Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07977 ATGAGGCGACACATTGGTAGGAAGGGAAGTGGCGCCAGAACATGGCTGGTTTTGGGCGGCGCCGGGAAGAAACAGGTGGTGGACGCCGCAAGACACCTCATAATGCGGCGGACAGGGCTTACCGCTCGGGACCTTCGGATTCTTGACCCTTTGTTGTCTTACCCTTCCACCATTGCAGGGCGTGACAGAGCCATCGTCATCAGCTTGGAACACATCAAGGCTATCATCACTGCCCAAGAGGTTCTCTTGCTCAATTCCAGGGACCCCTTTGTTATCCCTTTCGTTGACGACCTTCATGCACGGATTCTTCGTCACCACAGTGTAACTCAAACTCAGAGTCAAGATCGGAAGAAGAAGGATAAAGATGAAACAAAGCAAGATAGCAGCATCAAGATTTTCCCTTTTGAGTTTGTAGCACTCGAGGCATGCCTTGAGGAAGCTTGTAGTGTCTTAGAAAATGATGCAAAGATATTGGAGCAGGAGGCTCATAATGCCTTAGATAATCTGACTTCAAAGATTAGTACTCTCAATTTGGAATGCGTTCGCCATGTTAAGAGCCGCTTAGCTGCCTTAACCGCTCGTGCTCAAAGGGTAAGGGATGAATTAGAAAACTTGCTGGATGATGATGAAGATATGGCTGAGCTCTATCTCACAGAAAAGTTAGTTCAACATCACCTTGAAAGTTGTTCTGCCTCATCCATGACCATCAATGACTGGGATGACATGGAGAATCGTGTTCTTCAACCAGATATAAATGACAGTAGGATTCCTCCTGAAATATCATTGGAACGTGGAGGAGATTCTACAAGGGATCATGAAGAAGATCATCAAAATGCTGCTGAATACTCCAGCAACCAAGACCATGAGACCCAAGCAGGACCTAGCCACAGTGCTTTAACCAAGAACAATAATGTGGAGGAGGTTGAGATGCTTTTGGGAGCCTACTCTGTACAAATCGGTGGCACATTGAACAAACTATCAACGCTGAAGGAGTATGTGGATGATACTGAGGATTACATAAACATTACCCTGGATGACAAACAGAACCAAATCCTGCAAACGGGAGTGAAGGTGGGCACAGCAAGTGTGCTTGTGAATGCGTTTGTTGTGGTGGCGAGTATTTTTGGAATGAATATTCACATTGAGCTATTTGATAGTGGGATGGCACAGTTCCTGGGGGTTATTTTCGGATGCACCACTTCTTGCATATTCTTGTACATCGTTGCCATGATCTGGTACAAGCACAACCGCTTGCTCGAATAG 1263 0.46 MRRHIGRKGSGARTWLVLGGAGKKQVVDAARHLIMRRTGLTARDLRILDPLLSYPSTIAGRDRAIVISLEHIKAIITAQEVLLLNSRDPFVIPFVDDLHARILRHHSVTQTQSQDRKKKDKDETKQDSSIKIFPFEFVALEACLEEACSVLENDAKILEQEAHNALDNLTSKISTLNLECVRHVKSRLAALTARAQRVRDELENLLDDDEDMAELYLTEKLVQHHLESCSASSMTINDWDDMENRVLQPDINDSRIPPEISLERGGDSTRDHEEDHQNAAEYSSNQDHETQAGPSHSALTKNNNVEEVEMLLGAYSVQIGGTLNKLSTLKEYVDDTEDYINITLDDKQNQILQTGVKVGTASVLVNAFVVVASIFGMNIHIELFDSGMAQFLGVIFGCTTSCIFLYIVAMIWYKHNRLLE. 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07977 420 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 419 IPR039204 -
Seca7g07977 420 Coils Coil 181 219 - -
Seca7g07977 420 CDD Mrs2_Mfm1p-like 15 418 IPR039204 -
Seca7g07977 420 FunFam Magnesium transporter MRS2-1 3 86 - -
Seca7g07977 420 MobiDBLite consensus disorder prediction 283 300 - -
Seca7g07977 420 Gene3D Magnesium transport protein CorA, transmembrane region 93 351 - -
Seca7g07977 420 MobiDBLite consensus disorder prediction 264 282 - -
Seca7g07977 420 Gene3D - 2 86 - -
Seca7g07977 420 Coils Coil 141 179 - -
Seca7g07977 420 MobiDBLite consensus disorder prediction 249 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07977 Seca-Chr7 184332060 184333956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07977 14 420 MRS2 Gene Family AT3G19640 54.054 5.74e-145 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07977 - - ccaj:109817554 494.197