Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07767 ATGGCTGTTGCCAGGAGCAACAGCAGCAGTGAACCTTCTACATCATACAATTGTTACAAAGTAGCAAGCTTGACTGAAACCATATTAGACACAAAGCAAACTGCTAATTTGAAAGATCGATACATTCTTGGGGAGCAATTGGGTTGGGGACAGTTTGGTGTCATAAAAGCATGCTCTGACAAACTGACAGGAGAGCTTTTGGCCTGCAAATCAATTGCTAAAGATAGGCTGGTTACCTCAGATGATATGCAGAGTGTTAAACTTGAAATTGAGATAATGGCTAAGTTATCTGGGCACCCAAATGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAAGACTTTGTTCATTTGGTGATGGAGCTTTGTGCTGGAGGGGAGCTGTTTCACTTGTTAGAGAAGCATGGGAGGTTTTATGAATCTGAAGCAAGGGTTCTCTTTCGGCATCTCATGCAGATGGTTTTGTATTGTCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAAAACATTCTCTTAGCAACTAGATCCTCCTCATCTCCAATTAAATTGGCAGACTTTGGGCTTGCAACCTACATCAAGCCTGGACAGAGTTTGCATGGGTTAGTTGGGAGTCCATTTTATATAGCTCCAGAGGTGCTGGCAGGTGCATATAACCAGGCTGCTGATATTTGGAGTGCAGGGGTTATTCTTTACATTCTACTAAGTGGGATGCCTCCATTTTGGGGAAAGACAAAATCACGGATATTTGAAGCTGTTAAGGCTGCTGATTTGAGGTTCCCTTCTGAACCTTGGGATTACATTTCTGAATCTGCTAAGGATTTAATTAGGGGAATGCTCTGCACAGAACCTTCTCAAAGGCTCACTGCCCAGGATGTTTTGGATCTGAACTTTACCTTTGTAGATCATTGCTGGATGGAAAGCAATCAAACATATCCTGAACTAAGTGGAGAGTGGGATGTTAACCGCAACTCATTCTCTGCCTCATTTATGTCTAGGAATCAGGACATCAGCTTTGGTGCTGGATCACCTATGTGTGATGCTCAATCACCTACTTTCACATGCAAATCATCATTTTCTTCCATTTTTGTGGAACCAGTGACACCTTGTTCTGCTACTGGTGGGTTTTCATTTGAGAGTTCAGGTGGTTCCACTGATTTGGAATTTTCTTCTCCTTTTCCCTCCATGCCTAGCTTTGCATTTCTTAGCCCCAGTTCTGTTACTGAGCAAAGGAGTTGTGTGTTAGAGTTCTCAACTAACGCGTCAGAAGTAAATGCAATTGCTGGAGACTCTCGCCTTTGCTTTGGACATCATATTAAAGAAAGGGATCTCAAGCCTGTAGAGGCTAAAAGGGCAGGTGGAACAAATGGCAATAGGGCATTGGGATTCCACAGCAAGAGAAACCGGACAATTGGACTCGGTGAGTGTGAGCAACTTGATCTTGTGGTGACTGAATCAGTGATTCGTTGGTCATCATGCACACAACTTCCAACATCACCAAGATCATCTCTTGTCTGTTGA 1521 0.43 MAVARSNSSSEPSTSYNCYKVASLTETILDTKQTANLKDRYILGEQLGWGQFGVIKACSDKLTGELLACKSIAKDRLVTSDDMQSVKLEIEIMAKLSGHPNVVDLKAVYEEEDFVHLVMELCAGGELFHLLEKHGRFYESEARVLFRHLMQMVLYCHENGVVHRDLKPENILLATRSSSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADIWSAGVILYILLSGMPPFWGKTKSRIFEAVKAADLRFPSEPWDYISESAKDLIRGMLCTEPSQRLTAQDVLDLNFTFVDHCWMESNQTYPELSGEWDVNRNSFSASFMSRNQDISFGAGSPMCDAQSPTFTCKSSFSSIFVEPVTPCSATGGFSFESSGGSTDLEFSSPFPSMPSFAFLSPSSVTEQRSCVLEFSTNASEVNAIAGDSRLCFGHHIKERDLKPVEAKRAGGTNGNRALGFHSKRNRTIGLGECEQLDLVVTESVIRWSSCTQLPTSPRSSLVC. 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07767 506 FunFam Calcium-dependent protein kinase 1 43 126 - -
Seca7g07767 506 Gene3D Transferase(Phosphotransferase) domain 1 128 328 - -
Seca7g07767 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Seca7g07767 506 Pfam Protein kinase domain 43 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07767 506 ProSiteProfiles Protein kinase domain profile. 41 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07767 506 SUPERFAMILY Protein kinase-like (PK-like) 38 346 IPR011009 -
Seca7g07767 506 FunFam Phosphoenolpyruvate carboxylase kinase 128 322 - -
Seca7g07767 506 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Seca7g07767 506 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Seca7g07767 506 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 333 - -
Seca7g07767 506 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07767 506 CDD STKc_CAMK 40 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07767 Seca-Chr7 181818730 181823609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07767 24 316 EF-hand Containing Proteins AT3G57530 46.758 3.70e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca7g07767 Pkinase 2.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07767 - - gmx:100776088 792.727