Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07807 ATGGAAGATGATGGGTTGGTGCTATTGTTCTATGCCCCTGGTCAGAAGAAGTTGAGGTTTCTGCTCTCCCCTGTGGCAATGGTGCTGTTCATGCTGTTACTTCTCTCTCCATTTGCTTCCCCACTCAGTGATGAAGGACAAGCATTAATGGCGATCAAGGCTTCCTTGAGCAATATAGCAGACATACTCCTTGATTGGGATGACGTGCATAATGAAGACTTCTGCTCTTGGCGTGGAGTCTTCTGTGACAATGTCAGCCTTACTGTCATATCTCTGAATCTATCGAGCTTGAACCTGGGTGGAGAGATATCACCAGCCATTGGTGATTTAGGAAACTTGCAATCCATAGACCTACAAGGGAATAAACTATCTGGTCAAGTTCCAGATGAAATTGGCAACTGTGCTGAGCTTATTCATCTGGATTTGTCTGATAATCAGCTATATGGTGATATACCTTTCTCTATCTCAAAGCTAAAGAAACTAGAGTTCTTGAATTTAAAGAGTAATCAGCTGACTGGTCCTATCCCTTCAACTTTAACCCAAATTCCAAACCTGAAGACTCTTGATCTTGCTCGAAATAGGCTCACTGGAGAGATTCCAAGACTACTATATTGGAATGAAGTCTTGCAGTACCTAGGGCTGCGAGGGAACTTGTTGAGTGGAACTTTGTCCCCTGATATCTGTCAATTAACTGGTTTGTGGTATTTTGATGTGAGAGGCAATAATTTGACTGGCACTATACCTGACAGTATTGGAAACTGTACAAGTTTTGAAATCTTGGATATATCATATAATCAGATTAGTGGGGAAATTCCATATAATATTGGGTTTCTGCAAGTTGCTACATTGTCACTTCAAGGAAATAGATTAACTGGGAAGATTCCAGAAGTGATTGGTTTGATGCAAGCCCTTGCCATTTTGGATTTGAGCGAGAATGAGTTAGTGGGACCAATTCCTCCTATACTTGGAAATCTCTCTTTTACTGGCAAGCTGTACCTTCATGGAAACATGCTTACTGGTCCAATACCACCTGAACTTGGCAATATGTCTAAATTAAGCTACCTGCAATTGAATGACAATCAACTAGTGGGAAAAATTCCTGATGAAATTGGGAAGCTGGAACATTTGTTTGAATTGAATCTTGCCAATAATAATCTTGATGGATCTATTCCACATAACATAAGCTCCTGCACTGCCTTAAATCAGTTTAATGTGCATGGTAACCAGTTAAGCGGTTCTATACCATTGAGTTTTCGCAGCCTTGAGAGTCTGACTTACTTGAATCTCTCTGCGAATAACTTCAAGGGGAATATACCTGTTGAGTTGGGCCATATAATTAATCTTGATACGCTGGATCTATCTAGCAATAATTTTTCTGGGCATGTCCCAGCTTCTGTCGGTTATCTAGAGCATCTTTTGACCCTTAACTTGAGTCATAACCGCCTTGATGGTACCTTTCCTGCTGAGTTTGGAAATCTCAGAAGCATACAGATTATTGATATGTCATTCAACAACCTGTCTGGAAGCATTCCTCCGGAAATTGGGCAGCTGCAAAACCTTGCATCTCTGATTTTGAACAACAATGACTTGCGTGGGAAGATTCCTGATCAGCTGACTAATTGTTTCAGTCTTTCCTCTTTGAACTTCTCTTATAATAACTTTTCTGGAGTTATTCCATCTATGAAGAATTTCTCACGATTTTCAGCTGACAGCTTCATTGGAAATCCTTTGTTATGTGGGAATTGGGTAGGATCAATCTGTCGTCCTCATGCACCAAAGTCAAGAGTGATTTTTTCGAGAGTTGCTGTTGTATGTCTTTCTCTTGGTATCATTATGCTATTGGCCATGGTGATTGTTGCTTTCTATAGATCAAGCCAATCAAAGCAAATGATGAAGGGTTCTAGCAGAACTGGGCAAGGCATGTTGAATTCTAGAACTAGGCCCCCTAAACTGGTAGTTCTTCATATGGATATGGCTATCCACACCTTGGATGATATAATGAGAAGCACTGAGAATCTAAGTGAGAAATATATAATTGGGTATGGTGCCTCTAGTACAGTGTACAAGTGTGCTTTGAAAAATTCCCGGCCAATTGCAGTCAAGCGATTGTACAACCAGCATCCTCATGATTTAAGGGAATTTGAAACAGAACTTGAAACAATCGGCAGCATTAGACATAGAAACCTTGTCACCTTGCATGGTTATGCCCTTACTCCCTGTGGGAATCTCCTTTTCTATGATTATATGGCAAATGGATCTCTTTGGGATCTTCTACATGGTCCCCTGAAGGTAAAACTTGATTGGGAAACACGGTTGAGGATTGCTGTTGGAGCTGCTGAAGGACTTGCTTATCTCCATCATGACTGCAACCCTCGAATTGTTCATAGGGACATTAAGTCTTCAAATATTTTACTGGATGAGAACTTTGAGGCTCACCTCTCTGATTTTGGTACTGCAAAATGCATCTCAACCACAAGAACTCACGCATCAACTTACGTCCTTGGAACTATAGGCTACATTGACCCTGAGTATGCACGAACATCTAGGCTGAATGAAAAATCAGATGTCTATAGCTTTGGCATTGTTCTGCTAGAACTACTTACTGGGAAAAAGGCTGTGGACAATGACTCTAATTTGCATCAACTGATATTGTCCAAGGCAGATAATAACACAGTAATGGAGGCTGTGGATCCAGAAGTCTCTATTACCTGTATTGATCTGGTCCATGTTAAGAAAACCTTTCAACTTGCTTTGCTTTGCACAAAAAGGAACCCTTCTGAGAGGCCTACCATGCATGAAGTAGCCAGGGTTCTGGTATCTCTACTTCCTGCACCTCCAAGTAAAGTGCTTGGTGCACCTGCTAAGACTTTTGACTATGCGCATTTTGTGAAGGGACAACACCGGAAAATGGATGGGCTACAACCTCAGCAGGACAACAATTCAACTAATGCTCAATGGTTTGTACGCTTTGGAGATGTTATTTCAAAGAGCACACTCTGA 3000 0.4113 MEDDGLVLLFYAPGQKKLRFLLSPVAMVLFMLLLLSPFASPLSDEGQALMAIKASLSNIADILLDWDDVHNEDFCSWRGVFCDNVSLTVISLNLSSLNLGGEISPAIGDLGNLQSIDLQGNKLSGQVPDEIGNCAELIHLDLSDNQLYGDIPFSISKLKKLEFLNLKSNQLTGPIPSTLTQIPNLKTLDLARNRLTGEIPRLLYWNEVLQYLGLRGNLLSGTLSPDICQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGPIPPILGNLSFTGKLYLHGNMLTGPIPPELGNMSKLSYLQLNDNQLVGKIPDEIGKLEHLFELNLANNNLDGSIPHNISSCTALNQFNVHGNQLSGSIPLSFRSLESLTYLNLSANNFKGNIPVELGHIINLDTLDLSSNNFSGHVPASVGYLEHLLTLNLSHNRLDGTFPAEFGNLRSIQIIDMSFNNLSGSIPPEIGQLQNLASLILNNNDLRGKIPDQLTNCFSLSSLNFSYNNFSGVIPSMKNFSRFSADSFIGNPLLCGNWVGSICRPHAPKSRVIFSRVAVVCLSLGIIMLLAMVIVAFYRSSQSKQMMKGSSRTGQGMLNSRTRPPKLVVLHMDMAIHTLDDIMRSTENLSEKYIIGYGASSTVYKCALKNSRPIAVKRLYNQHPHDLREFETELETIGSIRHRNLVTLHGYALTPCGNLLFYDYMANGSLWDLLHGPLKVKLDWETRLRIAVGAAEGLAYLHHDCNPRIVHRDIKSSNILLDENFEAHLSDFGTAKCISTTRTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHQLILSKADNNTVMEAVDPEVSITCIDLVHVKKTFQLALLCTKRNPSERPTMHEVARVLVSLLPAPPSKVLGAPAKTFDYAHFVKGQHRKMDGLQPQQDNNSTNAQWFVRFGDVISKSTL. 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07807 999 SMART LRR_typ_2 373 397 IPR003591 -
Seca7g07807 999 SMART LRR_typ_2 182 206 IPR003591 -
Seca7g07807 999 SMART LRR_typ_2 110 134 IPR003591 -
Seca7g07807 999 SMART LRR_typ_2 158 181 IPR003591 -
Seca7g07807 999 SMART LRR_typ_2 230 254 IPR003591 -
Seca7g07807 999 SMART LRR_typ_2 517 541 IPR003591 -
Seca7g07807 999 SMART LRR_typ_2 469 492 IPR003591 -
Seca7g07807 999 SMART LRR_typ_2 421 445 IPR003591 -
Seca7g07807 999 SMART LRR_typ_2 349 372 IPR003591 -
Seca7g07807 999 Gene3D Phosphorylase Kinase; domain 1 638 748 - -
Seca7g07807 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Seca7g07807 999 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 42 206 - -
Seca7g07807 999 ProSiteProfiles Leucine-rich repeat profile. 184 206 IPR001611 GO:0005515
Seca7g07807 999 SMART serkin_6 673 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07807 999 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 644 748 - -
Seca7g07807 999 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 181 939 - -
Seca7g07807 999 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 207 316 - -
Seca7g07807 999 Gene3D Ribonuclease Inhibitor 464 589 IPR032675 -
Seca7g07807 999 Gene3D Ribonuclease Inhibitor 367 463 IPR032675 -
Seca7g07807 999 Gene3D Ribonuclease Inhibitor 42 206 IPR032675 -
Seca7g07807 999 Gene3D Ribonuclease Inhibitor 280 366 IPR032675 -
Seca7g07807 999 ProSitePatterns Protein kinases ATP-binding region signature. 679 701 IPR017441 GO:0005524
Seca7g07807 999 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 749 948 - -
Seca7g07807 999 ProSiteProfiles Protein kinase domain profile. 673 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07807 999 Pfam Protein kinase domain 676 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07807 999 Pfam Leucine Rich repeat 253 270 IPR001611 GO:0005515
Seca7g07807 999 Pfam Leucine Rich repeat 183 198 IPR001611 GO:0005515
Seca7g07807 999 Gene3D Transferase(Phosphotransferase) domain 1 749 945 - -
Seca7g07807 999 SUPERFAMILY Protein kinase-like (PK-like) 647 938 IPR011009 -
Seca7g07807 999 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 317 590 - -
Seca7g07807 999 Pfam Leucine rich repeat 447 506 IPR001611 GO:0005515
Seca7g07807 999 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Seca7g07807 999 Gene3D Ribonuclease Inhibitor 207 279 IPR032675 -
Seca7g07807 999 Pfam Leucine rich repeat N-terminal domain 43 83 IPR013210 -
Seca7g07807 999 SUPERFAMILY L domain-like 323 580 - -
Seca7g07807 999 SUPERFAMILY L domain-like 42 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07807 Seca-Chr7 182329313 182336988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07807 112 999 Receptor kinase-like Gene Family AT5G07180 77.165 0.0 1368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Seca7g07807 Pkinase 4.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07807 K20718 - gmx:100811653 1738.01