Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07749 ATGGATGGGGATCATAGCGATTTGGGTACTGTGCATGAAGGGAATGTTGATATTGGCCCTGACACATCGAATAACTTGGATTTGAATGTGGAGCAGAATTGTTGCAGCCCAAATATTGTTAATGCTAATTGCTCTCAGTCTGGTCTTCCATCAACAGATGTACCTAGCACCAATACAGTGTTGGGAATTGGTACTGAATTTGAGTCTGATGACCATGCATACAGATTCTATAATAGGTATGCCAGATTGGTGGGTTTCAATGTTAGAAAAGATTGGACAAATAGGAGTAAGGTACATGGTCAGGTAGTGTCTAGGAAATTTACCTGCTCCAAAGAGGGATACCGTAAGAAAGACAAAAGAGATGTTAATGTGAAGAAACATAGGAAGGAAACGAGAACTGGCTGCTTGGCACATATGATCGTCACTCGCCAACTGGATGGTAAATACAAGGTCACCCATTTTGAAGCTCAACATAATCATGACAATATAAACCCTATTCCTAGCAATGCTGAAATATTATTAAACTTGCAAACTGAATTTAGTGGTTCTCAAGCTGTGGAAGCTGACTCAAATAATAATTTGGGACCTAAATCAAGGTCAGCATTAAATATGATGCATAAAAAATTAGGCGCCCGTGATTATCTTGATCAAGTTTCCCTGAATTATGATAATTACCTTCATTCTGTAAGGGAAAGAGATATGAGAGAAGGAGAAGCAGGGCGTTTGCTGGGTTATTTCCAAAGGCAACACTTTGAAAATCCATCATTCTTTTATGCTATACAGGTTGATGTTGATGACAAGGTAAGCAATCTATTTTGTGCTGATGACAATATGGTGGTAGATTATGACCATTTTGGTGATGTCATTTGCTTGGATACAACTTGCAGAACAAACAAAGATCTTCGACCATTTGTACAGTTTTTAGGTGTAAATCATCACAAACAAGTCTTAATCTTTGCTGCTGCTTTTTTGTATGATGATACCATTGAATCATTTAATTGGCTATTCCGAACTTTCATTAATGCAATGTCTGGGAAAAAGCCAAAGGCCATCATCACAGAACAAGAAGCTGTAATCATCGAAGCAGTCAATAAGGTTTTACCTGAAACAAACCATTGTACATGTGTATGGCAGATGTATGAGAACACTTTGAAACACCTCAGCCATTTTGTCAAGGATGCTGAATCTTTTGCAAAGGATCTATGGAGCAGTATTTATGACCCCAAGGATGAGGAAGAATTTACTCACGCTTGGGAGGCTATGCTGGAGAAGTATAATCTCCAGAAAAATGAATGGTTGAAATGGATGTATAGAGAAAGAGAGAAATGGGCTGTTGTTTTTGGACGTAATACATTTTTTGTAGACCTCAAAGGCTTTCATTTAGGTGAGATTTTGTCTCACAAATTTAGAAGTTATCTAAATTCTGAACTTGATATAGTTCAATTTTTTAACCATTTTGAAAGCGTAGTAGATGAGCAACGTTACAAAGAAATAGAAGCTAGTGATGAAATGAGCAGGTGTTTGCCAAGGCTAATGGGTAATGTGGTTTTGTTGAAGCATGCAAGTGATGTTTATACTCCAAGAGCATTTGAAGTATTTCAGCGAGGATATGAAAAGTCTTTAAATGTTCTTGTTAACCAACACAATAGAAATGGATCATTGTTTGAGTATAAAGCAAATACATTTGGGCATACTAGACAATACAGTGTCACCTTCAATTCTTCAGATGATACAGTTGTCTGCAGTTGTATGAAGTTTGAGCATGTTGGATTTCTGTGTAGCCATGCTCTAAAAGTCCTTGACAACAGAAACATAAAAGTAGTTCCATCTCGGTATATCTTGAAGAGATGGACAAAAGATGCAAGGTTGGGAAATCTGAGGGAGATTAGCCAATGTAAAATGCAAGATAACCCTAAGATGGCTGTAGCAAGCTGTTACAAAGATTTGTGCCACAGACTTGTCAAGTTATCTGCAAGAGCCTCTGAATCTGTGGAGGCTTATCAATTTGCTGCAAGGCAACTTGATGAAGTGATGGAAGGAGTGGAGAAAATCTTGACATTGAAAGTTGAGGAAGCTCAAGTTATCACCCCAAGTAGTATTGATGTAAATGCTTCAGAAAGTGAGCCTGCAGAGATCTTTCTGAATGGACATGCAACTGAGGATCAGGATGAAAGTAACAGAGTAAATGGAGAAAAAGACAGGAGAGCTACACCAGCTAGGGGCCATCAAACAACTGTGAATTGTAATCGAACTGATTCTGATAGAATTTTAAATATAGAAGTATCTGCACCAAATACCGCTGCCTGCATTTCAAGCCCCTCATCTGCATATGTTTCATCTCAATCCGCAACACCAAATCCCATTACCCCAAATCCCATTTTGCAGGTCATCTTTTATCATTTATCAGATATGATAGCTTATATCGTTCTGATCATATACTCATGTCATTTATTTGCGGAGATCAACAAATATATTCTCATAACTTTTAAGAGAAAATGTTCTATAATTAAAAAAAAAGTTAAGAGAATATGA 2532 0.3748 MDGDHSDLGTVHEGNVDIGPDTSNNLDLNVEQNCCSPNIVNANCSQSGLPSTDVPSTNTVLGIGTEFESDDHAYRFYNRYARLVGFNVRKDWTNRSKVHGQVVSRKFTCSKEGYRKKDKRDVNVKKHRKETRTGCLAHMIVTRQLDGKYKVTHFEAQHNHDNINPIPSNAEILLNLQTEFSGSQAVEADSNNNLGPKSRSALNMMHKKLGARDYLDQVSLNYDNYLHSVRERDMREGEAGRLLGYFQRQHFENPSFFYAIQVDVDDKVSNLFCADDNMVVDYDHFGDVICLDTTCRTNKDLRPFVQFLGVNHHKQVLIFAAAFLYDDTIESFNWLFRTFINAMSGKKPKAIITEQEAVIIEAVNKVLPETNHCTCVWQMYENTLKHLSHFVKDAESFAKDLWSSIYDPKDEEEFTHAWEAMLEKYNLQKNEWLKWMYREREKWAVVFGRNTFFVDLKGFHLGEILSHKFRSYLNSELDIVQFFNHFESVVDEQRYKEIEASDEMSRCLPRLMGNVVLLKHASDVYTPRAFEVFQRGYEKSLNVLVNQHNRNGSLFEYKANTFGHTRQYSVTFNSSDDTVVCSCMKFEHVGFLCSHALKVLDNRNIKVVPSRYILKRWTKDARLGNLREISQCKMQDNPKMAVASCYKDLCHRLVKLSARASESVEAYQFAARQLDEVMEGVEKILTLKVEEAQVITPSSIDVNASESEPAEIFLNGHATEDQDESNRVNGEKDRRATPARGHQTTVNCNRTDSDRILNIEVSAPNTAACISSPSSAYVSSQSATPNPITPNPILQVIFYHLSDMIAYIVLIIYSCHLFAEINKYILITFKRKCSIIKKKVKRI. 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07749 843 Pfam FAR1 DNA-binding domain 75 161 IPR004330 -
Seca7g07749 843 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 683 IPR031052 GO:0006355
Seca7g07749 843 MobiDBLite consensus disorder prediction 714 743 - -
Seca7g07749 843 ProSiteProfiles Zinc finger SWIM-type profile. 568 604 IPR007527 GO:0008270
Seca7g07749 843 MobiDBLite consensus disorder prediction 717 739 - -
Seca7g07749 843 SMART 26again6 579 606 IPR006564 GO:0008270
Seca7g07749 843 Pfam MULE transposase domain 288 382 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07749 Seca-Chr7 181613563 181617548 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g07749 MULE 1.3e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07749 - K17604 gmx:100809803 1340.87