Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07812 ATGCCGGTGAGGCAGATGAAAGAAAGCTCAGAGCAACACCTTGTGATCAAACCCCATTTGCAGAACCCCATGAATCCAGCAAAGAAGGCACCCAAAGCTTCTCAAAATGGCAAAGGTCCACCACCACTAGAAAGCCATAGCCAAACTTCACCTCACCCAAAGAACAAGGGAAGAAGAAGGGGCAGAGGTGGCAGAAAATCTGATCAAGGAGATGTTTTGATGAGGCCTAGTTGCAGGCCCTGCACTGTAACAAGTCCTGTAAATGGAAATGTTGAAAATGGCTACATCTCTAGTGACATAGATATGGGTTTTCCTACTTCAAGCAAGTCCTTGAGCTTTGCTCGTAGACCTGGGTATGGACAAGTTGGAACAAAATGTGTTGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCAATATGATGTTACTATTACCCCAGAAGTGTCTTCCAGAACAGTAAATAGGTCCATCATAGGAGAACTTGTGAGGCTGTATAAAGAGTCAGATTTGGGGATGAGACTTCCTGCATATGATGGCAGAAAAAGTCTGTACACTGCAGGACAGCTTCCCTTTGCCTGGAGAGAGTTTAAGATTAAGCTTGTAGATGATGAGGATGGAGTTAATGGCCCCAAGTCATCTTTCAGAAGGGAAAGAGAGTACAAGGTGGTGATCAAGTTTGTTGCACGGGCAAACTTGCATCACTTAGGCCAGTTTTTAGCTGGTAAGCGTGCTGATGCACCACAGGAGGCACTTCAAATTCTTGACATTGTACTAAGAGAACTATCAACTAAGAGGTATTGCCCCATTGGGAGGTCCTTCTTTTCACCTGATATTAGAACACCACAACGGCTTGGAGAGGGATTGGAATCATGGTGTGGATTTTACCAGAGTATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCATCTGCTGCATTCATTGAACCTCTTCCAGTAGTAGAATTTGTTGGCCAGCTATTGGGAAAAGATGTGCTGTCAAGGCAATTGTCGGATGCTGATCGCATTAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTGACACATAGAGGAAGTGTAAGAAGAAAATATCGCGTTTCAGGGTTGACTTCTCAACCAACAAGAGAACTTGTGTTTCCTGTTGATGAGAACTCAACTATGAAGTCAGTAGTGGAATACTTCCAAGAGATGTATGGTTTCACTATTCAACATACTCACCTTCCTTGCCTTCAAGTAGGAAACCAAAAGAAGGCTAATTATTTACCTATGGAGGCCTGCAAAATTGTTGAGGGGCAACGGTATACAAAAAGGTTGAATGAGAAGCAAATTACTGCTCTATTGAAAGTTACTTGCCAGAGACCTCGTGACCGGGAAAATGACATTTTACGGACCATGCAACAGAATGCTTATGACCAAGATCCTTATGCAAAGGAATTTGGAATTAAAATCAGTGAAAAGCTTGCTTCTGTTGAAGCACGAATTCTTCCTGCCCCATGGCTTAAATATCACGAAAGCGGGAAAGAAAAGAATTGTTTACCCCAAGTTGGCCAGTGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAGCCGGTGGGCATGCATAAATTTTTCACGGAGTGTGCAAGATAGTGTTGCTCGTACTTTTTGTAATGAGCTTGCTCAAATGTGTCAAGTATCTGGAATGGAATTTAATCCAGAGCCCGTTATCCCCATCTACAATGCCAAGCCTGAGCAGGTGGAGAAAGCTTTGAAGCATGTTTACCATGTGTCATCGAACAAAACTAAAGGAAAGGAACTGGAGCTTTTGTTAGCAATATTGCCAGACAATAATGGGTCTCTCTATGGTAAGCCACATGGGTTGGTAATAACTCTACAACATTGTTGCATGGTATGGATATATTGTTGTAAACATCTTTTGTTTTCAGGTGATCTCAAGCGTATTTGTGAAACTGACCTTGGTTTAATTTCACAATGCTGTCTGACAAAGCATGTCTTTAAAATCACTAAACAGTACTTGGCTAATGTGTCTCTGAAGATCAATGTTAAGATGGGAGGTAGAAACACTGTTCTTCTTGATGCTGTAAGCTGCAGAATACCATTGGTTAGTGACATACCAACCATAATTTTTGGAGCAGATGTTACCCACCCTGAAAATGGAGAAGATTCTAGTCCCTCAATAGCAGCTGTAGTAGCATCCCAAGACTGGCCTGAAGTAACAAAATATGCCGGTTTAGTGTGTGCACAAGCTCATAGACAGGAACTTATACAAGATTTGTACAAAACTTGGCTTGACCCTGTTCGTGGCACAGTTAGTGGTGGAATGATACGGGATGGTGTAAGTGAAGGGCAATTTTACCAAGTTTTACTTTATGAGTTGGACGCAATCCGGAAGGCATGTGCTTCCTTAGAACCAAACTATCAGCCTCCGGTAACTTTCATAGTTGTACAAAAGAGACATCACACTAGGTTGTTTGCAAACAACCATAGGGACAGGAGCAGTACAGATAAGAGTGGGAATATATTGCCTGGGACCGTCGTTGATTCTAAAATCTGCCATCCGACAGAATTTGATTTTTACCTCTGCAGTCATGCTGGCATCCAGGGTACTAGTCGGCCAGCTCATTATCATGTTCTATGGGATGAAAACAACTTCACAGCAGATGGAATTCAGTCTTTGACAAACAACCTTTATTATACATATGCCAGGTGTACGCGTTCTGTATCTGTTGTTCCTCCAGCATATTATGCACATTTAGCAGCCTTTCGAGCCCGTTTCTATATGGAACCAGATATGCAAGAGAATGGTTCTACAGGTGATGGTAATGCTAGTCATAGTTCCAAGGGAACAAGAGCATCTGGAGAGTGTGGTGTCAAGCCATTGCCAGCCTTGAAAGAAAATGTGAAGAGAGTAATGTTTTACTGTTAG 2961 0.4225 MPVRQMKESSEQHLVIKPHLQNPMNPAKKAPKASQNGKGPPPLESHSQTSPHPKNKGRRRGRGGRKSDQGDVLMRPSCRPCTVTSPVNGNVENGYISSDIDMGFPTSSKSLSFARRPGYGQVGTKCVVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRSIIGELVRLYKESDLGMRLPAYDGRKSLYTAGQLPFAWREFKIKLVDDEDGVNGPKSSFRREREYKVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSTKRYCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRQLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQHTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTMQQNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQDSVARTFCNELAQMCQVSGMEFNPEPVIPIYNAKPEQVEKALKHVYHVSSNKTKGKELELLLAILPDNNGSLYGKPHGLVITLQHCCMVWIYCCKHLLFSGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWLDPVRGTVSGGMIRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLYYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTGDGNASHSSKGTRASGECGVKPLPALKENVKRVMFYC. 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07812 986 Pfam N-terminal domain of argonaute 124 263 IPR032474 -
Seca7g07812 986 MobiDBLite consensus disorder prediction 946 962 - -
Seca7g07812 986 CDD Piwi_ago-like 483 939 IPR045246 -
Seca7g07812 986 Gene3D paz domain 318 443 - -
Seca7g07812 986 Pfam PAZ domain 348 455 IPR003100 GO:0005515
Seca7g07812 986 Pfam Argonaute linker 1 domain 273 322 IPR014811 -
Seca7g07812 986 Gene3D - 709 986 IPR036397 GO:0003676
Seca7g07812 986 Pfam Argonaute linker 2 domain 465 511 IPR032472 -
Seca7g07812 986 SUPERFAMILY PAZ domain 319 479 IPR036085 GO:0005515
Seca7g07812 986 ProSiteProfiles PAZ domain profile. 325 439 IPR003100 GO:0005515
Seca7g07812 986 MobiDBLite consensus disorder prediction 1 85 - -
Seca7g07812 986 MobiDBLite consensus disorder prediction 944 965 - -
Seca7g07812 986 SMART DUF1785_2 272 324 IPR014811 -
Seca7g07812 986 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 105 941 - -
Seca7g07812 986 FunFam Argonaute 10 503 648 - -
Seca7g07812 986 CDD PAZ_argonaute_like 324 438 - -
Seca7g07812 986 SMART PAZ_2_a_3 329 461 IPR003100 GO:0005515
Seca7g07812 986 Pfam Mid domain of argonaute 522 599 IPR032473 -
Seca7g07812 986 ProSiteProfiles Piwi domain profile. 613 940 IPR003165 GO:0003676
Seca7g07812 986 SMART Piwi_a_2 648 940 IPR003165 GO:0003676
Seca7g07812 986 Pfam Piwi domain 655 939 IPR003165 GO:0003676
Seca7g07812 986 Gene3D - 503 703 - -
Seca7g07812 986 SUPERFAMILY Ribonuclease H-like 605 941 IPR012337 -
Seca7g07812 986 FunFam Protein argonaute-2 318 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07812 Seca-Chr7 182398452 182407382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07812 1 986 Eukaryotic Initiation Factors Gene Family AT5G43810 77.087 0.0 1582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07812 K11593 - gmx:100816999 1791.16