Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07927 ATGGCCACAGGAAAGCCTCCATGGAGTCAACAGTATCCCCAGGAGGTTTCGGCTCTTTTCTACATTGGGACAACTAAATCTCATCCACCCATACCTGAGCATCTGTCTGATGAGGCAAAGGACTTTCTGCTGAAATGCTTCCATAAGGAACCAAATTTAAGACCTTCTGCATCAGACTTGTTACTGCATCCATTCATCACCTGTGAGTATCAGGATTCTCGTTCAATATTACGTAGTACAATCAGGGACTCTTGCAATCAGATGGCAACATATGGGATGAACTCTAGAAACTTTTTGGATTCTGTACAGGGATCAACCTGCACGGGCCTAAAGGATGTCTGTCGGATAGATAGTATAAGGTTCTCCAGTGTATATCATGCAAATCTTCCAAGAGCAGGTTACTACCAGGGAGCAGACAACTATGATGATGACATGTGTCAGATAGATGATAAAGATGATTTTTTGGTTGCTTCATCAGTAAAATCTAAATCACTATTTGCTGCTGATGATATAAAGAGTTTCAATCCTATGTGCGAACCTGTGGATGACTGGCCTTGCAAGTTTGATGAAACTCAAAATTTGGAGAAAAGTAGAGTGGACTTGTCTCCAGATCAAACTATTAGGAAAACTATGAGGAGTTGTGAACCATCTAGTAAAGCGGAGAATGATTTCTCATTCTCAAGCGAGCCTCTTGGAGTTGAAGATGATGATGAAGTCACTGAGTCCAAAATAAGAGCTTTCCTGGATGATAAGGCCTTTGAACTGAAGAAGCTCCAAACACCACTTTATGAAGAATTTTTTAGCATATCAAATGCAGCCATTGCTCCTGCACCTGTTGCAGTTGCACAGAGTAAAGTCATTTCGGATGTGTCAAATATAACATCAAAAGGCAGGTCTCCTGGTCAAGCTAGAAGACGGTTCTCAATGGCTGGGAGTGCCAGTGTAGCAAGCCCTGGGAGTCATAGCAAATATCGATCAAAGCTTAGTGGTGCTTACAGTCGACCTTTGCAGGAAATTCAGTCATCTGAGCTTAATGAATCAAAGGAGACTCTTCATGATGCTGAGCTGGAAACATTTAGTGTTAGCTCAAGCTTCTCTGAGAGACAAAGAAAATGGAAAGAAGAACTTGTTGAAGAGCTTCAGTGGAAGCGAGGCAAGTTTTATGTTTCCTCTGACAATTAG 1182 0.4179 MATGKPPWSQQYPQEVSALFYIGTTKSHPPIPEHLSDEAKDFLLKCFHKEPNLRPSASDLLLHPFITCEYQDSRSILRSTIRDSCNQMATYGMNSRNFLDSVQGSTCTGLKDVCRIDSIRFSSVYHANLPRAGYYQGADNYDDDMCQIDDKDDFLVASSVKSKSLFAADDIKSFNPMCEPVDDWPCKFDETQNLEKSRVDLSPDQTIRKTMRSCEPSSKAENDFSFSSEPLGVEDDDEVTESKIRAFLDDKAFELKKLQTPLYEEFFSISNAAIAPAPVAVAQSKVISDVSNITSKGRSPGQARRRFSMAGSASVASPGSHSKYRSKLSGAYSRPLQEIQSSELNESKETLHDAELETFSVSSSFSERQRKWKEELVEELQWKRGKFYVSSDN. 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07927 393 MobiDBLite consensus disorder prediction 211 235 - -
Seca7g07927 393 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 221 - -
Seca7g07927 393 ProSiteProfiles Protein kinase domain profile. 1 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07927 393 SUPERFAMILY Protein kinase-like (PK-like) 1 88 IPR011009 -
Seca7g07927 393 Gene3D Transferase(Phosphotransferase) domain 1 1 107 - -
Seca7g07927 393 MobiDBLite consensus disorder prediction 211 225 - -
Seca7g07927 393 MobiDBLite consensus disorder prediction 313 331 - -
Seca7g07927 393 MobiDBLite consensus disorder prediction 310 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07927 Seca-Chr7 183783989 183787270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07927 1 372 MAP Kinase Kinase Kinase AT3G06030 40.691 1.00e-74 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Seca7g07927 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07927 - K20606 ccaj:109794823 572.392