Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07772 ATGGAAGCGAATCCTCCCCACGACGGCGATTTCAGCGAAGGAGAAAACGAAAGCGAAAGCGACACCCAAAGTGCCGATAACTCTCCCTCGGAGACGACGGCGTCATTGGTGGGCCCGACGGAGCCGTTGCCGCCGCCGGTGTCGGCTCCACTGAAAGAAGAGCGGACGGAGACTGAGAACAGCGTGGAGGAGTCTCTCTCGGTGGGCGTTATTCCTATGCCGTTGACGATGTCAACGCCGGCGGCGGCGAAGAAACCGTCGAAGGACCGTCACACGAAAGTGGAGGGTCGCGGCCGAAGAATCCGAATGCCGGCAACCTGTGCCGCCAGGATCTTCCAGCTGACCCGGGAGCTCGGTCACAAGTCTGACGGAGAAACAATCCGGTGGTTGCTTGAGCACGCTGAACCGGCGATCATAGAAGCCACCGGCACCGGAACTATCCCCGCCATCGCGGTGTCCGTGGGCGGCACCTTAAAGATTCCAACTTCCTCGGCGGCGAGGCCAGACGGAGAAGACACCCCGAGGAAGCGAAGGAGGAGAGCATCAAACAGTGAATTCATTGATATGAACGATCAAGTTTCAGTGTGTTCAGGGCTTGCACCAATTGCTCAAACCGCATACGGTGGTGGCAGTGGCAGTGGTAGCGTTAGTGGTGGTGGACTGGTCCCTTTGTGGCCTGTGGCAAGTGGTGGTGGGTCTAATGGTACAGGGCCTTTCTTCATGTTTCCAAACTCTGCTAACCGGCCTCAGTACTGGGCCATTCCTGCAACTGCGGCCCCGTTTTTCAATGTGCAAGCCAGACCCATTTCGGGTTTTGTTTCTGCTATGCACATGCAACAACAATCAGGGGGTCACACTTCAAACCCTTCCTCCACTTTGGCCCCTGCTTTGAGCTCAGCAACAACTACTACAACTAATGCTAGTAGTACTATTACTACTTCTGCTGCTACCTCTTCCTCCACTTCTACACCCACCCAGATGCTCAGGGATTTCTCTCTGGAAATTTATGACAAGAAAGAGCTACAATTTTTGGGTCGCCCTGCTGCAAATTCAGAACCACCTCCTCCAACTTCAAAGCCTTGA 1083 0.5503 MEANPPHDGDFSEGENESESDTQSADNSPSETTASLVGPTEPLPPPVSAPLKEERTETENSVEESLSVGVIPMPLTMSTPAAAKKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSAARPDGEDTPRKRRRRASNSEFIDMNDQVSVCSGLAPIAQTAYGGGSGSGSVSGGGLVPLWPVASGGGSNGTGPFFMFPNSANRPQYWAIPATAAPFFNVQARPISGFVSAMHMQQQSGGHTSNPSSTLAPALSSATTTTTNASSTITTSAATSSSTSTPTQMLRDFSLEIYDKKELQFLGRPAANSEPPPPTSKP. 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07772 360 MobiDBLite consensus disorder prediction 160 185 - -
Seca7g07772 360 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 339 IPR005333 GO:0003700
Seca7g07772 360 MobiDBLite consensus disorder prediction 21 37 - -
Seca7g07772 360 MobiDBLite consensus disorder prediction 1 97 - -
Seca7g07772 360 Pfam TCP family transcription factor 87 166 IPR017887 -
Seca7g07772 360 ProSiteProfiles TCP domain profile. 87 141 IPR017887 -
Seca7g07772 360 MobiDBLite consensus disorder prediction 280 325 - -
Seca7g07772 360 MobiDBLite consensus disorder prediction 169 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07772 Seca-Chr7 181900911 181902413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07772 78 344 TCP Transcription Factor Family AT5G51910 53.091 3.79e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Seca7g07772 TCP 1.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07772 - - tpra:123922458 395.586