Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07879 ATGCCGGTCGACTTCGCCTCCATCTTCGCCTCCCAGCGCTTCTTCTTCTCCTCCCCTGGCACCTCCAATTCCATCATAGAATCCCCTGACACTCGCCCTCGCCCCTGCAACACCAACACGCTCATACCATTACCAAAAGGAGGTGTTAGGGTCCCCAAATACTCTCTCAATCCCTACGTTGATTTCCTCCATTCAATGCAGGAAATGATCCATTCCCGGCATCAAGTGGAAAATGACTGGGATTATCTTCACGAGCTTCTCTTATGTTATCTTGCTCTCAATCCCACACACACTCACAAGCACATTGTTCGTGCTTTCACTCATCTTGTTGTGGACCTCTTGTCATCCTCTTCTTCGTCCTCATCATCGCCATCATCGGAGATCAAATTAACCACCCCTTGCCGCATGCATAACAATCAACGGCAGAGTAGTTTCTCAGGGAGGTTGGTGTAA 453 0.4923 MPVDFASIFASQRFFFSSPGTSNSIIESPDTRPRPCNTNTLIPLPKGGVRVPKYSLNPYVDFLHSMQEMIHSRHQVENDWDYLHELLLCYLALNPTHTHKHIVRAFTHLVVDLLSSSSSSSSSPSSEIKLTTPCRMHNNQRQSSFSGRLV. 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07879 150 Pfam Transcriptional repressor, ovate 55 113 IPR006458 -
Seca7g07879 150 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 8 116 IPR038933 GO:0045892
Seca7g07879 150 MobiDBLite consensus disorder prediction 116 150 - -
Seca7g07879 150 ProSiteProfiles OVATE domain profile. 51 112 IPR006458 -
Seca7g07879 150 NCBIfam uncharacterized plant-specific domain TIGR01568 51 114 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07879 Seca-Chr7 183177692 183178144 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca7g07879 Ovate 3.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07879 - - lja:Lj1g3v0095190.1 167.933