Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07760 ATGATATCAGGTCGCTGTGCAGCTTGTAAGAATCAAAGAAGGAAGTGCCCTTCAGATTGCATCTTCTCTCCTTACTTTCCTCCTAATGATCCTCAAAGATATGCCATTGTTCACAGAATCTATGGTGGCAGCAACGTCGGAAGAATGCTTCAGCAAATTCCACCCTATGTCCGAGCACAGGCTGCAGATTGTTTACATTATGAAGCACAATGTCGTGTTCAAGACCCTGTTTATGGTTGTTTTGGAATTATCTCTCAGCTGGTTCAACAGATCCATAATACAGAAACTGAGTTAGCCAAAACTGAAGCTCTGATTAACATTCTCAAGTTCAAAGCCCAACAAGCTGAAAATGAATCAAATTTCCACGTCTTGCGCAGCACTGGGCAGTTTCAGTTTGGAAACCCTTCAAGCCAAGATTCTTGGTTCAAATGA 432 0.4213 MISGRCAACKNQRRKCPSDCIFSPYFPPNDPQRYAIVHRIYGGSNVGRMLQQIPPYVRAQAADCLHYEAQCRVQDPVYGCFGIISQLVQQIHNTETELAKTEALINILKFKAQQAENESNFHVLRSTGQFQFGNPSSQDSWFK. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07760 143 Coils Coil 84 118 - -
Seca7g07760 143 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 118 - -
Seca7g07760 143 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Seca7g07760 143 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07760 Seca-Chr7 181751106 181751991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07760 1 121 AS2 family AT3G26660 59.504 3.53e-49 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Seca7g07760 LOB 1.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07760 - - gmx:100790640 187.963