Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07929 ATGCAACTTGATCTGGAATCCTTGTCAGAAGCTACTTCTGGTGCCATTGGATCCCTTGTGAGCACCACTGTCTTGTACCCACTTGATACTTGCAAGACCAAATATCAAGCTGAAGTTCAAGCTCACAATCAACGAAAATACAGGAGGATTTCTGATGTTTTATGGGAAGCAATTTCTACCCGTCAGGTTCTTTCATTGTACCAAGGCCTTGGGACAAAAAACGTCCAGTCCTTCGTTTCATCATTTATTTATTTCTATGGATACAGCTACTTTAAGAAGCTATATTTGAAAAAAACTGGAAAGAAGAACATTGGAACAGCAGCAAACTTGATTGCTGCTACTGCATCTGGGCCCTTAGATACAGCATCCTCACGGATGCAGACAAGTGAATTTGGAAAATCCAAGGGATTCTGGAAGACCCTTTCAGAAGGTACATGGAGTGAGGCATTTGACGGTCTTGGCATATCTATTCTTTTAACAACAAATCCATCTATTCAGTATACTGCATTCGATCAGCTGAAACAGAGACTACTAAAGGGCAAGATGAGCAAGAAAACAGATACAAAGTCATCCCCAGAAGCACTTTCTGCATTTTCTGCTTTTATGCTGGGTGCAGTTTCAAAATGTGCTGCTACATGCTTGACATACCCGGCTATCAGATGTAAGGTCATGATTCAGGCTGCTGATTCAGATGATGGTAAGAGTACAGAAGCTGACAGGAAGGCACAGAGGACAATCTCTGGAGCACTCTATACTATTTGGAGAAGAGAAGGCCTTTTGGGATTTTTCAAAGGATTGCAGGCACAGATATTAAAAACTGTTTTGAGCTCTGCATTACTTCTGATGGTGAAGGAGAAGATCACAAAGTCCACATGGATTCTGATGCTCATGATCGGAAGATACCTATCTGTCAAACCCCCCAAATTGAAAGCAGCTTGA 939 0.4175 MQLDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAEVQAHNQRKYRRISDVLWEAISTRQVLSLYQGLGTKNVQSFVSSFIYFYGYSYFKKLYLKKTGKKNIGTAANLIAATASGPLDTASSRMQTSEFGKSKGFWKTLSEGTWSEAFDGLGISILLTTNPSIQYTAFDQLKQRLLKGKMSKKTDTKSSPEALSAFSAFMLGAVSKCAATCLTYPAIRCKVMIQAADSDDGKSTEADRKAQRTISGALYTIWRREGLLGFFKGLQAQILKTVLSSALLLMVKEKITKSTWILMLMIGRYLSVKPPKLKAA. 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07929 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 195 290 IPR018108 -
Seca7g07929 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Seca7g07929 312 Pfam Mitochondrial carrier protein 195 289 IPR018108 -
Seca7g07929 312 Pfam Mitochondrial carrier protein 7 98 IPR018108 -
Seca7g07929 312 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Seca7g07929 312 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Seca7g07929 312 PRINTS Mitochondrial carrier protein signature 105 127 IPR002067 GO:0055085
Seca7g07929 312 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 311 IPR045900 GO:0005347|GO:0006635|GO:0015217
Seca7g07929 312 Gene3D Mitochondrial carrier domain 6 291 IPR023395 -
Seca7g07929 312 FunFam Peroxisomal adenine nucleotide carrier 1 3 291 - -
Seca7g07929 312 SUPERFAMILY Mitochondrial carrier 8 286 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07929 Seca-Chr7 183801889 183806967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07929 23 308 Chloroplast and Mitochondria Gene Families AT1G25380 26.144 5.73e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07929 - - gmx:100795330 531.946