Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07837 ATGGCTGGTAGACTACCTGGTGTTGGGTTACCACCCAGGAAGAGATCAGAACACCACCATAATAATAGATTCCGAGACTCCTACCTAAGGGATAATTCATTGGACTCACCATGGATTTCAGTAAGTGCCTTAGATGAAACTGCTCTCAAGGCCAGACAACGCCTCCAGAAGAAGCTTGGTCACTTCTTTTCTTATTCCAGGTCAAGTGAGAGCAGCAATCCGAAAAAAGAAGGAAAAGTGAGTGAAATTAACAGGTTGGAGAAGAAGAAGGAATCGGGGTTAGGTAGGAAGATACTAGAAAGTTCATGGTTATTGCGTGGGAACAAGTTTAAGAAAGAGAGAAAAGTTTGTGCTGTTTGCCTAGAATATTTCGAGGAAGACCAAGAGGTTATGAACCTTTCTTGCTCCCACAAGTACCATTCAGCATGTCTTCTCCCCTGGCTTGCAGCTCATCCCCATTGTCCCTGTTGTCGAACCTTAGTCCACTGTTGA 492 0.4431 MAGRLPGVGLPPRKRSEHHHNNRFRDSYLRDNSLDSPWISVSALDETALKARQRLQKKLGHFFSYSRSSESSNPKKEGKVSEINRLEKKKESGLGRKILESSWLLRGNKFKKERKVCAVCLEYFEEDQEVMNLSCSHKYHSACLLPWLAAHPHCPCCRTLVHC. 164
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07837 163 CDD RING-H2_PA-TM-RING 116 158 - -
Seca7g07837 163 MobiDBLite consensus disorder prediction 65 84 - -
Seca7g07837 163 ProSiteProfiles Zinc finger RING-type profile. 117 158 IPR001841 -
Seca7g07837 163 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 49 159 - -
Seca7g07837 163 SUPERFAMILY RING/U-box 116 161 - -
Seca7g07837 163 SMART ring_2 117 157 IPR001841 -
Seca7g07837 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 162 IPR013083 -
Seca7g07837 163 Pfam Ring finger domain 116 158 IPR001841 -
Seca7g07837 163 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca7g07837 Seca-Chr7 182711290 182717980 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07837 109 161 C3H Transcription Factor Family AT1G49850 43.396 9.37e-12 59.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07837 - - gmx:100527548 221.476