Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07816 ATGTGCTGTAATATGGAAGGAAATGATGGGGGTAGATGCAAAGACGATTGTAACAGTTCTTCTGTTGAAATGGATGTCTATGAAAGCAGTTTACAGGAAGATGATGAAACCCATTCTCATGGCCCTCATAATACTTCATCGAGCATATTAACGAGTTCGTCATCTAGCAGATGTTTTGCAGCCCGGAAGTCAGGTAAGCGGTGGAAGCGGCGGCACTATCTACAGCAGAAAGCTCGTCAAGAACGCTTGAACAACAGCAGGAAGTGGAAGGGTGTAGATCATGACCAGTTGTTGAGCAAGAAGGTTCACAGAATTTCTGAACCAGAAAATCTGGATAGTCTTGCTTCTGAAAATTGCAAAGAAACTGTACCAGACAATGGAAGCCTGGATGACAATAATGAAGAAGCAGTAAATGACAATTTAGTTGATAATGTCAACAATGATGAAGTAATTATTGAAAAGGAAGATTGCGGCACTGCTGAAAGTAAACATGAAAAAGATGCATCTTTATGCTCCTTAAAGAATGCGCAAAGTGAACCGGATGAAGCATCTTGTTCAGATTTTTTGAAATGTATTTCTAAATCAAAGAGGCATTCAGATCGGGATCTTGACAATCCTAAACCATGCAAATCTAGAAAACCAATTGGGGATGATATCTCATTACTGTCTTGCAAGTACAGTGAAATCTCATTTTGTGGCATTGAGGACCATCTATCAGATGGATTTTATGATGCAGGACGTGATCGGCCATTTATGCCTCTTGAGAGTTATGAGCAAAATCAGTGTCTTGCTTCTCGTGAAGTCATCCTGTTAGACAGAAGGAGAGATGAAGAGTTGGATGCTGTTGTGCTCTCTGCTCAGGCATTGATCTATAATTTGAAGCAGCTAAATGGTTTAAACATTCCTGGGAGCCAGGCTGTGGTTGATAACTTGCAGACAGCATCACTACTTGCACTCTTTGTATCCGATCATTTTGGTGGAAGTGATAGAGGTGCTATTATAGAAAGGACACGGAAATCTGTGTCTGGTTCAAACTATAATAAGCCTTTTGTCTGTACATGCTCGGCTGGAAGCAGCACCAGTACAAGTGCTTCCTCTGAAACAGTTGTAAACACCATAGAAGATATTGCTCTTTCTAAGATCTCTGAAAAATCTCTTAATTCTATCAAAAGAAGGCGAAATTCAATTGTAGTTCCAATTGGCTCTGTGCAGTATGGTGTATGTAGACATAGATCTCTTCTTTTTAAGTATTTATGTGATCACATGGAGCCACCTATACCTTGTGAGCTTGTTAGGGGTTACCTGGATTTTTCACCACATGCCTGGAATATCATTCTGATAAAGAGGGGTTCTACATGGGTTCGAATGCTTGTTGATGCTTGCCGACCTCATGATATAAGAGAAGAGAGAGATCCTGAATACTCCTGCAGGTACATACCCCTTAGTCGGCCCAAAATCCCTCCTCCATCTAGTAGTCATACTGGTCCTGATTATTCTTTTCCATCTCTCTCTACATGTGATGAACTTGAGAAAAAAGCTGTGACTACTTTAGTTCGTTGCAAATTTGGATCAGTTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGTGCAGGAGAGTTCGGCAGATAAAATTAAAAATTTTGAATATAATTGTTTGGGAGAAATTAGAATTCTTGGTGCTTTAAAACACCCCTGCATAGTGGAAATGTATGGACACCGAATATCATGTAAATGGACCATCTCAGCTGATGGTAAATCAGAGCATCGTGTATTAAGATCTGCCATTTTTATGGAATACGTTGAAGGTGGCTCCTTAAAAAGGTATCTAGAGAAGCTGTCAGGAGCTGGAGAAAAGCACGTTCCTGTGGAGTTGGCTTTGTATATTGCCAAAGATGTCTCATGTGCTTTGTTGGAGCTGCACTCGAAACATATAATTCATCGTGACATAAAAAGTGAAAACATTCTATGTGATTTTGATAGGAAGAGAGATGATGGAACTCCCATTGTGAAGCTATGTGATTTTGATAGTGCAGTGCCACTAAGATCACCCTTACATGTATGCTGTATCGCTCATGTGGGAACACCACCTCCTTGTGTGTGTGTTGGAACACCTCGATGGATGGCCCCAGAGGTCATGCGGACTATGTATGAAAAAAACACTTATGGACTGGAAGCTGATATTTGGTCGTTTGGATGTTTACTTTTGGAGATGCTGACGTTGCAAATTCCATATTTTGGAGTACCTGATTCACACATACATGATAGTCTGCAGATGGGTAAACGACCACAATTAAGTGATGAGCTGGAGACATTAAGTTCAATGAATGAACCCACAATGATTCATTCTGGGGAAGAGACGGAAAAATCTGATTCTGAAATAGGTACTTTGAAGTTCCTTGTTGATTTGTTTCATAGGTGTGTGGAAGAAAATCCAAATGAACGACCTACTGCTGAAGAAATCCATGAAATGCTGGTTGGACATACAAAGCACCGACAAGGTCAACAAGATGTTGGTAAGATTTAG 2523 0.4055 MCCNMEGNDGGRCKDDCNSSSVEMDVYESSLQEDDETHSHGPHNTSSSILTSSSSSRCFAARKSGKRWKRRHYLQQKARQERLNNSRKWKGVDHDQLLSKKVHRISEPENLDSLASENCKETVPDNGSLDDNNEEAVNDNLVDNVNNDEVIIEKEDCGTAESKHEKDASLCSLKNAQSEPDEASCSDFLKCISKSKRHSDRDLDNPKPCKSRKPIGDDISLLSCKYSEISFCGIEDHLSDGFYDAGRDRPFMPLESYEQNQCLASREVILLDRRRDEELDAVVLSAQALIYNLKQLNGLNIPGSQAVVDNLQTASLLALFVSDHFGGSDRGAIIERTRKSVSGSNYNKPFVCTCSAGSSTSTSASSETVVNTIEDIALSKISEKSLNSIKRRRNSIVVPIGSVQYGVCRHRSLLFKYLCDHMEPPIPCELVRGYLDFSPHAWNIILIKRGSTWVRMLVDACRPHDIREERDPEYSCRYIPLSRPKIPPPSSSHTGPDYSFPSLSTCDELEKKAVTTLVRCKFGSVEAAAKVRTLEVQESSADKIKNFEYNCLGEIRILGALKHPCIVEMYGHRISCKWTISADGKSEHRVLRSAIFMEYVEGGSLKRYLEKLSGAGEKHVPVELALYIAKDVSCALLELHSKHIIHRDIKSENILCDFDRKRDDGTPIVKLCDFDSAVPLRSPLHVCCIAHVGTPPPCVCVGTPRWMAPEVMRTMYEKNTYGLEADIWSFGCLLLEMLTLQIPYFGVPDSHIHDSLQMGKRPQLSDELETLSSMNEPTMIHSGEETEKSDSEIGTLKFLVDLFHRCVEENPNERPTAEEIHEMLVGHTKHRQGQQDVGKI. 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07816 840 ProSiteProfiles Protein kinase domain profile. 511 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07816 840 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 66 830 - -
Seca7g07816 840 MobiDBLite consensus disorder prediction 24 56 - -
Seca7g07816 840 Pfam Ethylene-responsive protein kinase Le-CTR1 378 459 - -
Seca7g07816 840 SMART serkin_6 507 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07816 840 Gene3D Phosphorylase Kinase; domain 1 511 606 - -
Seca7g07816 840 SUPERFAMILY Cysteine proteinases 404 462 IPR038765 -
Seca7g07816 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Seca7g07816 840 Gene3D Transferase(Phosphotransferase) domain 1 607 838 - -
Seca7g07816 840 SUPERFAMILY Protein kinase-like (PK-like) 515 824 IPR011009 -
Seca7g07816 840 FunFam Leucine-rich repeat protein kinase family protein 549 830 - -
Seca7g07816 840 MobiDBLite consensus disorder prediction 42 56 - -
Seca7g07816 840 Pfam Protein kinase domain 538 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07816 Seca-Chr7 182456737 182461769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07816 554 820 MAP Kinase Kinase Kinase AT1G63700 30.741 2.36e-22 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Seca7g07816 Pkinase 2.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07816 - - gmx:100819959 1326.61