Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07791 ATGATTCGTAGAGAAGTTGAAAGACAAAGGAGGACTCATATGTCTATCTTATGTGCATCCCTCCGCTCTGCACTCCCTTTTCATCTCATCAAGGGAAAGCGTTCGGTATCAGATCACATAGGAGAGGCTGCAAATTATATCCAATTTTTGAAGGAAAAGATTAATGGACTGGAAATGAAGAGAGATAGGCTGAAATTAGAGATGGTTAAAAGTGAATCTGCAGCAGATTTAAGTAGTAGTGTTACTGTACAACAAGCCAACATCAGTCTCATTCCAGACTACGGTGTGGAAATTGCCATATGCAGTGGTTTTGATAAGGAGGGATGCTCACCTCTATCAGATTTGTTGGAAATATTGTTTCAAGAAGGATGTGATGTTGTTAGCTGTGTTTCAACCCAAGTAAATGGGAGGATATTTCATACTATTAACTCTCAGGTGGAGGACCTGACACGCCTTCATCTTGCTAGGCTTCAATACAAATTGGATCATGCAATCTTGTTGTCAAGGTAA 510 0.4 MIRREVERQRRTHMSILCASLRSALPFHLIKGKRSVSDHIGEAANYIQFLKEKINGLEMKRDRLKLEMVKSESAADLSSSVTVQQANISLIPDYGVEIAICSGFDKEGCSPLSDLLEILFQEGCDVVSCVSTQVNGRIFHTINSQVEDLTRLHLARLQYKLDHAILLSR. 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07791 169 Gene3D - 2 79 IPR036638 GO:0046983
Seca7g07791 169 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 50 IPR011598 GO:0046983
Seca7g07791 169 Pfam Helix-loop-helix DNA-binding domain 4 50 IPR011598 GO:0046983
Seca7g07791 169 CDD bHLH_AtORG2_like 1 67 - -
Seca7g07791 169 Coils Coil 47 74 - -
Seca7g07791 169 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 69 IPR036638 GO:0046983
Seca7g07791 169 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 3 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07791 Seca-Chr7 182067941 182068764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07791 4 168 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 35.057 2.10e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Seca7g07791 HLH 2.3e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07791 - - ccaj:109790384 217.624