Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07793 ATGATCGTGATAGCTATGGGTGAACGCATTTTCCCCATCCTCATCCAGTGGGCCTCAAGTTTGCAAAGAGCACATACAGATATAGGAATAGGAATTCACAATAACTCTTCAACATCTGCAATTCCTCAAAACAAATCTTCTGTTCTGGCGATGCCATCTCGGCAGTTATCCACGTCAGCATCACCTCCCAACCACAATCATGTTTCATCTGCTCTCAGTTTCACCGCCTCCGTCTGCCCTCTCATCCTTCTGCTCCTTCTCTGCGTTCGGAAGCGGAAACGAACCACCCCTTCCTCTGACTCTGACTCCAACCCCCCTCACCCTTTCTCCTACCCTCTCCTCCGCCGCGCCACCAACTCTTTCTCCACCCTCCTCGGCCATGGCGGCTTCGGCCCCGTTTTCTCCGGCTCCCTCCCACCCGCCGGAAAACCAATCGCCGTCAAGCTAATGGACTCCACCTCCCTCCAGGGCGACCGCGAGTTCCACAACGAACTCTTCTTCGCCTCCAGGCTCCGCTCCGACCTCCTCGTTCCCCCTATTGGCTTCTCCTCCGACCCCAAACGCCATCGTTTCTTGCTTGTCTACGACCTCATGCATAACGGTAACCTCCACGACGCCCTTCTCCGTCGCAAGTGCCCTCAACTCATGCTCTGGGACAACCGCTTCAACATCATCGTTGACATTGCAAGAGCCCTCCACTACCTTCACTCCTGCGATCCCCCGGTCATTCACGGTGACATCAAGCCCAGTAACATTCTCCTCGACCATTGCTTTTCCGCCAAAATCGCCGATTTTGGACTTGCCCGGTTGAAAACCGTATCCCAGCTTGAAGTTAAAGTGGAAAGCGACAACAAGAGAAAGGAACAAGAGTTGGAGAGTGATGGTGGATCGGTGGTGGAGGAAGCTGAGAGTGTCAATGCTGGATTGGAAGGTGAGATAGAGAATCAAATTGGGAGCGTGAAGGATTATGTGATGGATTGGATTGGAAAGGAGGTGAACGAGGAAAGGCCAAAAGGGGAATGGGTAGGTGCTGGGTCTAGCAGTGGAATAGCACAGAAAAACAAGAGCGGGAAGAAATTGGAGTGGTGGGAATCAATGGATGAGGAAAAGGGTGGTGCTTTTGGTGTTCTGAAGAAGGAGAAGAGAAGGCCAGCAAGGGAATGGTGGAAGGACGAGTATTCTGAAGAGCTTGCAAAGAAGCAAAAGAAAAAGAAGAAACAACAGGAAAAAATGAGAAACAGTGATGACAATAATGGTGACTATTGGTGGGAGAGAGATGATGATTCTTTGTATTCTGATGTAAAAAAGAGTAATAAAAACCGTGGTAGGAATGGTCGTGATAGTGCAGATTCGTGGTTCAGTGGGGAGCTACGGGGAACACGATGGAATAGCTATGATTCTGGTAGTGGAGAAATACCCAAGAGTGGTGGTATCAGTAGTACTCCAAGTATGAGGGGAACACTTTTCTATGTTGCTCCTGAGTATGGCTATAGTGGTGATGTATCAGAGAAGTGTGATGTGTATAGTTTTGGGGTTCTATTGCTTGTTATCATTTCTGGGAGGCGTCCACTTCAAGTGACTGGTTCACCCTCAGAGTTTCAGCGAGCGAACCTTGTGTCTTGGGCTCGCCATTGTGCACGCAATGGGAAGCTTCTTGAATTGGTTGATCAGTCTATTCAGTCATTGGATGAAGAGCAGGCTCTTCTCTGCATCAAGGTTGCTCTGCTTTGTTTGATTAAATTACCTGATCGTCGTCCTTCAATGAAGGAGGTTGTGGGAATGCTTTGTGGGGAGTTGGAGCCACCCCAATTTCCTGTTGAGTACTCAAAATCTCACTTCTCATTCAAGTCTCGGAAAGAAGCCCGGTGA 1869 0.4933 MIVIAMGERIFPILIQWASSLQRAHTDIGIGIHNNSSTSAIPQNKSSVLAMPSRQLSTSASPPNHNHVSSALSFTASVCPLILLLLLCVRKRKRTTPSSDSDSNPPHPFSYPLLRRATNSFSTLLGHGGFGPVFSGSLPPAGKPIAVKLMDSTSLQGDREFHNELFFASRLRSDLLVPPIGFSSDPKRHRFLLVYDLMHNGNLHDALLRRKCPQLMLWDNRFNIIVDIARALHYLHSCDPPVIHGDIKPSNILLDHCFSAKIADFGLARLKTVSQLEVKVESDNKRKEQELESDGGSVVEEAESVNAGLEGEIENQIGSVKDYVMDWIGKEVNEERPKGEWVGAGSSSGIAQKNKSGKKLEWWESMDEEKGGAFGVLKKEKRRPAREWWKDEYSEELAKKQKKKKKQQEKMRNSDDNNGDYWWERDDDSLYSDVKKSNKNRGRNGRDSADSWFSGELRGTRWNSYDSGSGEIPKSGGISSTPSMRGTLFYVAPEYGYSGDVSEKCDVYSFGVLLLVIISGRRPLQVTGSPSEFQRANLVSWARHCARNGKLLELVDQSIQSLDEEQALLCIKVALLCLIKLPDRRPSMKEVVGMLCGELEPPQFPVEYSKSHFSFKSRKEAR. 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07793 622 SUPERFAMILY Protein kinase-like (PK-like) 103 608 IPR011009 -
Seca7g07793 622 MobiDBLite consensus disorder prediction 338 357 - -
Seca7g07793 622 PANTHER OS07G0586332 PROTEIN 316 621 IPR044576 -
Seca7g07793 622 Coils Coil 390 417 - -
Seca7g07793 622 Gene3D Transferase(Phosphotransferase) domain 1 105 291 - -
Seca7g07793 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Seca7g07793 622 SMART serkin_6 119 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07793 622 MobiDBLite consensus disorder prediction 397 419 - -
Seca7g07793 622 Gene3D Transferase(Phosphotransferase) domain 1 465 603 - -
Seca7g07793 622 Pfam Protein kinase domain 123 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07793 622 ProSiteProfiles Protein kinase domain profile. 119 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07793 Seca-Chr7 182109977 182113787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07793 466 602 Receptor kinase-like Gene Family AT2G43700 34.058 2.74e-15 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Seca7g07793 Pkinase 6.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07793 - - aprc:113872924 776.933