Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07855 ATGTTCTCTTCCACTTATCATGACTCCAACCTTTTCCCTAACTTCCCTTCATCTTCTTACCCTCCTTTTTTTATTGATCCTCAAAATGATTTTGCTAATAACACCCTCCTTATTGATGATCCACTTCTTGTTCCTCCTCCAATACTATTCCCACAAGAAACTGTTGCCAATTTGTCACTTGCAGATTGCACTGCTATCCTTGAACAAGATGGATGCTATGGTGGTACTGATAGCATTAGCAGCATTCCTAATTTCCTCACTCAGAAACCAGCCATAGCCAAGAAAGACAGGCACAGTAAGATTCACACATCTCAGGGTTTGAGAGACCGAAGGGTGAGATTGTCCAGTGAAATAGCCCGCAAGTTCTTTGATCTTCAGGACATGTTGGAGTTTGACAAACCAAGTAACACCCTTGAGTGGCTCTTCACAAAGTCAGAGAATGCAATCAAGGAACTTGCTAGAAGCAAGCATAATAGCAGAGAAGGTGAAAAGTGTTCCTGTGACCCTTCTTCTTCAAATAACAAATCATTGAGTGGTTCTAATAAAGGAGGGAGGAAGTTGAAATGCACACAGGGGGAAGATGTTTGTGTTCAGACAAAAAAAGAGTCAAGAGAAAGAGCAAGAGCAAGAGCAAGAGAAAGGACTTGTTACAAGATGTGTAACAATGGGAGGGTGCAAGAGTTTGAAGAAATTATTAGATGCCCTGTAACTGCAAATGCAAGGCCAACTATTCAGAGTACTCAACCTGAGCCATGTGCAAGATGGCATCAACTAGTTCAACTTCAACCCTACCCTCATCCACTACTAGATACTACTGCAGAACCACCCTCCATAGATGGATTTAACATCATTGAGGAATCTATTGTGATAAAAAGGAACATGATGTCTTCTTCTTCTTCCTCCTCTACTTCTTCTCATCACCACCAAAACCTTGTGATCCCTAAGGAACCAAGTTTCAACAACAATAATGACTACCCCTTATTCCCCTATTCCACCACTACTCCAAATTGGGATACCAATGGACACTCCAACTTTTGTGGAATAGCCACCATGAACATGAATCTCTCTACATGTTTCATGAACCAGTGA 1089 0.4141 MFSSTYHDSNLFPNFPSSSYPPFFIDPQNDFANNTLLIDDPLLVPPPILFPQETVANLSLADCTAILEQDGCYGGTDSISSIPNFLTQKPAIAKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSENAIKELARSKHNSREGEKCSCDPSSSNNKSLSGSNKGGRKLKCTQGEDVCVQTKKESRERARARARERTCYKMCNNGRVQEFEEIIRCPVTANARPTIQSTQPEPCARWHQLVQLQPYPHPLLDTTAEPPSIDGFNIIEESIVIKRNMMSSSSSSSTSSHHHQNLVIPKEPSFNNNNDYPLFPYSTTTPNWDTNGHSNFCGIATMNMNLSTCFMNQ. 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07855 362 ProSiteProfiles TCP domain profile. 94 152 IPR017887 -
Seca7g07855 362 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 92 321 IPR005333 GO:0003700
Seca7g07855 362 MobiDBLite consensus disorder prediction 295 318 - -
Seca7g07855 362 ProSiteProfiles R domain profile. 201 218 IPR017888 -
Seca7g07855 362 MobiDBLite consensus disorder prediction 165 185 - -
Seca7g07855 362 MobiDBLite consensus disorder prediction 160 187 - -
Seca7g07855 362 Pfam TCP family transcription factor 93 221 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07855 Seca-Chr7 182919798 182921375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07855 92 220 TCP Transcription Factor Family AT1G67260 41.722 1.43e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Seca7g07855 TCP 1.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07855 - - aprc:113871835 372.089