Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07955 ATGGCTGTTCTTTCCTTTCTCTGTTGTCTGCTTTTGCTAATCATTTTCACATCTCAAGCTAATGCCGCCAACAATACACAAAACTTCCACTACTTCTGTGCTGAGGATGACATTAACTACAGAGGTAACTACACAACCAATAGCACATACCACAGGAACCTCAACACCCTTTTATCCACCCTCACTTCCAACACACAAATTGACTACGGTTTCTACAATTTGTCCTATGGCCAAAACAGTACTACTGACAAAGTAAACGCCATTGGGCTGTGCAGAGGAGATATTAAGGCAGATGATTGCCTTAGATGCCTCAACGGTTCAAGAGCCAATCTCACACAACTCTGTCCGAACCGTAAAGAGGCAATTGGGTGGTATGAGGATGAGAAATGCATGTTGCGTTACTCAAACCGCTCAATATTCGGCATCATGGAAACTGGACCTGCCTATTACGCGAACAACCTGGAAAATGCAACCGACTTGGATGAGTTCAATCAAGTGGTTAGGAGCTTGCTGGATAACTTAACAAGCATAGCTGCATCAGGTGACTCACGTCATAAATATGCTGCATCAAGTGCACCTGCTTCTAATGATCAAACCATATATGGTCTAGTTCAGTGCACGCCTGATTTGTCCAAGTCACAATGCAGTGACTGCTTGGTTCAGTCTATTGCACGCATACCAATAGATTGTTGTAAAAACAAGATAGGTGGCAGGGTTGTTAGGCCCAGTTGTAATATCAGATTTGAAACCTCATTCCTCTTCTATGATCCTACAGCAACACCGCCACCTCCTCCATCCATCACCACCACTAGTAACACTTCCTCGCACGGTAATAGCAGGACCGTGATCGCCATAGTAGTAGCAGTTATTGTTGCTCTTATGTTGCTCATTTTTATCTGCGTCTATTTAAGAGTGAAGAGGAAGCCAAAGAAAACGTTTCAAAAAGCTGAAGAAGATGATGATGAAGAAATTTCAATTTCTAAGTCTTTCCAATTCGACTTTAGCACCATACGAGAAGCTACAGACGACTTCTCTGATTCTAATAAACTTGGACAAGGCGGATTTGGTACTGTTTACAAGGGCACTCTCTCCAATGGACAAGAGATTGCTGTCAAAAGGTTGTCAAGGGACTCTGGCCAAGGGGATCTAGAATTTAAGAATGAAGTGCTTTTAGTTGCTAAGCTTCAACACCGCAATTTAGTTAGGCTACTTGGTTTCTGTCTAGAAAGAAGAGAAAGGCTACTTATCTATGCATTTGTTCCTAATAAAAGTCTTGATTACTTCATATTTGATCAAATCCAGAGAGCACAATTAGATTGGGAAAAACGCTACAAAATCATTGCAGGTATTGCTCGAGGCATTCTTTACCTTCACGAGGATTCTCGACTGCGCATTATCCATCGTGATCTAAAAGCAAGCAACATTCTCTTAGATGAAGAAATGAATCCTAAGATATCAGATTTTGGCATGGCAAGACTTTTTGTTGTGGACCAAACACAGGGAAATACAAATAGAATTGCTGGAACCTTTGGATATATGGCACCTGAATATGCAATGCATGGACAGTTTTCAGTAAAGTCAGATGTCTTTAGTTTTGGTGTGCTGGTTCTTGAGATTGTAAGTGGCCAAAAAAACAGTGGAATTCGTCATGGGGAGAATATAGAGGATCTATTGAGCATTGTATGGAAAAATTGGAGGGACGGGTCAGCAACAAATATTATAGATTCCACACTAAACAATTATTCACTAAATGAAATAATGAGATGCATCCACATTGGGTTACTATGTGTTCAAGAAAATATAGCTTGCAGACCAACCATGGCTTCCATTGTACTGATGCTTAATAGTTGTTCTGTCACTCTGCCGGTACCTTCAGAACCTGCGTTTTATGTGGATAGTAGAACTGAAAACCTTCCAAACATGCCGTGTTCCCATAGGACAATTTATGATATGGCTACTGTTTGTTCTAGGCTTCTGCTTTCCTTACTTTGTTGGCTTTCTGTAATAATAATATCTCAAGCCAGCACCGAGCCAATGTATGCATACTATACCTGTGATTACAACAACTTAGGCAACTACACAGCCAATAGCACCTATCACAACAACCTCAACTCCCTTTTATCCAATTTCTCTTCTCACACGGAAATTAATTATGGATTTTACAATTTCTCATACGGCCAAAACACAAACAGAGTGAACGCCATTGGGTTGTGTAGAGGAGATCTTATCCCAAGTGAGTGTCTCAACTGCCTCACCAATTATTCAAGAGTCAAAATGGAACAGCTTTGTCCAAATCAGAAAGAGGCAATTGTGTGGTATGACAAATGCATGTTGCGCTATTCGAACCGCTCAATATTTAGCCTCAAGGAAACTTCTCCTGCAATTTACATGTGGAACAGAAACAATGTAACGGAGGTGGATCAGTTCAATCAAGTGCTCAACAACTTGATGAGGAATCTAAAAGGCATAGCTGCATCGGGTGATTCTCGTCGTAAGTATGCTACAGATAATGCAACTACCGCAAATTTTCAAACCATATATGGTCTTGTGCAGTGCACGCCTGATTTGTCAGGGCAAGATTGTAATGACTGTTTGGATGAAGCTATCTCAAATATCCCAAGTTGTTGTGATGGAAAGATAGGTGGTAGAGTTCTTATGCCTAGTTGTTATATTAGATATGAATCTGCTCGTTTCTACGAACCTGCGATAGTATTAGACCAAGATAATCCTGTACCACCTCCACCATCTCCTCTGTCCACCAATAACACTTCCTCCAAAGTTGTGCCTACTGTCGCTGTTGTTGCTGTTGCTGTTGCTCTGCTCATTTTTGTTGGCATGTATTCAAGGAGCAGGAAGGCCAGGAAAGTCGTAGAAGAAGATGGTGATGACAATGATGAAATTGAAGTTGTTGAGTCATTGCAATTCAACTTTGACAAAATACGAGATGCTACAAGTAATTTCTCTGATTCTAATAAACTTGGACAAGGTGGATTTGGAGCTGTTTACTGGGGTAAGCTTTCTAATGGACAAGTGATTGCTGTCAAAAGATTGTCAAGAAATTCTGGACAAGGAGATATTGAATTTAAGAATGAAGTGCTTTTAGTGGCCAAGCTTCAACACCGAAATTTGGTGAAGCTACTTGGTTTCTGTCTAGAAGGAAGAGAAAGGCTACTTGTCTATGAATTTGTTCCTAATAAAAGTCTTGATTACTTCATATTTGATCCAACAAAGAAAGAACAATTGGATTGGCAAAGACGCTACAAAATCATTGGAGGTATTGCTCGAGGTCTTCTATACCTTCATGAGGATTCTAGACTTCGCATTATACATCGTGATCTCAAAGCAAGCAACATTCTCTTAGATGATGAGATGAATCCTAAGATATCAGATTTTGGCATGGCAAGATTATTTGTTATGGATGAAACTCAAGGGAATACAAGTAGAATTGTTGGAACCTATGGATATATGGCACCTGAGTATGCAATGCATGGACAATTTTCAGTAAAATCAGATGTCTTTAGTTTTGGTGTACTAGTTCTTGAGATTGTAAGTGGACAAAAAAATAGTGGCTTTCATCATGGGGAGAATGTGGAGGATCTACTAAGCTTTGCATGGAGAAATTGGAGAGATGGGACAGCTACAAACATTATAGATCCATCATTAAACAACAGTTCACGAAATGAGATTATGAGATGCATCCATATTGGTTTACTCTGTGTTCAAGAAAATTTAGCGGACAGACCAACCATGGCTACCGTTGTACTCATGCTGAATAGTTTTTCTCTCACTCTCCCAGTACCTTTAGAACCTGCATTTTATATGGACAGTAAAACTAGAAGTCTTACAAACATGCAATCATGGGAAGATAATTCTGAGGTAATAAAGTCAAGTGAGTCCATGAGAATTATATCACCTCGAGAATAG 3924 0.3996 MAVLSFLCCLLLLIIFTSQANAANNTQNFHYFCAEDDINYRGNYTTNSTYHRNLNTLLSTLTSNTQIDYGFYNLSYGQNSTTDKVNAIGLCRGDIKADDCLRCLNGSRANLTQLCPNRKEAIGWYEDEKCMLRYSNRSIFGIMETGPAYYANNLENATDLDEFNQVVRSLLDNLTSIAASGDSRHKYAASSAPASNDQTIYGLVQCTPDLSKSQCSDCLVQSIARIPIDCCKNKIGGRVVRPSCNIRFETSFLFYDPTATPPPPPSITTTSNTSSHGNSRTVIAIVVAVIVALMLLIFICVYLRVKRKPKKTFQKAEEDDDEEISISKSFQFDFSTIREATDDFSDSNKLGQGGFGTVYKGTLSNGQEIAVKRLSRDSGQGDLEFKNEVLLVAKLQHRNLVRLLGFCLERRERLLIYAFVPNKSLDYFIFDQIQRAQLDWEKRYKIIAGIARGILYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGMARLFVVDQTQGNTNRIAGTFGYMAPEYAMHGQFSVKSDVFSFGVLVLEIVSGQKNSGIRHGENIEDLLSIVWKNWRDGSATNIIDSTLNNYSLNEIMRCIHIGLLCVQENIACRPTMASIVLMLNSCSVTLPVPSEPAFYVDSRTENLPNMPCSHRTIYDMATVCSRLLLSLLCWLSVIIISQASTEPMYAYYTCDYNNLGNYTANSTYHNNLNSLLSNFSSHTEINYGFYNFSYGQNTNRVNAIGLCRGDLIPSECLNCLTNYSRVKMEQLCPNQKEAIVWYDKCMLRYSNRSIFSLKETSPAIYMWNRNNVTEVDQFNQVLNNLMRNLKGIAASGDSRRKYATDNATTANFQTIYGLVQCTPDLSGQDCNDCLDEAISNIPSCCDGKIGGRVLMPSCYIRYESARFYEPAIVLDQDNPVPPPPSPLSTNNTSSKVVPTVAVVAVAVALLIFVGMYSRSRKARKVVEEDGDDNDEIEVVESLQFNFDKIRDATSNFSDSNKLGQGGFGAVYWGKLSNGQVIAVKRLSRNSGQGDIEFKNEVLLVAKLQHRNLVKLLGFCLEGRERLLVYEFVPNKSLDYFIFDPTKKEQLDWQRRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDDEMNPKISDFGMARLFVMDETQGNTSRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLVLEIVSGQKNSGFHHGENVEDLLSFAWRNWRDGTATNIIDPSLNNSSRNEIMRCIHIGLLCVQENLADRPTMATVVLMLNSFSLTLPVPLEPAFYMDSKTRSLTNMQSWEDNSEVIKSSESMRIISPRE. 1308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07955 1307 FunFam Cysteine-rich receptor-like protein kinase 10 793 898 - -
Seca7g07955 1307 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 699 1282 - -
Seca7g07955 1307 SUPERFAMILY Protein kinase-like (PK-like) 332 637 IPR011009 -
Seca7g07955 1307 CDD STKc_IRAK 993 1258 - -
Seca7g07955 1307 Gene3D - 679 784 IPR038408 -
Seca7g07955 1307 Gene3D - 34 138 IPR038408 -
Seca7g07955 1307 Gene3D - 147 252 IPR038408 -
Seca7g07955 1307 Gene3D - 791 898 IPR038408 -
Seca7g07955 1307 FunFam cysteine-rich receptor-like protein kinase 10 420 621 - -
Seca7g07955 1307 ProSitePatterns Protein kinases ATP-binding region signature. 993 1015 IPR017441 GO:0005524
Seca7g07955 1307 FunFam Cysteine-rich receptor-like protein kinase 10 147 252 - -
Seca7g07955 1307 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1108 1120 IPR008271 GO:0004672|GO:0006468
Seca7g07955 1307 ProSiteProfiles Protein kinase domain profile. 344 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07955 1307 FunFam Cysteine-rich receptor-like protein kinase 10 306 419 - -
Seca7g07955 1307 Gene3D Transferase(Phosphotransferase) domain 1 420 621 - -
Seca7g07955 1307 Gene3D Transferase(Phosphotransferase) domain 1 1063 1263 - -
Seca7g07955 1307 ProSiteProfiles Protein kinase domain profile. 987 1261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07955 1307 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 678 785 - -
Seca7g07955 1307 FunFam cysteine-rich receptor-like protein kinase 10 1063 1264 - -
Seca7g07955 1307 Gene3D Phosphorylase Kinase; domain 1 948 1062 - -
Seca7g07955 1307 Gene3D Phosphorylase Kinase; domain 1 305 419 - -
Seca7g07955 1307 Pfam Protein tyrosine and serine/threonine kinase 347 612 IPR001245 GO:0004672|GO:0006468
Seca7g07955 1307 Pfam Protein tyrosine and serine/threonine kinase 990 1255 IPR001245 GO:0004672|GO:0006468
Seca7g07955 1307 ProSiteProfiles Gnk2-homologous domain profile. 681 785 IPR002902 -
Seca7g07955 1307 ProSiteProfiles Gnk2-homologous domain profile. 145 253 IPR002902 -
Seca7g07955 1307 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Seca7g07955 1307 ProSiteProfiles Gnk2-homologous domain profile. 791 898 IPR002902 -
Seca7g07955 1307 ProSiteProfiles Gnk2-homologous domain profile. 32 139 IPR002902 -
Seca7g07955 1307 Pfam Salt stress response/antifungal 801 895 IPR002902 -
Seca7g07955 1307 Pfam Salt stress response/antifungal 42 136 IPR002902 -
Seca7g07955 1307 Pfam Salt stress response/antifungal 685 782 IPR002902 -
Seca7g07955 1307 Pfam Salt stress response/antifungal 155 250 IPR002902 -
Seca7g07955 1307 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Seca7g07955 1307 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 30 139 - -
Seca7g07955 1307 SMART serkin_6 344 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07955 1307 SMART serkin_6 987 1261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07955 1307 CDD STKc_IRAK 350 615 - -
Seca7g07955 1307 SUPERFAMILY Protein kinase-like (PK-like) 975 1287 IPR011009 -
Seca7g07955 1307 FunFam Cysteine-rich receptor-like protein kinase 10 949 1062 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07955 Seca-Chr7 184124969 184135997 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07955 3 633 Receptor kinase-like Gene Family AT4G21410 51.598 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca7g07955 PK_Tyr_Ser-Thr 3.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07955 - - lang:109335396 1511.12