Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07832 ATGAACGGCGGCGGCACCGCCACCTTCCGATCCATCCTCGACAAACCCCTCAACCAGCTCACCGAAGATGACATTTCCCAGCTCACCCGCGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGCAGGCCTTCGTGGAACAAATCGCAGGCGATCCAGCAGGTCATTTCCCTCAAAGCCCTTCTCGAACCCGCCGACGATGATTCCTCCGCCCCCATCTCCTCCGCCACTCACCACCACCCTCCTACTCCTCAACCTCAAGTCAGTCACTCTCTCTCTCTCTCTGTTCCGGCTGCTGATGAGCCTGGTCTTCATGCTGCCGATGAGCTTCAGAAATCTGCCTCCTCTGCGGAAAAACCTACGGAAACGAATGATACTAACGTTGTTAGCCCCAGAGGGTGTGCAACTAGTGGGTCATTTGGGCAAATGACAATTTTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCTCCCCTGATAAGGCACAATCAATCATGCAGCTTGCAGCAAGTCCAGTCCAATTTCCTCAGGATGAACCTTTAAATAAAAATGCAGCAGTTTGGGCTTCTCCTTGCACCTTACCAATGGATAAGGATGTCCTCTTACCCATTGATACAGCAGTCCTTCAGGTTGCTCAAACAGATAAGATGGTGGATTATCCTCTGCAATACAGGGAGAAAGGGAGCATAGCTCGTGATACTGATGTAGAGGGTCAGGCAAGCAGAAAAGTGTCATTGCAGCGGTACCTTGAAAAGCGAAAAGACAGGGGGAGATTGAAGGGCAAGAAATTGACTGGCATAACTTCATCTAACTTCGAGATGTATTTGAACCTTCCAGTGAAGGTCCATGCCTCAAATGGGAATTCAAGCCGTAGTAGCACTAGCTCTCCACCACAGCCTAGGCTGCCTCTAGTTTCCAGTGGCTCAGCTGACAACCAGCTAAAAGTTGGCCTTCCAATTGATCTCAATGACAAAGGTCAGTCACTATCTATGTTCAAGAATGCTAAAACCCAGACTAGATAG 1026 0.4932 MNGGGTATFRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPADDDSSAPISSATHHHPPTPQPQVSHSLSLSVPAADEPGLHAADELQKSASSAEKPTETNDTNVVSPRGCATSGSFGQMTIFYCGKVNVYDGVSPDKAQSIMQLAASPVQFPQDEPLNKNAAVWASPCTLPMDKDVLLPIDTAVLQVAQTDKMVDYPLQYREKGSIARDTDVEGQASRKVSLQRYLEKRKDRGRLKGKKLTGITSSNFEMYLNLPVKVHASNGNSSRSSTSSPPQPRLPLVSSGSADNQLKVGLPIDLNDKGQSLSMFKNAKTQTR. 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07832 341 MobiDBLite consensus disorder prediction 110 134 - -
Seca7g07832 341 Pfam Jas motif 240 257 IPR018467 -
Seca7g07832 341 MobiDBLite consensus disorder prediction 67 93 - -
Seca7g07832 341 Pfam tify domain 143 171 IPR010399 -
Seca7g07832 341 ProSiteProfiles Tify domain profile. 137 172 IPR010399 -
Seca7g07832 341 SMART tify_2 137 172 IPR010399 -
Seca7g07832 341 MobiDBLite consensus disorder prediction 284 341 - -
Seca7g07832 341 MobiDBLite consensus disorder prediction 284 314 - -
Seca7g07832 341 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 10 274 IPR040390 -
Seca7g07832 341 MobiDBLite consensus disorder prediction 115 134 - -
Seca7g07832 341 MobiDBLite consensus disorder prediction 71 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07832 Seca-Chr7 182613228 182618641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07832 5 286 Tify Gene Family AT4G14720 47.333 4.74e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Seca7g07832 tify 6.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07832 - - gmx:100808970 503.056