Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g07944 | ATGCATTGGTGCACCTTTTCACCACTGCTACTTCCAATTCTGTTATTATCCCTCACATTCCTCAACCACACAGCATATGCTACACACATATCTTACCCCCCACCACCTTACTATAACTGTTCAAGCAACAACACTAATTACGCACCCAATAGCATCTACCACACCAACCTTCAAACTCTTCTGTCGCGCCTTTCCTCAAACGCCACAACCACTACCCAAATCTACAGCACCATCGTTGAGGAAGGCAACGACAACACTGTCTATGGCCTCTTCATGTGCAGAATTGGAGACGGAGAACCCGCAAAATGTAAAGAGTGCGTGATTAACTCAACCAAGGCGATAACAAAACTGTGTCCCATGGCAAAAGAAGCCATACTTTGGGATAGTAACTGCTTCGTGCGTTACTCCAATCGCTATTTCTTCACCACAGTGGAAGAGAGTCCTAAACTCAGCTTCATGAATGAGCAGGACTATGTGGGACAGGTTGGCCACTTCAACAGCATATTATGGGATACCATGAATGAAGTGAGAAACAGAACAGCGAGTGCTCCTCTTGGATCCATGAAATATGGTTACAAGTCAGTGAACATCACAGCTAATCAAACGCTTTATGCAATGGAATATTGCATCCCATACCTTTCCTCAGATAATTGCAGTTGGTGTCTCAGTGATGCCATAGCAGAAATTCCAACCTCTTGTTGCAGAGGAAAAACTGGTGGCAGAGTTATTTACCCAAGTTGTGGTCTTAGATATGAACTATATCCATTTTACCATCCACTCGCTTCGAATTCGACACCACTGCCGCAATTACCTGCTGCGACAGTTGTTGATCCTCTTAACCCTTTGGCATCACCAGGGAAAGGAAAACATTCAAGATCAGCAATCGTTGTGGTGGTCCCAGTTGTTGTGTCGGTGGTACTTTTAACCTTGGCTTGCGGCTGTTTTCTAAGCAATGGAAGGAGGAAGAATCATGAGACTATTCTCAAAGAAAGCTTTGGGAATGAAGTTACTGTTTTGGAATCCTTGTGGTTTGATTTAGGGGAAATTGAATCTGCAACAAACAAGTTTGCTAAAGAAAATATGATTGGAAAAGGAGGATTTGGAGAAGTTTATAAGGGTGTACTTTCCAATGGACAGGAGATAGCTGTGAAGAGGCTCTCGGGAAGCTCTGGGCAAGGCGCAATAGAATTTAAAAATGAGGTTCTTGTTATAGCTCAACTTCAACACAGAAATCTAGTGAAATTACAAGGATTTTGCCTGGATGGGCAAGAAAAGATACTCATATATGAATATGTACCTAACAAGAGTCTTGATTATTTTTTATTTGCTAATGTCCATAATGATCCCAATGCTTACTATAACTGCACAAGGAACATCACTTTTGCTACCTCTACCGTTTACCGCTCCAACGTTAAAACTCTCTTAGATTGGCTCTCCTCCAATAGTACTAATAACGCCAGATACTACAACACCACAGTTACAAGCAAAACCACCGGGGACACTGTCTATGGTCTCTTCGTTTGTAGAAGAGACATCCCCGACCCCAAAATCTGCGAATTGTGTGTTATAAAAGCAGCCAAACTCATACAAACTCTGTGCACCACGGCAACAGAAGCCATCATTTGGTACCATGTATGCCACGTGCGCTATTCAGATCGTCGTTTCTTTTCGACCATGGAAGAAAGTCCTAAAATTTCATTTATGAATACTCGGGATTATGCGGATGAGGTTGGGCGTTTCAGCAATATTCTATGGGATTTGTTGAACGATTTGAAAAGTGAGGCAACAAATGCTTGTGGTAAATGGGCTGACAAGTCAGTGAACATCACAGAAAGGCAAAAGCTATATGGGTCTGCTTCGTGCGTCCCGTACCTATCCAAGGAAGACTGCAGCTGGTGTCTTCATGATGCTATAGCAGAAATTTCAGCTGTTTGTTGCAGAGGAAAATCTGGAGGCAGAGTAATATATCCGAGTTGCAGTGTTAGATACGAAATATATCCATTCTTCTTGCCAAATGCCACTTGGGTGCCACCACCGTCACTGCCCACGAGTCGAAAAGGAAGAAAGAAGACACCAACAATAATTTTGATCATTGTTCCCATTGTTGTTTCACTGGTGCTTTTAGCGATGGGCTGCAGTTATTTTCTATATAGAAAAGGAAGAAAGAATCAACATGATATTCTCAAAAATGACATTACCACTTTGGAGTCCTTGCAATTTGAATTAACGAAAATAGAAGCTGCAACAAACAGGTTTGCCACAGAAAATAGGATAGGCAAAGGCGGATTTGGAGAAGTCTATAAGGGTATTCTTTCAGATGGACAAGAAATTGCTGTGAAGAGACTCACAAGAAGCTCTGGGCAAGGTGCAGTAGAGTTTAAAAATGAGGTTCAAGTTATAGCCAAGCTTCAACACAGAAATCTAGTGAGGTTACTAGGATTTTGTTTGGAAGGTGAAGAAAAGATACTTATCTATGAGTATGTGCCAAACAAGAGCCTTGATTACTTTTTATTTGATCCCCAGAAGCAAAAACTGTTACCTTGGTCTCAACGTCAGAAGATCATCAAAGGAATTGCCCGAGGAATTCTTTATCTCCATGAAGATTCTCGCCTCAAAATAATACATCGTGACCTGAAACCTAGCAATGTTTTGTTAGACAGTAATATGAATCCAAAAATTTCAGACTTTGGCATGGCCAGAATTGTTGCTGCAGATCAAATTGAAGAAAGTACAGGCAGAATTGTTGGGACATATGGTTATATGCCTCCAGAATATGCAATGCATGGATACTTCTCAGTTAAATCTGATGTGTTTAGTTTTGGAGTCATGGTTCTAGAGATTATTAGTGGAAAGAGGAAAAGTTGTTCGTCTGATGCAGAGTGTGTTGATGACATCCGGAGATATACTTGGACAAAATGGACAGAGCAAACGCCACTGGAACTACTGGACCCTAATATAGAAGGACCTTATTCCCCAGAAGAAGTCATCAAATGCATCCACATTGGTTTGTTATGTGTTCAGGAAGATCCAAATGATAGGCCTACGATGGCAACAATTGTTTTCTACCTCAACAGCCCTTCAATCAATTTGCCATCCCCTCATGAACCACCGTATTTTAAGCGTAGTAGAACAGAAGAAAACAAGGGGACCAACAAGGAATTTGATAATACCAGTGATTCCATCAATGAAATTACTCTGACAAAATTCTTTCCTCGTTAA | 3219 | 0.4132 | MHWCTFSPLLLPILLLSLTFLNHTAYATHISYPPPPYYNCSSNNTNYAPNSIYHTNLQTLLSRLSSNATTTTQIYSTIVEEGNDNTVYGLFMCRIGDGEPAKCKECVINSTKAITKLCPMAKEAILWDSNCFVRYSNRYFFTTVEESPKLSFMNEQDYVGQVGHFNSILWDTMNEVRNRTASAPLGSMKYGYKSVNITANQTLYAMEYCIPYLSSDNCSWCLSDAIAEIPTSCCRGKTGGRVIYPSCGLRYELYPFYHPLASNSTPLPQLPAATVVDPLNPLASPGKGKHSRSAIVVVVPVVVSVVLLTLACGCFLSNGRRKNHETILKESFGNEVTVLESLWFDLGEIESATNKFAKENMIGKGGFGEVYKGVLSNGQEIAVKRLSGSSGQGAIEFKNEVLVIAQLQHRNLVKLQGFCLDGQEKILIYEYVPNKSLDYFLFANVHNDPNAYYNCTRNITFATSTVYRSNVKTLLDWLSSNSTNNARYYNTTVTSKTTGDTVYGLFVCRRDIPDPKICELCVIKAAKLIQTLCTTATEAIIWYHVCHVRYSDRRFFSTMEESPKISFMNTRDYADEVGRFSNILWDLLNDLKSEATNACGKWADKSVNITERQKLYGSASCVPYLSKEDCSWCLHDAIAEISAVCCRGKSGGRVIYPSCSVRYEIYPFFLPNATWVPPPSLPTSRKGRKKTPTIILIIVPIVVSLVLLAMGCSYFLYRKGRKNQHDILKNDITTLESLQFELTKIEAATNRFATENRIGKGGFGEVYKGILSDGQEIAVKRLTRSSGQGAVEFKNEVQVIAKLQHRNLVRLLGFCLEGEEKILIYEYVPNKSLDYFLFDPQKQKLLPWSQRQKIIKGIARGILYLHEDSRLKIIHRDLKPSNVLLDSNMNPKISDFGMARIVAADQIEESTGRIVGTYGYMPPEYAMHGYFSVKSDVFSFGVMVLEIISGKRKSCSSDAECVDDIRRYTWTKWTEQTPLELLDPNIEGPYSPEEVIKCIHIGLLCVQEDPNDRPTMATIVFYLNSPSINLPSPHEPPYFKRSRTEENKGTNKEFDNTSDSINEITLTKFFPR. | 1073 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g07944 | 1072 | ProSiteProfiles | Protein kinase domain profile. | 356 | 669 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g07944 | 1072 | MobiDBLite | consensus disorder prediction | 1038 | 1053 | - | - | |
Seca7g07944 | 1072 | ProSiteProfiles | Gnk2-homologous domain profile. | 561 | 668 | IPR002902 | - | |
Seca7g07944 | 1072 | MobiDBLite | consensus disorder prediction | 1033 | 1057 | - | - | |
Seca7g07944 | 1072 | ProSiteProfiles | Gnk2-homologous domain profile. | 449 | 555 | IPR002902 | - | |
Seca7g07944 | 1072 | Gene3D | Transferase(Phosphotransferase) domain 1 | 828 | 1029 | - | - | |
Seca7g07944 | 1072 | Gene3D | Phosphorylase Kinase; domain 1 | 318 | 431 | - | - | |
Seca7g07944 | 1072 | Gene3D | Phosphorylase Kinase; domain 1 | 715 | 827 | - | - | |
Seca7g07944 | 1072 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 | 318 | 431 | - | - | |
Seca7g07944 | 1072 | SUPERFAMILY | Protein kinase-like (PK-like) | 738 | 1043 | IPR011009 | - | |
Seca7g07944 | 1072 | SMART | serkin_6 | 752 | 1028 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g07944 | 1072 | ProSiteProfiles | Gnk2-homologous domain profile. | 35 | 140 | IPR002902 | - | |
Seca7g07944 | 1072 | Pfam | Salt stress response/antifungal | 40 | 137 | IPR002902 | - | |
Seca7g07944 | 1072 | Pfam | Salt stress response/antifungal | 161 | 254 | IPR002902 | - | |
Seca7g07944 | 1072 | Pfam | Salt stress response/antifungal | 455 | 552 | IPR002902 | - | |
Seca7g07944 | 1072 | Pfam | Salt stress response/antifungal | 575 | 665 | IPR002902 | - | |
Seca7g07944 | 1072 | SUPERFAMILY | Protein kinase-like (PK-like) | 332 | 449 | IPR011009 | - | |
Seca7g07944 | 1072 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 526 | 1066 | - | - | |
Seca7g07944 | 1072 | ProSitePatterns | Protein kinases ATP-binding region signature. | 758 | 780 | IPR017441 | GO:0005524 | |
Seca7g07944 | 1072 | ProSiteProfiles | Gnk2-homologous domain profile. | 146 | 256 | IPR002902 | - | |
Seca7g07944 | 1072 | ProSiteProfiles | Protein kinase domain profile. | 752 | 1028 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g07944 | 1072 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 | 35 | 140 | - | - | |
Seca7g07944 | 1072 | Gene3D | - | 36 | 140 | IPR038408 | - | |
Seca7g07944 | 1072 | Gene3D | - | 564 | 668 | IPR038408 | - | |
Seca7g07944 | 1072 | Gene3D | - | 149 | 256 | IPR038408 | - | |
Seca7g07944 | 1072 | Gene3D | - | 449 | 555 | IPR038408 | - | |
Seca7g07944 | 1072 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 | 717 | 827 | - | - | |
Seca7g07944 | 1072 | CDD | STKc_IRAK | 758 | 1024 | - | - | |
Seca7g07944 | 1072 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 873 | 885 | IPR008271 | GO:0004672|GO:0006468 | |
Seca7g07944 | 1072 | FunFam | cysteine-rich receptor-like protein kinase 10 | 828 | 1030 | - | - | |
Seca7g07944 | 1072 | Pfam | Protein kinase domain | 753 | 1020 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g07944 | 1072 | Pfam | Protein tyrosine and serine/threonine kinase | 359 | 455 | IPR001245 | GO:0004672|GO:0006468 | |
Seca7g07944 | 1072 | ProSitePatterns | Protein kinases ATP-binding region signature. | 362 | 384 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g07944 | Seca-Chr7 | 183949696 | 183966419 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g07944 | 30 | 444 | Receptor kinase-like Gene Family | AT4G05200 | 42.959 | 8.66e-97 | 320 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca7g07944 | Pkinase | 2.4e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g07944 | - | - | gmx:100793219 | 942.954 |