Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07947 ATGCTTCCCATAACTCTTCTGCTTCTCTGCTTCCCAATAGAATTCTTGATTAGCAGAACCCAAGCAGAGCCTACTTACAGTTATCACTTTTGTCTAAACACAACCACTTTTGCCCCAAACAGCACCTACCAAACCAACCTCAAAACTTTACTCTCAACTATTTCTTCAAACTCCAATCAAAGTGATGGGTTCTACAACACCACCACCGGTCAAAACAACCCGAACAACACGCTCTATGGTCTCTTCCTCTGTCGAGGAGACGTCACCACTCAGACATGCCAGGACTGTGTCTCAACAGCAACCAAACAAGTCCTTCAAAGATGTCCCAACGAGAAAGAGGCTTTCATTTGGTACGATGAATGCTTGCTACAGTATTCCGATGAGTCTTTCTTTTCCACGGTGCAAGAAAGACCACTAATTCCCTTGTCCAACATTGCCAATGCCTCGGACCAGAGTAGCTTCATGCAGTTGGTGGGTGTTACCTTGCATGCAGTGGCTGAAGAAGCAGCAAATGGTGAGAATGGCAAGAAGTTTGCCACCAAAGAAGCCGATTTCACTGGTTCTACAATTTTGTACACACTTGGACAGTGCACTCCGGATTTGTCAACGCCAGATTGCAATAAGTGTCTGCAGATAGCGATTGCAAACCTACCCAATTGCTGCAATGGGAAACAGGGTGGAAAAGTGCTCACTCCTAGTTGTTATGTTAGGTATGAAGTGTACCCTTTCTACAGAAGCGTGGCTTTGGCGCCAGTGCCTAGGCCAGACTTAACTCAGAACCACAAGCCATTTTGTAATAAAAGTAATACATTTTGGAAATGCAGAACAAGCAATATCTCTATAATTGTTGCGATTGTTGTCCCAATTGTTGTTGCTGTCGCACTTTTCATTCTCGGCTGCTGCTACCTGCGTAAGAGGGCTAGCAACAAGTATAACTATAAGACTTACATCCGGAATTCAATTCGGGAGGATCTTTCAGATGTAGAGTCCTTGCAATTTGACTTGGCTACAGTCCAAGCTGCCACGAACAGCTTCTCAGATGAGAACAAGATTGGCCAAGGTGGATTTGGTGTGGTTTATAAGGGTGTCCTCCCTAACGGACAGGAGATAGCTGTGAAGAGGTTGTCAGTAACCTCCTTGCAAGGTGCAATAGAGTTCAGGAATGAAGCTACCCTTGTGGCCAAGCTTCAACATAGAAATTTAGTGAGGGTATTGGGATTTTGCTTGGAGGGGAGGGAGAAGATGCTTATCTATGAATACATGCAAAACAAAAGCCTTGATCACTTTCTATTTGATCCGGTAAAGCAGAGAGAGTTAGATTGGTCAAGACGCTATAAGATAATAGTTGGCATTGCTCGAGGAATTCAATATCTCCATGAAGATTCCCAGCTTAGAATTATTCATCGTGACCTCAAAGCTAGCAATGTTTTATTAGATGAAAATATGAATTCAAAGATTTCAGATTTTGGCATGGCGAAAATTTTCCAGGCAGATCAGACTCAAGTTAATACAGGAAGGATAGTTGGGACTTATGGTTACATGTCTCCAGAATATGCAATGCGTGGTCAGTTCTCTGTAAAATCAGATGTGTTCAGCTTTGGTGTCTTAGTTTTGGAGATTGTGAGTGGCAAGAAGAACACTGATTTTTATCAATCAAATCAGGCTAATGACCTCTTAAGCTATGAAAATCCAGCTGACAGACCTTCAATGGGGACTGTAGTACTTGTGTTGAACAGTTATTCAGTAACTTTAGCATTACCTCGACAGCCAGCATCTTTTCTGCGTGGAAGAGCAACACCAGAGGACTGCGCTATGATTCCTTCACTTGTGCTGCTTTCATTTCTTGTCATACTCAAATCTGAAGCCAACGACGACCAGCTAAGTTTCCTGTACCACGAATGTAACGAATTCCTCGGAAATTTTACCCGGGGCAGTACCTACAACAGCAACCGGGATGCCCTTCTTCAAGAGATCATTTCCGACAGAAAAATTGATTACGGCTTCTACAATTTCTCCTACGGCAAAGACTCTGACAAAGTCAACGCAATAGGGATCTGTAGAGGAGATGTTAAGCCAGATGAGTGCCGTGGTTGCCTGGGCAAATCCGCGGCTCTTCTCATAAACCAGTGCGAAGTACAGAAGGAGGCAATTGGATACTATGACAAATGCACGTTACGCTATTCTAACGATTCAATATTTGGTGTCTGGGAATCTGAAACATCCAAAGTACACTGCAATCAAGATAACAAGAAAATGGGTTATGGGTTCAACCAAATGCTCCATGGTTTGCTGGATAGACTTAAAAGCACGGCGGCAGACGGTGATTCCCGTCGGAAGTTTGCTGAAGATAGTGCTCCAGTACTTCAATCAAGCAATAGCACTATACATGCTCTTCTTCAGTGCACACCTGATTTGTCTAAACAAAACTGTACTCAATGCTTGGATTTTGCTTTCTCGGAGATTGCAGCCTATTGTGATGGAATGAGAGGTGGTCGGTATACAGGACCAAGTTGTTCTGTTAGATATGAGGACTACGTGTTTTTTGATCCCATAGACATAGTCGTCGATGCACCAGCATCACAGCCTTCCCAAGTAGTTCCCCCTCCTCACGCATCTGCCGCAGAAGAATTACAAGGAAAGAGCAGGACATCACGAACGGTCATTGCTATAGTTATTCCGGTTGTTGCCGTTGTCGTAGTCATCGTCATCGTCCTTATCTGGATTTATTTAGGAGCGAGAAAAAAACCGAGACACGACTGTATGGAATTGGAAGGCGAAGTCCAAGGTGAAGGTGGAGGTGGAGGTGAAGGTGATAATGACATTAAAGCTTCTGAGTTGTTGCAATTTGACTTTGCAACCATCAAATTTGCTACAAGCAACTTCTCTGATGCGAATAAGGTTGGCCAAGGTGGATTTGGAACTGTTTATAAGGCCATGCTCTCTGATGGACAAGAAGTTGCTATCAAAAGGTTGTCTAACAATTCTGACCAAGGAGAAACAGAATTTAAGAACGAAGTGTTGCTAACGGGGAAGCTTCAGCACCGAAACTTAGTTAAGCTGCTAGGTTTTTGTTTAGAAAGAAGAGAAAGGCTACTGATATATGAGTTCGTCCCCAACAAAAGTCTTGATTATTTCATATTCGATCCAATCAAGCGTGCAATTTTGGATTGGGAAGTACGCTCCAAAATCATAAGAGGCATTGCTCGTGGTCTTCTTTATCTTCATGAAGATTCTCGACTACAAATTATTCACCGAGATTTGAAAACAAGTAACATTCTGTTAGATGCAGAGTTAAGCCCAAAAATATCAGATTTTGGCATGGCAAGATTGTTTGATGTCAATCAAACTCAAGGCAATACAATGACGATTGTAGGGACTTTTGGATATATGGCTCCTGAGTACATTAAACATGGACAATTCTCAATAAAGTCAGATGTCTTTAGTCTTGGCGTAATGATTCTAGAAATTGTGTGTGGCCGGAGAAACGCTGAGATTCGTAACGGGGACAATGTAGAGGATCTACTAAGCTTTGCATGGAAAAATTGGAGTGCAGGGACGACTTTGAATATTGTAGATCCCATATTAAAGGATGGTCCAAAGAATGAAATAATAAGATGCATCCACATTGGGTTGCTCTGTGTTCAAGAAGATTTGGCTGATAGACCAACAATGTCTTCAGTTTTGCTAATGCTTAACAGCAACTCTTACTCAATCACTCAACCTTCAGAACCTCCATTTTTAATGCAACGTAAAAGATTATTATATGTGTCGTCAACATTGTCAAGTGAGCAATATTCAGAGGCCACAAGGTCAAGTGATTCAGGAAGTCAATCTGCTTTAGGATCAACAAATAAGTCTTCAATTACAGATATATCTGCTCGCTAG 3885 0.4232 MLPITLLLLCFPIEFLISRTQAEPTYSYHFCLNTTTFAPNSTYQTNLKTLLSTISSNSNQSDGFYNTTTGQNNPNNTLYGLFLCRGDVTTQTCQDCVSTATKQVLQRCPNEKEAFIWYDECLLQYSDESFFSTVQERPLIPLSNIANASDQSSFMQLVGVTLHAVAEEAANGENGKKFATKEADFTGSTILYTLGQCTPDLSTPDCNKCLQIAIANLPNCCNGKQGGKVLTPSCYVRYEVYPFYRSVALAPVPRPDLTQNHKPFCNKSNTFWKCRTSNISIIVAIVVPIVVAVALFILGCCYLRKRASNKYNYKTYIRNSIREDLSDVESLQFDLATVQAATNSFSDENKIGQGGFGVVYKGVLPNGQEIAVKRLSVTSLQGAIEFRNEATLVAKLQHRNLVRVLGFCLEGREKMLIYEYMQNKSLDHFLFDPVKQRELDWSRRYKIIVGIARGIQYLHEDSQLRIIHRDLKASNVLLDENMNSKISDFGMAKIFQADQTQVNTGRIVGTYGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGKKNTDFYQSNQANDLLSYENPADRPSMGTVVLVLNSYSVTLALPRQPASFLRGRATPEDCAMIPSLVLLSFLVILKSEANDDQLSFLYHECNEFLGNFTRGSTYNSNRDALLQEIISDRKIDYGFYNFSYGKDSDKVNAIGICRGDVKPDECRGCLGKSAALLINQCEVQKEAIGYYDKCTLRYSNDSIFGVWESETSKVHCNQDNKKMGYGFNQMLHGLLDRLKSTAADGDSRRKFAEDSAPVLQSSNSTIHALLQCTPDLSKQNCTQCLDFAFSEIAAYCDGMRGGRYTGPSCSVRYEDYVFFDPIDIVVDAPASQPSQVVPPPHASAAEELQGKSRTSRTVIAIVIPVVAVVVVIVIVLIWIYLGARKKPRHDCMELEGEVQGEGGGGGEGDNDIKASELLQFDFATIKFATSNFSDANKVGQGGFGTVYKAMLSDGQEVAIKRLSNNSDQGETEFKNEVLLTGKLQHRNLVKLLGFCLERRERLLIYEFVPNKSLDYFIFDPIKRAILDWEVRSKIIRGIARGLLYLHEDSRLQIIHRDLKTSNILLDAELSPKISDFGMARLFDVNQTQGNTMTIVGTFGYMAPEYIKHGQFSIKSDVFSLGVMILEIVCGRRNAEIRNGDNVEDLLSFAWKNWSAGTTLNIVDPILKDGPKNEIIRCIHIGLLCVQEDLADRPTMSSVLLMLNSNSYSITQPSEPPFLMQRKRLLYVSSTLSSEQYSEATRSSDSGSQSALGSTNKSSITDISAR. 1295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07947 1294 CDD STKc_IRAK 967 1232 - -
Seca7g07947 1294 FunFam Cysteine-rich receptor-like protein kinase 25 138 243 - -
Seca7g07947 1294 FunFam Cysteine-rich receptor-like protein kinase 10 305 420 - -
Seca7g07947 1294 FunFam Cysteine-rich receptor-like protein kinase 10 740 847 - -
Seca7g07947 1294 ProSiteProfiles Gnk2-homologous domain profile. 738 847 IPR002902 -
Seca7g07947 1294 MobiDBLite consensus disorder prediction 1265 1294 - -
Seca7g07947 1294 Pfam Protein tyrosine and serine/threonine kinase 348 561 IPR001245 GO:0004672|GO:0006468
Seca7g07947 1294 SMART serkin_6 345 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07947 1294 SMART serkin_6 961 1247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07947 1294 ProSiteProfiles Protein kinase domain profile. 345 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07947 1294 Pfam Salt stress response/antifungal 31 127 IPR002902 -
Seca7g07947 1294 Pfam Salt stress response/antifungal 634 729 IPR002902 -
Seca7g07947 1294 Pfam Salt stress response/antifungal 745 845 IPR002902 -
Seca7g07947 1294 Pfam Salt stress response/antifungal 147 240 IPR002902 -
Seca7g07947 1294 CDD STKc_IRAK 351 578 - -
Seca7g07947 1294 ProSiteProfiles Gnk2-homologous domain profile. 25 130 IPR002902 -
Seca7g07947 1294 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 627 732 - -
Seca7g07947 1294 Gene3D Phosphorylase Kinase; domain 1 305 420 - -
Seca7g07947 1294 Gene3D Phosphorylase Kinase; domain 1 936 1036 - -
Seca7g07947 1294 ProSitePatterns Protein kinases ATP-binding region signature. 967 989 IPR017441 GO:0005524
Seca7g07947 1294 Gene3D - 139 243 IPR038408 -
Seca7g07947 1294 Gene3D - 738 847 IPR038408 -
Seca7g07947 1294 Gene3D - 626 731 IPR038408 -
Seca7g07947 1294 Gene3D - 23 130 IPR038408 -
Seca7g07947 1294 SUPERFAMILY Protein kinase-like (PK-like) 333 597 IPR011009 -
Seca7g07947 1294 FunFam cysteine-rich receptor-like protein kinase 10 421 563 - -
Seca7g07947 1294 FunFam cysteine-rich receptor-like protein kinase 10 1037 1238 - -
Seca7g07947 1294 SUPERFAMILY Protein kinase-like (PK-like) 946 1268 IPR011009 -
Seca7g07947 1294 ProSiteProfiles Protein kinase domain profile. 961 1247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07947 1294 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 693 1293 - -
Seca7g07947 1294 FunFam Cysteine-rich receptor-like protein kinase 10 931 1036 - -
Seca7g07947 1294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Seca7g07947 1294 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Seca7g07947 1294 ProSiteProfiles Gnk2-homologous domain profile. 629 732 IPR002902 -
Seca7g07947 1294 Pfam Protein kinase domain 962 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07947 1294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1082 1094 IPR008271 GO:0004672|GO:0006468
Seca7g07947 1294 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 130 - -
Seca7g07947 1294 Gene3D Transferase(Phosphotransferase) domain 1 1037 1243 - -
Seca7g07947 1294 Gene3D Transferase(Phosphotransferase) domain 1 421 585 - -
Seca7g07947 1294 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07947 Seca-Chr7 184015208 184054921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07947 15 602 Receptor kinase-like Gene Family AT4G05200 47.950 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca7g07947 Pkinase 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07947 - - lang:109353867 1285.78