Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07821 ATGGAGGAAGAGAGTCACTGCTTCGAGTGCCTCCAACTTCGAATCAACTCGGATTTCTCTGATCAACTCGTCTTCCATTATGCCATCTCCACTTCTGCTTTTCCTTTCGGATCCTCAGCTATCGTCCATATTTCTTGTACAGCAGGCGGTGAAGCTTTAGGCGGTCAATTTATATTACAGTACATGCCCAGTCATAAGAAGAATTGCTTTACCAATTATGTAAGTGAATATATTGTGGATAGTAGTGAAAGCACTAGGAGTAATGATCCTGATGTTGGAGGCAGTCAATATAATGATGTGGTTAATGGTGGAATGACTTCATCTGATGATTCTGAAACTAGAAAAGCTTCTTCAAGAAACAGAACATGTGATCATTCTGGAAGGTTTTCTTGTTCGAGGACAATCAGTTCACTGGCACCTATTGCTCGTGTCGAAATGTCCTCCTATTCTACATTTCAAGAGGTCGCCACTGATTTCTTGTCTGGGTTATCAGAAGATCATGTGTTAGATTCACTTGATCTCTTCATTGAAGGGAAAGCATCTGGACGGGACAGTATAAATTTCCTTAGTTTACTTGGGTTGCCATCATTTGAGGAAGATACTTTTCCAGGCTCTTTGAGGCATCCAAACATAGCTCCTGTGCTTGCAGTTTTAAAAACATCTGATCACATTAACATAGTGCTTCCAAAGACTCCATACAACTTGGAAAGTATTCTTCATTTTAACCCCAATGCCTTAAAGTCTGATTGGAATAGAAGATTTCTTATATATCAGCTACTCTCAGCCTTAGTGTACTTACATGGTTTAGGGGTTTGCCATGGTAATATATGCCCATCCAATATCATGTTGACTGATTCATTATGGTCTTGGCTGAGATTATGGAATGAACCTGTATTGGAATCTAATTTAACTTTGCAAAAGAGTGAAAACATTAATTCTAAACCTGTAAAACTTGGTTGCTGTAATGGTAGCTGTCATTCTAATGGCCTTTATGCTGACCTAAAGCTTTCTCCATCAATAGATTGGCATTCTAGTTTTCATCAGTGGTGGAGAGGAGAGCTAAGCAATTTTGAGTATTTACTCATCTTAAACAGATTAGCAGGAAGAAGGTGGGGTGACCATACATTTCATCCAGTAATGCCTTGGGTAATTGATTTTAGCTCAAAGCCTGATGACAATTGTGATGCAGGGTGGCGAGACTTAACCAAAAGCAAATGGCGTTTGGCAAAAGGTGATGAACAGTTGGATTTCACCTATTCAACGTCTGAAATCCCTCATCACGTATCAGATGAATGTCTGTCAGAATTGGCTGTCTGCAGTTATAAAGCAAGAAGGCTGCCTTTAAGTGTTCTCCGAATGGCTGTTCGTTCAGTGTATGAACCTAATGAATATCCTTCCACAATGCAAAGGCTCTATCAATGGACCCCTGATGAATGCATTCCAGAGTTTTACTGTGATGCCCAAATTTTTAGGTCAATACATGATGGTATGGCTGATTTGGCTGTGCCTTCTTGGGCAGAGAGTCCCAAGGATTTCATTAAATTGCATCGTGACGCATTAGAAAGTAATAGGGTGTCATTTCAACTCCATCATTGGATAGATATAACCTTTGGGTACAAAATGTCTGGCCAGGCAGCTATTACTGCTAAGAATGTTATGCTTCCTCTATCAGAACCCACAATGCCAAGATCAGCAGGACGTCGTCAGCTCTTTACACAACCACACCCCATTCGTCATGCCACTACCAGAATAACACGTCATGGTTCCAATAAATATGCCAAAGTTTGGAGCCAAACAAATGAAATGCAGCGAGAGACATCTCTTCTATCTGAAACTGCTTATCTACAAGAACTAGAACAAGCATCTGCATTTTCCGAACATGCTAGGTATTTGAATGCCTGTTACCATTACCCACTAAATCAAATGAAAAGGAAACACATCTCATCTTTGGGAGACCCACCAACAGAAGGATTTAGTGAAAATATAAACAAACTATCTTTGATTGACAGAAATTATTGGTTGCCATATAAAATGAATTTAATCTCTTTTCTTCAACATATGGAAGAGGAAGATGAAGGCTCCTCAGGATATCCAGACTTGCTGCTTTGGAGGCAGAAATTATCTTCTTCAAGACTTGCCTCTGAAGGTGTTGCTAGTGACATATTTTCTGTTGGCTGTCTCTTAGCAGAACTTCATCTTTGCAGGCCACTCTTTGATTCAATCTCATTGGCAATATACTTCGAGGATGGAACCTTACCAGGATCTCTGCAGGAACTACCTCCTCATGTTAGACTACTTGTTGAAGCATGCATCCAAAAGGATTGGACGAGGAGGCCATCAGCTAAAAGTCTTCTGGAATCACCTTATTTTCCAAAGACAGTCAAGTCCTCCTACTTGTTTCTTGCTCCACTTCAGCTTGTAGCTAAAGATGAAACTCGACTTCGTTATGCTGCAAATCTTGCAAAGCAGGGAGCTCTCAGGGAAATGGGTGCATTTGCAACTGAAATGTGTGCTGCTTATTGTTTACCATTTATAGTGAATACTGTGAATGATACTGAATCTGAATGGGCATATGTACTACTGAAGGAATTGATGAAATGCTTAACAGAACAAGCAGTGAAAACATTAATATTGCCAACCATACAGAAAATTTTACAGACCACAGGTTATTTACATTTAAAGGTTTCCCTTTTACAAGATTCATTTGTACGTGAAATATGGAATCGAGTTGGTAAACAAACATACCTGGAAACTATTCACCCATTGGTCTTGTCGAACTTGTATATTTCTCCAGATAAAAGTTCAGCTGCCTCTGCTTCAGTTCTTCTAATCGGTTCTAGTGAGGAGATTGGTGTACCTATTACCATCCATCAGACTATCTTGCCTCTTGTTCACTGCTTTGGGAAAGGACTGTGTGCAGATGGCATTGATGTCCTGGTCAGAATTGGAGGTGTTTTTGGGGAATCCTTTATCGTCAAACAGATGCTACCATTACTGAAAAATGTTGTTCGCTCCTTCATTGATATGTCATGCATGAATAAGCCTGATCCTGTTCAGAGTTGGAGTGCTTTAGCACTTATTGATTGTATGATGACTTTAGATGGCCTTATAGCTTTCTTGACAGAAGAGATCATCGTAAAGGAGCTACTTGAAGACCTAAGTTGCATGCTCATTGGGGTTCTTATGCAGAAACATATGGAAATTGCAGTGCTTCAGGTTGCTGCTACTAATCTCTTTGGAATTTGTCAGCGGATTGGGGCAGATTTGACGGCATTGCATATTCTTCCTAAACTTAGAGAACTATTTGATGAGCTTGCTTTCTCCCAGGACATTTCCAAAGGTTCGACTACTGTTGGCAGAAACTTGAAGGTTACCAAATTAAAAGTTGGAGGGGACTTGCAAATTGAAAGTCGTATGGATCTAGTGTTGCTTCTCTATCCTTCCTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACATGGTTGCTTCTCGAACAATTTCTTCTACGTTGTCATAATTGGAAGTGGGAATATGCAGGAGAATCATCAAAAAGTGGCTCAGAAAATATTTTTGCCAGAAGACCTACAATTGCCCAGGGATTCACATCTGAGCACAATCCAGCAAAACTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCCCAAGGAAGTAGAAGTGCCAAAAATTTGATTCCTCAGAGACGGTCATTTAAAGTTCAGCAAAGCCCTGTAGTAATGCATGAAGGAATGTCATACCAAATGAACCATGAACCCTGGTTTTGGTTCCCTAGTCCAGCCACCATCTGGGATGGGCCGGAATTTCTTGGGCGGGTGGGGGTTCAGAAAGATGACCTTCCATGGAAGATCAGAGCATCTGTAATCTACTCTATACGTGCACATCATGGAACAGTGAGGTCTCTGGCTGTTGATCAGGATGAATGTATTGTTTTCACTGCAGGAATTGGCCAAGGATATAAAGGAACTGTTCAAAAGTGGGAATTGAGCCGAACTAACTGTCTGTCTGGCTATTATGGCCATGATGAGGTGGTGAATGATATTTGCATCTTATCATCTAGTGGAAGAGTAGCATCTTGTGATGGAACGATTCACATTTGGAATAGTCAAACAGGGAAGCAAATATCAGTATTTGCGGAATCCCAAACAGAATCTGGCCATCCTGCAAGCCATCCACCCTCTGCGTTAAAAATTAACAGTGACCAAGCAAATGTCCTTAATTTGAATACGCTATCAAATGGAATATTGTCTAGTGCTTTTGATTCAAGCCTTTATACTTGTATGCATCTATTAGACTCTGCTGAAACTCTTGTAGTTGGCACTGGAAATGGTTCTCTCAGGTGA 4374 0.4053 MEEESHCFECLQLRINSDFSDQLVFHYAISTSAFPFGSSAIVHISCTAGGEALGGQFILQYMPSHKKNCFTNYVSEYIVDSSESTRSNDPDVGGSQYNDVVNGGMTSSDDSETRKASSRNRTCDHSGRFSCSRTISSLAPIARVEMSSYSTFQEVATDFLSGLSEDHVLDSLDLFIEGKASGRDSINFLSLLGLPSFEEDTFPGSLRHPNIAPVLAVLKTSDHINIVLPKTPYNLESILHFNPNALKSDWNRRFLIYQLLSALVYLHGLGVCHGNICPSNIMLTDSLWSWLRLWNEPVLESNLTLQKSENINSKPVKLGCCNGSCHSNGLYADLKLSPSIDWHSSFHQWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDNCDAGWRDLTKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDAQIFRSIHDGMADLAVPSWAESPKDFIKLHRDALESNRVSFQLHHWIDITFGYKMSGQAAITAKNVMLPLSEPTMPRSAGRRQLFTQPHPIRHATTRITRHGSNKYAKVWSQTNEMQRETSLLSETAYLQELEQASAFSEHARYLNACYHYPLNQMKRKHISSLGDPPTEGFSENINKLSLIDRNYWLPYKMNLISFLQHMEEEDEGSSGYPDLLLWRQKLSSSRLASEGVASDIFSVGCLLAELHLCRPLFDSISLAIYFEDGTLPGSLQELPPHVRLLVEACIQKDWTRRPSAKSLLESPYFPKTVKSSYLFLAPLQLVAKDETRLRYAANLAKQGALREMGAFATEMCAAYCLPFIVNTVNDTESEWAYVLLKELMKCLTEQAVKTLILPTIQKILQTTGYLHLKVSLLQDSFVREIWNRVGKQTYLETIHPLVLSNLYISPDKSSAASASVLLIGSSEEIGVPITIHQTILPLVHCFGKGLCADGIDVLVRIGGVFGESFIVKQMLPLLKNVVRSFIDMSCMNKPDPVQSWSALALIDCMMTLDGLIAFLTEEIIVKELLEDLSCMLIGVLMQKHMEIAVLQVAATNLFGICQRIGADLTALHILPKLRELFDELAFSQDISKGSTTVGRNLKVTKLKVGGDLQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRCHNWKWEYAGESSKSGSENIFARRPTIAQGFTSEHNPAKLLLNGVGWSIPQSQGSRSAKNLIPQRRSFKVQQSPVVMHEGMSYQMNHEPWFWFPSPATIWDGPEFLGRVGVQKDDLPWKIRASVIYSIRAHHGTVRSLAVDQDECIVFTAGIGQGYKGTVQKWELSRTNCLSGYYGHDEVVNDICILSSSGRVASCDGTIHIWNSQTGKQISVFAESQTESGHPASHPPSALKINSDQANVLNLNTLSNGILSSAFDSSLYTCMHLLDSAETLVVGTGNGSLR. 1458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07821 1457 ProSiteProfiles BEACH domain profile. 334 604 IPR000409 -
Seca7g07821 1457 Pfam Protein kinase domain 204 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07821 1457 Pfam Beige/BEACH domain 348 559 IPR000409 -
Seca7g07821 1457 SMART Beach_2 346 578 IPR000409 -
Seca7g07821 1457 MobiDBLite consensus disorder prediction 83 125 - -
Seca7g07821 1457 CDD Beach 348 578 IPR000409 -
Seca7g07821 1457 Gene3D BEACH domain 339 588 IPR036372 -
Seca7g07821 1457 SUPERFAMILY WD40 repeat-like 1295 1397 IPR036322 GO:0005515
Seca7g07821 1457 SUPERFAMILY Protein kinase-like (PK-like) 716 809 IPR011009 -
Seca7g07821 1457 PANTHER GH12955P 4 1457 - -
Seca7g07821 1457 SUPERFAMILY BEACH domain 336 578 IPR036372 -
Seca7g07821 1457 Gene3D - 1287 1457 IPR015943 GO:0005515
Seca7g07821 1457 SMART WD40_4 1295 1338 IPR001680 GO:0005515
Seca7g07821 1457 SMART WD40_4 1341 1378 IPR001680 GO:0005515
Seca7g07821 1457 Gene3D Transferase(Phosphotransferase) domain 1 199 326 - -
Seca7g07821 1457 SUPERFAMILY Protein kinase-like (PK-like) 205 288 IPR011009 -
Seca7g07821 1457 Gene3D Transferase(Phosphotransferase) domain 1 699 798 - -
Seca7g07821 1457 SMART serkin_6 135 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07821 1457 MobiDBLite consensus disorder prediction 83 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07821 Seca-Chr7 182503115 182513416 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AurL-Cr-1 Seca7g07821 Beach 8.3e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07821 K17601 - gmx:100809116 2583.13