Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07839 ATGGGGAAGACGGGCAAATGGCTTAGAAACTTCTTGACAGGGAAGAAAGACAAGGAAAAATCTCCAAACAACCTGAATTTTTCAAATGGAACAGAAAATCCAACTACTCCAAATTCAACAACCCCAAAGGAGAAAAAGAGATGGAGTTTTCGAAGATCATCAGCCACAGCCACACCAACAGCTTCCAAGGAATTGAATTTTGGAGAATCAAATGGAACTGCTTCACAGACAGTGCAAACTGCCACTGATATTCAAAATGAGCAGAGGAAGCATGCCATGGCTGTGGCTGCTGCCACAGCAGCAGCAGCTGATGCAGCAGTGGCAGCTGCACAGGCTGCAGCTGCTGTGATCCGCTTGACTTCTGGTTCCAATGAAACATCTGAAAGTATTGAAGAGGCTGCTGCCATTAAAATCCAATCTGTCTTTCGGTCTCACTTGGCAAGAAAAGCATTGTGTGCTCTAAGAGGATTAGTGAAGTTGCAGGCACTAGTAAGGGGTCACCTTGTGAGAAAACAGGCCAAGGAAACACTGAGATGCATGCAGGCTTTGGTGACAGCACAAGCCAGAGCTCGTGCTCAGAGGATCCGAATGGGGTCAGAAGGAAAGTCTAGTCAAAACAACTTAACTCACGGATATGCTACAGAGAACGATTTATTCAAGCACATATATAATGAAATGGACAGAGGCTTGGAAGACAACATCAAGATTGTGGAGATGGATGTTTGTGAATCAAAAGGCAACTCTAGAAGCAGAAGCAGCAGTACATATCATCATGTACATCAGGAACAGTCTGAACATAGATTTTCCACACATTATTCAACAAATGGTTCGCACTCAAAGGAAGAAAACTACAACAAAGTATCACCAGCTCCATCAGCTTTGACAGAGTTGAGTCCAAAAGCCTGTAGTGGCCATTTTGAGGACTGCTTCAGTACAGCACAGAGCAGCCCTCATTACTACTCTGCTGTGTCTAGAGCAGACGATTCAAAGCATCCTTTTGCTTTCCCTAGGCCAGTTTATGCAGAATCTATGTCCTATGACTACCCTTTATTCCCAAATTACATGGCTAACACAGAATCATCAAGGGCCAAAGTCAGATCACATAGTGCACCAAAACAAAGACCAGATTCATTTGAGAGGCAACCCAGCAGGCGAAGAGTTTCAGTGGAAGGAAGAAATGTCCCAAGGCCAGTGAGGATGCAGAGGTCATCTTCACATGTGGGTGCCACTGCCCATAACTACCAATATCCATGGTCAATCAAACTTGACAGATCCACAGTTTCACTCAAAGACAGTGAGTGTGGTTCTACAAGTACAGTGCTCACAAACACTAATTACTGCAGATCTCTTGTTGCATATGACCCAAATGGAGATAGGTACTGA 1383 0.4432 MGKTGKWLRNFLTGKKDKEKSPNNLNFSNGTENPTTPNSTTPKEKKRWSFRRSSATATPTASKELNFGESNGTASQTVQTATDIQNEQRKHAMAVAAATAAAADAAVAAAQAAAAVIRLTSGSNETSESIEEAAAIKIQSVFRSHLARKALCALRGLVKLQALVRGHLVRKQAKETLRCMQALVTAQARARAQRIRMGSEGKSSQNNLTHGYATENDLFKHIYNEMDRGLEDNIKIVEMDVCESKGNSRSRSSSTYHHVHQEQSEHRFSTHYSTNGSHSKEENYNKVSPAPSALTELSPKACSGHFEDCFSTAQSSPHYYSAVSRADDSKHPFAFPRPVYAESMSYDYPLFPNYMANTESSRAKVRSHSAPKQRPDSFERQPSRRRVSVEGRNVPRPVRMQRSSSHVGATAHNYQYPWSIKLDRSTVSLKDSECGSTSTVLTNTNYCRSLVAYDPNGDRY. 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07839 460 Pfam IQ calmodulin-binding motif 133 151 IPR000048 GO:0005515
Seca7g07839 460 Pfam IQ calmodulin-binding motif 158 174 IPR000048 GO:0005515
Seca7g07839 460 MobiDBLite consensus disorder prediction 1 74 - -
Seca7g07839 460 ProSiteProfiles IQ motif profile. 155 182 IPR000048 GO:0005515
Seca7g07839 460 MobiDBLite consensus disorder prediction 362 407 - -
Seca7g07839 460 SMART iq_5 153 174 IPR000048 GO:0005515
Seca7g07839 460 SMART iq_5 130 152 IPR000048 GO:0005515
Seca7g07839 460 Pfam Protein of unknown function (DUF4005) 332 391 IPR025064 -
Seca7g07839 460 MobiDBLite consensus disorder prediction 23 43 - -
Seca7g07839 460 MobiDBLite consensus disorder prediction 365 392 - -
Seca7g07839 460 MobiDBLite consensus disorder prediction 247 292 - -
Seca7g07839 460 MobiDBLite consensus disorder prediction 52 74 - -
Seca7g07839 460 ProSiteProfiles IQ motif profile. 131 159 IPR000048 GO:0005515
Seca7g07839 460 MobiDBLite consensus disorder prediction 268 292 - -
Seca7g07839 460 PANTHER IQ-DOMAIN 5-RELATED 1 390 - -
Seca7g07839 460 Gene3D - 130 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07839 Seca-Chr7 182726750 182730970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07839 1 448 IQD Protein Family AT4G14750 45.474 2.82e-103 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07839 - - gmx:100817667 683.715