Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07776 ATGGGTAAGGAATGGTATTGGAGTGGAAGGTCCTCCAAGAGAGGTGGAAGAGCTGAAACAGAAATCCCTTCTGGTTGTATGTGTGCAGTCTTTCAGGCCTTTGATTTTCATCCATTTCACTTTTCCATGAACCACCAACAACCCTCTTTCAAATCTGCCTCTCGTATTCCACTCTCAGATCACCACACTGTCCCAAAAGGAGCTGAAGCACCTAGGAATAGCTTGGAATCAGAAGATGGTACAGTGTCATCCATCTCAAAAGAGGAAAATTTTAAAATCCCATTGATTTTGAAAATCCAGAAGAACATTAGAATCAAGACAAGAGCAGGAAGTTTGAGTGATTTTTCTTCAGAAATCAGCAGCTCTCCAGGGACCAAAACACCAACATTGGTTGCAAGATTGATGGGTCTTGATCTTCTTCCTGATACACATTCCTCCTCTTCCTCTTCTTCTTCATGTCTTTCTACTCCAAAACGACAAGGCCATCCACATCAGCAGCACAATAAGCAAAGGCAACACATCCAAATAATGAAACACAGACACAGCATAGACAGTACAAGAAGATCAGATGTTGAGCATAGACTATCTCTCCAAATCAACAAGGAGAATATGGGTCTTGGTGAGGATTTGGAGGCTCCTCGGTTTTCATTTTCAAAGAGGAAATATGATGAGAACAATAGCAGAAGTCCAAGCCACTATGCAAGGCAAATTGTTAAACAGGTTAAAGAAAGTGTAAGCAGGAAAGTTGGGCTTGACATCACCAACACAGTCAAAAACAGAGAGCATGAAAGAGAAGATTTTGTTAGCCAATTCAAATTCAAGAAACCTCCCAAGAAAACTGTAGATGAATCCAGCACAGGAAAACACTCAAACTCATCTTACTCCCCAAGACTCAGTAGATTCATGGATACCAACCATAAACCAAGCACAAAACCATCACCAATTACTCCAAAAGACCAAAACACACGCCCGGTACTAAAACCATCATCACCTCCACCTGTGGTCAACATTGAAGCACAGCTTTCAAGAGTTTCAACAAAGTCAAAGCCTCAAATATTGTCCGAGAAGGAGTTGCAGCAGAACCAAAAATCAGTCCCAAATTACCAGAAAACTACCAATGGAAAGTTGAGTTCACGGCTCAACAAGCCTCCACAGACCTCAATCAGAAACAAGCAAGAAGAGCCATTTATTATTCGGCCACCATCAACCACTAGAGCTAATGACACCAAAACCAAAAGCAAGAGAACTCATCCACTTTCAAGCAATCTTCTCAGTCCAAATCTTCTCCATGTCAAGACAGACCCTTCTCCTCCAGCAACCAAAATTCCTCAAAAACAGGTACCAATTAATCAAATTCCAACTTTTGTTACTTCTAGAAAAAGAAAAAACAAATCTCAGGTAACTGATCATGAGACCCGAGAAGCGAAACACAGCACACAGTTATTTAGTTGTTCGCGCCAGAAGTACAAACAAGAAGTGACGCACACACTCACCACCCGAGGAACCAACGATGAAGACAAATCTAACGGTGCGATCACCGCCACCACCGGAGCTGACGATGAAGGAACAGAATATCAGTACATCACAACCATTCTAAGCCGTACTGGGGTACTACACAATGCCACAGTACCTCACTTTCAATTTCAATGGTTCTCTTCTACCCATCCATTGGACCCTTCACTTTTTCACCGTCTCGAATTCTACCCATCATCCAATTCCTTTGCTTTTTCCCCGGACAACGATAAAGATAGAAACTTTATGAAGAAAAACCATCTGGGTCCACGCTGTAACCGCAGATTACTGTTTGATCTGGTCGATGAGGTGCTGTCGGAGATTCTGGTTAGGCCAAGGTGTTATCGGGGGCGGTTGTTGGAGACAGTGTGGAAGAGGGTTCGGAGTTTCCCACGTGCGAAATGCGAGTTTTTGGAGGACATTGATGGGTTGATAGAGATGGAGAACATACAGGGGAAGATGAAGGAAGAAGAAGGGGAAAGGTTGGTGGCGGAGATCGAAGGGAAGATAATGGAGACGTTGGTGCATGAAACGATAACCGTTATGGTTGGTGGCGTGGAAGGGTGTGTCCGTACATAG 2091 0.4333 MGKEWYWSGRSSKRGGRAETEIPSGCMCAVFQAFDFHPFHFSMNHQQPSFKSASRIPLSDHHTVPKGAEAPRNSLESEDGTVSSISKEENFKIPLILKIQKNIRIKTRAGSLSDFSSEISSSPGTKTPTLVARLMGLDLLPDTHSSSSSSSSCLSTPKRQGHPHQQHNKQRQHIQIMKHRHSIDSTRRSDVEHRLSLQINKENMGLGEDLEAPRFSFSKRKYDENNSRSPSHYARQIVKQVKESVSRKVGLDITNTVKNREHEREDFVSQFKFKKPPKKTVDESSTGKHSNSSYSPRLSRFMDTNHKPSTKPSPITPKDQNTRPVLKPSSPPPVVNIEAQLSRVSTKSKPQILSEKELQQNQKSVPNYQKTTNGKLSSRLNKPPQTSIRNKQEEPFIIRPPSTTRANDTKTKSKRTHPLSSNLLSPNLLHVKTDPSPPATKIPQKQVPINQIPTFVTSRKRKNKSQVTDHETREAKHSTQLFSCSRQKYKQEVTHTLTTRGTNDEDKSNGAITATTGADDEGTEYQYITTILSRTGVLHNATVPHFQFQWFSSTHPLDPSLFHRLEFYPSSNSFAFSPDNDKDRNFMKKNHLGPRCNRRLLFDLVDEVLSEILVRPRCYRGRLLETVWKRVRSFPRAKCEFLEDIDGLIEMENIQGKMKEEEGERLVAEIEGKIMETLVHETITVMVGGVEGCVRT. 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07776 696 MobiDBLite consensus disorder prediction 357 392 - -
Seca7g07776 696 MobiDBLite consensus disorder prediction 162 176 - -
Seca7g07776 696 MobiDBLite consensus disorder prediction 58 84 - -
Seca7g07776 696 MobiDBLite consensus disorder prediction 286 325 - -
Seca7g07776 696 MobiDBLite consensus disorder prediction 462 477 - -
Seca7g07776 696 MobiDBLite consensus disorder prediction 457 479 - -
Seca7g07776 696 Pfam DUF761-associated sequence motif 116 146 IPR032795 -
Seca7g07776 696 MobiDBLite consensus disorder prediction 141 190 - -
Seca7g07776 696 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 689 - -
Seca7g07776 696 Coils Coil 651 671 - -
Seca7g07776 696 MobiDBLite consensus disorder prediction 262 334 - -
Seca7g07776 696 MobiDBLite consensus disorder prediction 262 285 - -
Seca7g07776 696 MobiDBLite consensus disorder prediction 141 161 - -
Seca7g07776 696 Pfam Domain of unknown function (DUF4378) 524 681 IPR025486 -
Seca7g07776 696 MobiDBLite consensus disorder prediction 357 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07776 Seca-Chr7 181933321 181936355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07776 103 684 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 32.543 4.07e-46 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07776 - - gmx:102659931 818.92