Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07918 ATGGTTCATCAAAAACAAATGCTGCACCTTCAGATTTCTGCTGCTGCTTCTGCTTCTGCTACCTATGTTTTCCTTTGCTTCACTGCAACCGTTACAGTGATAACCACAATACAAGCACAAACTGACCAGTCCTTCGTCACCAATTACTGTCCAAACACAACCACTTTTTCTCCCAACACTACCTACCGAACTAACCTCAATCACCTCCTTACTTCTCTTGCATCAAATTCCACCCGCGAAAACGGCTTCTACCACACCACCGTCGGTGTCAACACCAACACCGTGTACGGCGCCTTCCTCTGCCGTGGAGATCTCACCGCCGAAGCATGCAAGGACTGTGTTTCCATCGCAGCCAAACAAGTGCTTAAAACGTGTCCTGTAGAGAAGGAATCAGTCATTTGGTTCGCCGAATGCATGATACGTTACTCCTACCAATCCTTCTTCTCCATGGCTGCAGAAGTGCCTGTTTTAGTTCTGATGAACACGGCAAGTGTATCGGACCAGAGTCGCTTCATGCAACTGTTGGGGAACACCATGAACTCAGTGGCGGTTAAAGCAGCAAGTGGTGGAGCTGACAAGAAATTTGCAACAGAAGAAGCAAATTTTTCCAGCTTCCAAACCTTGTACACGCTGGCACAGTGTACCCCTGATTTGTCACAGTTTGGCTGCCAAAAATGCCTCCAAATAGCAATTGGGCAAATACCTATAAAGCAAGGGGGAAGAGTGCTGATTCCAAGTTGTAATATTAGGTATGAGTTATATCCCTTTTACCACAAAGTCAATGTGCCCACCCCATCAGAAGAACCGAGGCCAAACACACAAGCTGGTGATTTAGTGGAAGTTGATTCAATTTATGCAGAAAAATCACGGATATCAATAGGGATTATCATCGCAATTGTAGTTCCAGTTGTGCTTTTCTTGCTGGTTACCTTCTTTGGCTGCTGGATCATATCAGTAAGGGCAAGAAGAAAGTACACTTCAGTTCTAGAAGAAAGTGTGCAAATCTCCAGGGTAGATGAATGCTTGCAATTTGATTTTGATACAATTATAGAGGCCACTAACAACTTCTGTGATGACAATAAATTAGGGGAAGGAGGATTTGGTGAGGTTTATAAGGGTAAACTATATAATGGGCAAGATATTGCTGTGAAGAGGCTATCAAGAAGCTCTAGGCAAGGCTTGGATGAATTTAAGAATGAGGTGGTTTTGGTAGCCAAACTACAACATAGAAATCTTGTCAGGCTTCTGGGATTTTGCTTGGATGGAGAAGAAAAAATGCTTATTTACGAATTCTTGCCTAACAAAAGCCTCGACCATTTTCTATTTGACCCTGAAAGAAGACAGCAGCTGAATTGGCCAAGTCGATACAAGATAATAGAAGGAATTGCTCGAGGGATGCTTTATCTTCATGAAGACTCTCGACTCAGAATCATACACCGTGATCTTAAAGCATCTAACATATTACTAGATGATAATTTAAATCCAAAAATTTCAGATTTTGGGATGGCAAGAATTTTTGGTGCTGATCAAACTCGAGGAAACACAAACAGAGTTGTTGGAACATTAGGTTACATGTCTCCGGAATATGCAATGCATGGAGAGTTTTCTGTTAAATCAGATGTGTATAGCTTTGGTGTCCTTGTTCTAGAGATAATAAGTGGGAAGAAGATCACATCCTTCCATGAATCAGGCTATGCTGAGGACCTCTTGAACTATGCTTGGAAAAAATGGAGTGATGGGATGCCATTGGAGTTACTGGATGTGAATTTGAGAGATTCATACTCAAGAGTTGAAGTCATAAGATGCATCCATGTTGGGTTATCTTGTGTTCAAGAAGATCCAGCTCAAAGGCCAACCATGCAGGCAATAGTTCTATTGCTAAGCAGTCATTCTGTTACTCTTGAACGACCTGAACGACCTGCTGGTTATATTCATAGCAAAACTCAACAGAGCTTCCCAACAAAAGAGTTTGAGAACTCAGACAAGTCTACAAACCAATCAGTCTCAGTCTCTGTTGATGAAGCATCCATCACTCAGGTGTACCCTCGATAG 2052 0.4235 MVHQKQMLHLQISAAASASATYVFLCFTATVTVITTIQAQTDQSFVTNYCPNTTTFSPNTTYRTNLNHLLTSLASNSTRENGFYHTTVGVNTNTVYGAFLCRGDLTAEACKDCVSIAAKQVLKTCPVEKESVIWFAECMIRYSYQSFFSMAAEVPVLVLMNTASVSDQSRFMQLLGNTMNSVAVKAASGGADKKFATEEANFSSFQTLYTLAQCTPDLSQFGCQKCLQIAIGQIPIKQGGRVLIPSCNIRYELYPFYHKVNVPTPSEEPRPNTQAGDLVEVDSIYAEKSRISIGIIIAIVVPVVLFLLVTFFGCWIISVRARRKYTSVLEESVQISRVDECLQFDFDTIIEATNNFCDDNKLGEGGFGEVYKGKLYNGQDIAVKRLSRSSRQGLDEFKNEVVLVAKLQHRNLVRLLGFCLDGEEKMLIYEFLPNKSLDHFLFDPERRQQLNWPSRYKIIEGIARGMLYLHEDSRLRIIHRDLKASNILLDDNLNPKISDFGMARIFGADQTRGNTNRVVGTLGYMSPEYAMHGEFSVKSDVYSFGVLVLEIISGKKITSFHESGYAEDLLNYAWKKWSDGMPLELLDVNLRDSYSRVEVIRCIHVGLSCVQEDPAQRPTMQAIVLLLSSHSVTLERPERPAGYIHSKTQQSFPTKEFENSDKSTNQSVSVSVDEASITQVYPR. 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07918 683 Gene3D Phosphorylase Kinase; domain 1 317 431 - -
Seca7g07918 683 CDD STKc_IRAK 362 624 - -
Seca7g07918 683 ProSiteProfiles Protein kinase domain profile. 356 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07918 683 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 43 147 - -
Seca7g07918 683 Pfam Salt stress response/antifungal 165 254 IPR002902 -
Seca7g07918 683 Pfam Salt stress response/antifungal 50 143 IPR002902 -
Seca7g07918 683 SMART serkin_6 356 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07918 683 FunFam cysteine-rich receptor-like protein kinase 10 432 634 - -
Seca7g07918 683 MobiDBLite consensus disorder prediction 638 683 - -
Seca7g07918 683 Pfam Protein tyrosine and serine/threonine kinase 360 625 IPR001245 GO:0004672|GO:0006468
Seca7g07918 683 ProSiteProfiles Gnk2-homologous domain profile. 44 147 IPR002902 -
Seca7g07918 683 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 679 - -
Seca7g07918 683 SUPERFAMILY Protein kinase-like (PK-like) 340 645 IPR011009 -
Seca7g07918 683 Gene3D Transferase(Phosphotransferase) domain 1 432 639 - -
Seca7g07918 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Seca7g07918 683 Gene3D - 155 256 IPR038408 -
Seca7g07918 683 Gene3D - 42 147 IPR038408 -
Seca7g07918 683 FunFam Cysteine-rich receptor-like protein kinase 25 155 256 - -
Seca7g07918 683 MobiDBLite consensus disorder prediction 644 683 - -
Seca7g07918 683 ProSiteProfiles Gnk2-homologous domain profile. 153 256 IPR002902 -
Seca7g07918 683 FunFam Cysteine-rich receptor-like protein kinase 10 319 431 - -
Seca7g07918 683 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07918 Seca-Chr7 183629252 183632672 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07918 26 683 Receptor kinase-like Gene Family AT4G05200 50.222 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca7g07918 PK_Tyr_Ser-Thr 6.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07918 - - qsu:112026294 738.028