Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07944 ATGCATTGGTGCACCTTTTCACCACTGCTACTTCCAATTCTGTTATTATCCCTCACATTCCTCAACCACACAGCATATGCTACACACATATCTTACCCCCCACCACCTTACTATAACTGTTCAAGCAACAACACTAATTACGCACCCAATAGCATCTACCACACCAACCTTCAAACTCTTCTGTCGCGCCTTTCCTCAAACGCCACAACCACTACCCAAATCTACAGCACCATCGTTGAGGAAGGCAACGACAACACTGTCTATGGCCTCTTCATGTGCAGAATTGGAGACGGAGAACCCGCAAAATGTAAAGAGTGCGTGATTAACTCAACCAAGGCGATAACAAAACTGTGTCCCATGGCAAAAGAAGCCATACTTTGGGATAGTAACTGCTTCGTGCGTTACTCCAATCGCTATTTCTTCACCACAGTGGAAGAGAGTCCTAAACTCAGCTTCATGAATGAGCAGGACTATGTGGGACAGGTTGGCCACTTCAACAGCATATTATGGGATACCATGAATGAAGTGAGAAACAGAACAGCGAGTGCTCCTCTTGGATCCATGAAATATGGTTACAAGTCAGTGAACATCACAGCTAATCAAACGCTTTATGCAATGGAATATTGCATCCCATACCTTTCCTCAGATAATTGCAGTTGGTGTCTCAGTGATGCCATAGCAGAAATTCCAACCTCTTGTTGCAGAGGAAAAACTGGTGGCAGAGTTATTTACCCAAGTTGTGGTCTTAGATATGAACTATATCCATTTTACCATCCACTCGCTTCGAATTCGACACCACTGCCGCAATTACCTGCTGCGACAGTTGTTGATCCTCTTAACCCTTTGGCATCACCAGGGAAAGGAAAACATTCAAGATCAGCAATCGTTGTGGTGGTCCCAGTTGTTGTGTCGGTGGTACTTTTAACCTTGGCTTGCGGCTGTTTTCTAAGCAATGGAAGGAGGAAGAATCATGAGACTATTCTCAAAGAAAGCTTTGGGAATGAAGTTACTGTTTTGGAATCCTTGTGGTTTGATTTAGGGGAAATTGAATCTGCAACAAACAAGTTTGCTAAAGAAAATATGATTGGAAAAGGAGGATTTGGAGAAGTTTATAAGGGTGTACTTTCCAATGGACAGGAGATAGCTGTGAAGAGGCTCTCGGGAAGCTCTGGGCAAGGCGCAATAGAATTTAAAAATGAGGTTCTTGTTATAGCTCAACTTCAACACAGAAATCTAGTGAAATTACAAGGATTTTGCCTGGATGGGCAAGAAAAGATACTCATATATGAATATGTACCTAACAAGAGTCTTGATTATTTTTTATTTGCTAATGTCCATAATGATCCCAATGCTTACTATAACTGCACAAGGAACATCACTTTTGCTACCTCTACCGTTTACCGCTCCAACGTTAAAACTCTCTTAGATTGGCTCTCCTCCAATAGTACTAATAACGCCAGATACTACAACACCACAGTTACAAGCAAAACCACCGGGGACACTGTCTATGGTCTCTTCGTTTGTAGAAGAGACATCCCCGACCCCAAAATCTGCGAATTGTGTGTTATAAAAGCAGCCAAACTCATACAAACTCTGTGCACCACGGCAACAGAAGCCATCATTTGGTACCATGTATGCCACGTGCGCTATTCAGATCGTCGTTTCTTTTCGACCATGGAAGAAAGTCCTAAAATTTCATTTATGAATACTCGGGATTATGCGGATGAGGTTGGGCGTTTCAGCAATATTCTATGGGATTTGTTGAACGATTTGAAAAGTGAGGCAACAAATGCTTGTGGTAAATGGGCTGACAAGTCAGTGAACATCACAGAAAGGCAAAAGCTATATGGGTCTGCTTCGTGCGTCCCGTACCTATCCAAGGAAGACTGCAGCTGGTGTCTTCATGATGCTATAGCAGAAATTTCAGCTGTTTGTTGCAGAGGAAAATCTGGAGGCAGAGTAATATATCCGAGTTGCAGTGTTAGATACGAAATATATCCATTCTTCTTGCCAAATGCCACTTGGGTGCCACCACCGTCACTGCCCACGAGTCGAAAAGGAAGAAAGAAGACACCAACAATAATTTTGATCATTGTTCCCATTGTTGTTTCACTGGTGCTTTTAGCGATGGGCTGCAGTTATTTTCTATATAGAAAAGGAAGAAAGAATCAACATGATATTCTCAAAAATGACATTACCACTTTGGAGTCCTTGCAATTTGAATTAACGAAAATAGAAGCTGCAACAAACAGGTTTGCCACAGAAAATAGGATAGGCAAAGGCGGATTTGGAGAAGTCTATAAGGGTATTCTTTCAGATGGACAAGAAATTGCTGTGAAGAGACTCACAAGAAGCTCTGGGCAAGGTGCAGTAGAGTTTAAAAATGAGGTTCAAGTTATAGCCAAGCTTCAACACAGAAATCTAGTGAGGTTACTAGGATTTTGTTTGGAAGGTGAAGAAAAGATACTTATCTATGAGTATGTGCCAAACAAGAGCCTTGATTACTTTTTATTTGATCCCCAGAAGCAAAAACTGTTACCTTGGTCTCAACGTCAGAAGATCATCAAAGGAATTGCCCGAGGAATTCTTTATCTCCATGAAGATTCTCGCCTCAAAATAATACATCGTGACCTGAAACCTAGCAATGTTTTGTTAGACAGTAATATGAATCCAAAAATTTCAGACTTTGGCATGGCCAGAATTGTTGCTGCAGATCAAATTGAAGAAAGTACAGGCAGAATTGTTGGGACATATGGTTATATGCCTCCAGAATATGCAATGCATGGATACTTCTCAGTTAAATCTGATGTGTTTAGTTTTGGAGTCATGGTTCTAGAGATTATTAGTGGAAAGAGGAAAAGTTGTTCGTCTGATGCAGAGTGTGTTGATGACATCCGGAGATATACTTGGACAAAATGGACAGAGCAAACGCCACTGGAACTACTGGACCCTAATATAGAAGGACCTTATTCCCCAGAAGAAGTCATCAAATGCATCCACATTGGTTTGTTATGTGTTCAGGAAGATCCAAATGATAGGCCTACGATGGCAACAATTGTTTTCTACCTCAACAGCCCTTCAATCAATTTGCCATCCCCTCATGAACCACCGTATTTTAAGCGTAGTAGAACAGAAGAAAACAAGGGGACCAACAAGGAATTTGATAATACCAGTGATTCCATCAATGAAATTACTCTGACAAAATTCTTTCCTCGTTAA 3219 0.4132 MHWCTFSPLLLPILLLSLTFLNHTAYATHISYPPPPYYNCSSNNTNYAPNSIYHTNLQTLLSRLSSNATTTTQIYSTIVEEGNDNTVYGLFMCRIGDGEPAKCKECVINSTKAITKLCPMAKEAILWDSNCFVRYSNRYFFTTVEESPKLSFMNEQDYVGQVGHFNSILWDTMNEVRNRTASAPLGSMKYGYKSVNITANQTLYAMEYCIPYLSSDNCSWCLSDAIAEIPTSCCRGKTGGRVIYPSCGLRYELYPFYHPLASNSTPLPQLPAATVVDPLNPLASPGKGKHSRSAIVVVVPVVVSVVLLTLACGCFLSNGRRKNHETILKESFGNEVTVLESLWFDLGEIESATNKFAKENMIGKGGFGEVYKGVLSNGQEIAVKRLSGSSGQGAIEFKNEVLVIAQLQHRNLVKLQGFCLDGQEKILIYEYVPNKSLDYFLFANVHNDPNAYYNCTRNITFATSTVYRSNVKTLLDWLSSNSTNNARYYNTTVTSKTTGDTVYGLFVCRRDIPDPKICELCVIKAAKLIQTLCTTATEAIIWYHVCHVRYSDRRFFSTMEESPKISFMNTRDYADEVGRFSNILWDLLNDLKSEATNACGKWADKSVNITERQKLYGSASCVPYLSKEDCSWCLHDAIAEISAVCCRGKSGGRVIYPSCSVRYEIYPFFLPNATWVPPPSLPTSRKGRKKTPTIILIIVPIVVSLVLLAMGCSYFLYRKGRKNQHDILKNDITTLESLQFELTKIEAATNRFATENRIGKGGFGEVYKGILSDGQEIAVKRLTRSSGQGAVEFKNEVQVIAKLQHRNLVRLLGFCLEGEEKILIYEYVPNKSLDYFLFDPQKQKLLPWSQRQKIIKGIARGILYLHEDSRLKIIHRDLKPSNVLLDSNMNPKISDFGMARIVAADQIEESTGRIVGTYGYMPPEYAMHGYFSVKSDVFSFGVMVLEIISGKRKSCSSDAECVDDIRRYTWTKWTEQTPLELLDPNIEGPYSPEEVIKCIHIGLLCVQEDPNDRPTMATIVFYLNSPSINLPSPHEPPYFKRSRTEENKGTNKEFDNTSDSINEITLTKFFPR. 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07944 1072 ProSiteProfiles Protein kinase domain profile. 356 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07944 1072 MobiDBLite consensus disorder prediction 1038 1053 - -
Seca7g07944 1072 ProSiteProfiles Gnk2-homologous domain profile. 561 668 IPR002902 -
Seca7g07944 1072 MobiDBLite consensus disorder prediction 1033 1057 - -
Seca7g07944 1072 ProSiteProfiles Gnk2-homologous domain profile. 449 555 IPR002902 -
Seca7g07944 1072 Gene3D Transferase(Phosphotransferase) domain 1 828 1029 - -
Seca7g07944 1072 Gene3D Phosphorylase Kinase; domain 1 318 431 - -
Seca7g07944 1072 Gene3D Phosphorylase Kinase; domain 1 715 827 - -
Seca7g07944 1072 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 318 431 - -
Seca7g07944 1072 SUPERFAMILY Protein kinase-like (PK-like) 738 1043 IPR011009 -
Seca7g07944 1072 SMART serkin_6 752 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07944 1072 ProSiteProfiles Gnk2-homologous domain profile. 35 140 IPR002902 -
Seca7g07944 1072 Pfam Salt stress response/antifungal 40 137 IPR002902 -
Seca7g07944 1072 Pfam Salt stress response/antifungal 161 254 IPR002902 -
Seca7g07944 1072 Pfam Salt stress response/antifungal 455 552 IPR002902 -
Seca7g07944 1072 Pfam Salt stress response/antifungal 575 665 IPR002902 -
Seca7g07944 1072 SUPERFAMILY Protein kinase-like (PK-like) 332 449 IPR011009 -
Seca7g07944 1072 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 526 1066 - -
Seca7g07944 1072 ProSitePatterns Protein kinases ATP-binding region signature. 758 780 IPR017441 GO:0005524
Seca7g07944 1072 ProSiteProfiles Gnk2-homologous domain profile. 146 256 IPR002902 -
Seca7g07944 1072 ProSiteProfiles Protein kinase domain profile. 752 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07944 1072 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 35 140 - -
Seca7g07944 1072 Gene3D - 36 140 IPR038408 -
Seca7g07944 1072 Gene3D - 564 668 IPR038408 -
Seca7g07944 1072 Gene3D - 149 256 IPR038408 -
Seca7g07944 1072 Gene3D - 449 555 IPR038408 -
Seca7g07944 1072 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 717 827 - -
Seca7g07944 1072 CDD STKc_IRAK 758 1024 - -
Seca7g07944 1072 ProSitePatterns Serine/Threonine protein kinases active-site signature. 873 885 IPR008271 GO:0004672|GO:0006468
Seca7g07944 1072 FunFam cysteine-rich receptor-like protein kinase 10 828 1030 - -
Seca7g07944 1072 Pfam Protein kinase domain 753 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07944 1072 Pfam Protein tyrosine and serine/threonine kinase 359 455 IPR001245 GO:0004672|GO:0006468
Seca7g07944 1072 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07944 Seca-Chr7 183949696 183966419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07944 30 444 Receptor kinase-like Gene Family AT4G05200 42.959 8.66e-97 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca7g07944 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07944 - - gmx:100793219 942.954