Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07848 ATGCATTCGGAAGGTGGGGGTGTTAGTACCACAAAGACGGAACCTGAAGCTGCTACTTTGAATTCAAAAATGAAAGGCAGTGGAAATCAAAGCAGCAAAAGTATGGTTCTCAGAGCTGACAAAATTGATCTCAAGAGTCTGGATGCTGCGCTTGAAAAGCACTTGACCAGGGTCTTTTCCAAAAGCATTGAGGCAAAAAGGCCTAAAGAAGAATGGGAGATTGATCTGTCCATGTTGAATTTACGATATGTTATTGCTAAAGGGGCCTATGGTACTGTCTACAGGGGCACTCTTGATACCCAAGATGTTGCAGTGAAAGTGTTGGACTGGGGTGAGGATGGTGTTACAAGTGCTGAGGAAACCGCTGCTTTACGAGCAGCATTTCGCCAGGAGGTTACTGTTTGGCATAAAGTTGATCATCCAAACGTCACAAAATTCATTGGAGCTTCGATGGGCACTTCAAATCTTAAGATATCTTTACGAGCTGGTGGTCAAGATTCAATTCCTTCCATGTCATGTTGTGTCATTGTTGAGTTTCTTCCTGGTGGGACGCTGAAACAATACTTGTTTAAGAATAGGCGAAAGAAACTTGCCTATAAGGCTGTGATTCAGCTGGCTTTGGACCTCGCTAGAGGTCTTAGTTATCTACATTCGATGAAAATTGTTCATCGCGATGTGAAAAGTGATAACATGTTGTTAGATGCTAATCATAAATTGAAAATAGCTGATTTCGGAGTTGCTCGGATTGAAGCTCAAAATCCTAGTGAAATGACAGGGGAAACTGGAACCATTGGATATATGGCACCAGAGGTTCTGAATGGCAAGCCTTACAACAGAAAATGTGATGTCTATAGCTTTGGCATTTGCTTGTGGGAAATTTATTGCTGTGACATGCCTTATCCAAATCTAAGCTTTGTGGATGTGTCCTCTGCCGTTGTTCGTCAGAATTTACGACCAGATATTCCAAGATGTTGCCCAAGTGCCTTAGCAAATATAATGAGAAAGTGCTGGGATAAAAAAGCAGAGAAGCGTCCAGAAATGCATGAGGTGGTGAGAATGTTGGAAGCAATTGATACTAGCAAAGGAGGTGGAATGATACCAGAAGACAAGACTCCATTTTGTTTTTGTTTCATACCGACTCGTGGTCCATAA 1152 0.421 MHSEGGGVSTTKTEPEAATLNSKMKGSGNQSSKSMVLRADKIDLKSLDAALEKHLTRVFSKSIEAKRPKEEWEIDLSMLNLRYVIAKGAYGTVYRGTLDTQDVAVKVLDWGEDGVTSAEETAALRAAFRQEVTVWHKVDHPNVTKFIGASMGTSNLKISLRAGGQDSIPSMSCCVIVEFLPGGTLKQYLFKNRRKKLAYKAVIQLALDLARGLSYLHSMKIVHRDVKSDNMLLDANHKLKIADFGVARIEAQNPSEMTGETGTIGYMAPEVLNGKPYNRKCDVYSFGICLWEIYCCDMPYPNLSFVDVSSAVVRQNLRPDIPRCCPSALANIMRKCWDKKAEKRPEMHEVVRMLEAIDTSKGGGMIPEDKTPFCFCFIPTRGP. 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07848 383 MobiDBLite consensus disorder prediction 1 33 - -
Seca7g07848 383 Gene3D Phosphorylase Kinase; domain 1 68 161 - -
Seca7g07848 383 CDD STKc_MAP3K-like 85 354 - -
Seca7g07848 383 SMART serkin_6 79 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07848 383 Gene3D Transferase(Phosphotransferase) domain 1 182 365 - -
Seca7g07848 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Seca7g07848 383 PRINTS Tyrosine kinase catalytic domain signature 177 190 IPR001245 GO:0004672|GO:0006468
Seca7g07848 383 PRINTS Tyrosine kinase catalytic domain signature 281 303 IPR001245 GO:0004672|GO:0006468
Seca7g07848 383 PRINTS Tyrosine kinase catalytic domain signature 215 233 IPR001245 GO:0004672|GO:0006468
Seca7g07848 383 PRINTS Tyrosine kinase catalytic domain signature 325 347 IPR001245 GO:0004672|GO:0006468
Seca7g07848 383 Pfam Protein tyrosine and serine/threonine kinase 80 354 IPR001245 GO:0004672|GO:0006468
Seca7g07848 383 ProSiteProfiles Protein kinase domain profile. 79 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07848 383 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 38 357 - -
Seca7g07848 383 FunFam Kinase suppressor of Ras 1 68 162 - -
Seca7g07848 383 FunFam Serine/threonine-protein kinase HT1 180 365 - -
Seca7g07848 383 SUPERFAMILY Protein kinase-like (PK-like) 65 354 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07848 Seca-Chr7 182836201 182839775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07848 9 383 MAP Kinase Kinase Kinase AT3G22750 71.618 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Seca7g07848 PK_Tyr_Ser-Thr 6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07848 - - gmx:100803917 627.476