSTARKRKVQLEQDVILVDAQESLQPMDNLSSDAMTLNGYYGTQQNVQGLHVQLNLMEPPHDGYYVNQQSMQGLGPLNSMAPSHDGFFGTQQSIHGLVEEGNWNFVQQLLLGIAFRMSLIHSSMATIQEILRGCLFSNMVVSSEAVKSSFCVVIEKSIEGTRTTSIVFTTVHIHSSKFLQLYLPLRTGGTNILNELSPQIGVREYSVSHMRQKLLRSCSWNKYKDISHFMVTIQGVHWTDLYNQNKLTKEAGQSTSSALNKFTSQIRKPPRRKTSPVNWFPRKKVDSYLKRKIKMLQEIDGMNLTLDQTLGSSNPHYSRVLREKMAAREAAHKAMEARRAALVEASWCRILRAARIPCDDAEAQLLKAEKRAIEAFEAAQAMGVIMFDLPDCPRKHCQIETSSVNGEGSSTHTVTASFETAFEVEKEVAAAVKAAFIRLANCPSFSKDEVRELLRKISENPDTDESNQDLSEFSSEYESESGSELDPVSQKNDFNSQDLDSKMPFPGLSQRKSRRRQSLDNRIKLVDMMIDRLKCLQEDELSSLATIVATYGLNAALGEMQNIKQHNPGSASEYASSSAINFQARRMSSLGLRKKQDEPELPSLDKFLVKHMTKLEREVWEAKKNRRNETESGKDNSCTSVDGTPSETIPDLGSILVNYTKLEKDIKEAKIKSGKEMPRVPSGMPSRQKDHTEVPSLDKVLVKHVSRLEKEVQEAKNRTINEGRSLKKKVDLDTSGGLNSTSYSDETLGRKENIDLNTEINLSSKIEENKDGLDKILIKPVHRLEREKMQALSLRSQVENYRPKKDNGATNVTDCESLDKILVKHVSRLEKEKMRSNSGEEWGEVKRSHRNIPLETNKEGGLDQVLVKHKSRLEREKMAATAQQLENPVSHSKARREARERELQEAWGGLSLGTSVKPRLSKLERDKAAWIKAEEEERKQAMKAI. 1626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g08012 1625 ProSiteProfiles Zinc finger SWIM-type profile. 535 571 IPR007527 GO:0008270
Seca7g08012 1625 Coils Coil 1038 1058 - -
Seca7g08012 1625 MobiDBLite consensus disorder prediction 1557 1588 - -
Seca7g08012 1625 Coils Coil 1292 1312 - -
Seca7g08012 1625 MobiDBLite consensus disorder prediction 933 956 - -
Seca7g08012 1625 Pfam MULE transposase domain 255 348 IPR018289 -
Seca7g08012 1625 Pfam FAR1 DNA-binding domain 48 135 IPR004330 -
Seca7g08012 1625 MobiDBLite consensus disorder prediction 1152 1183 - -
Seca7g08012 1625 Coils Coil 1600 1620 - -
Seca7g08012 1625 MobiDBLite consensus disorder prediction 1137 1196 - -
Seca7g08012 1625 PANTHER MYOSIN-2 HEAVY CHAIN-LIKE PROTEIN 922 1623 - -
Seca7g08012 1625 MobiDBLite consensus disorder prediction 1353 1373 - -
Seca7g08012 1625 MobiDBLite consensus disorder prediction 1570 1584 - -
Seca7g08012 1625 MobiDBLite consensus disorder prediction 1300 1330 - -
Seca7g08012 1625 MobiDBLite consensus disorder prediction 1314 1330 - -
Seca7g08012 1625 SMART 26again6 546 573 IPR006564 GO:0008270
Seca7g08012 1625 Pfam SWIM zinc finger 537 570 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g08012 Seca-Chr7 184692517 184702474 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g08012 MULE 2.1e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g08012 - - gmx:100805377 1429.46