Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07748 ATGGGCTTTCTCCGCCGACTCTTCGGCACCAAAAAACCCTCTGACGGCTCACCTTCCAAATCTGACAAAAGAAGATGGAGCTTCGTCAAACACACCATCACAACCAAGTCACTCCCCCCTCCACCCTCCACTGCCGCCACTTCCTTGGACGCCAACAAACATGCCATAGCTGTCGCCGCCGCTACCGCTGCCGTTGCCGAGGCTGCTCTCGCCGCCGCCCACGCCGCCGCCGAGGTTGTCAGACTAACAAGCAGTGGCGTTGCTGGAAGCAGTACTAGAAGTAGGCCCACCGTGTCGGCGCCGCCGCCTGTTGGCCATCCGCGGTGGCCAGAGGAAACCGCCGCCGTTAAGATACAATCGGCGTTCCGTGGTTACTTGGCAAGGAGGGCATTGAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCATTGGTTAGGGGCCACATTGTGAGAAAGCAAACTGCAGATATGCTCAGACGCATGCAAACATTGGTGCGTCTGCAGGCCCGGGCACGTGCAAGTCGAGGGCACTTGTCAGATAATACGCGTTCTTTCAAGTCTTCACTTTCTCATTACCCTGTCCCTGAAGAATATGAACACCAACTCAGAGCCTACAGTACAAAATTGGATGGATCTTCTATCCTGAAGAGATGTAGTTCCAATGCAAATTTTAGGAACATTGACTCAGATAGAGCACGGTTTGGTTCCAATTGGTTAGACCGTTGGATGGAAGACAACACATGTAGCCAAACTAGAGATGCTTCATTGAAGAATGGACACCCAGATGATGAGAAAAGTGACAAGATTCTCGAAGTAGATACTTGGAAGCCACACTTCAAGTCTCACCACAGTAGCAGCTCTTTTCAGACAGCACATTGCTATATGAATTCTGATTATAATAATGACAACTTCATGACATATGAGTCTCCATCAAAACGTTCAACAAAAGCTCAAAATCAAAGTATCTCATCAAGAGAGGCTTTACTGCTAAGCTCTATGAAGTTCCAAAAAGGAAAAGAAGAAGCAACTTCACGAACTGCTGATAACAGTCCACAAGCATTTTCTGCCTCTTCTAGAACTGGAAGTAGTGCAAGGAGAGGTCCTTTTACACCTACAAGGAGTGAATGTTCATGGGGTTTCTTCAGTGGCTATGCTGGTTACCCCAATTACATGGCAAACACTGAATCTTCTCGAGCTAAGGTTAGATCACAGAGTGCACCAAGACAAAGGTTGGAGTTTGATAGATACAGTTCTAGTAGGAGACCTATTCATCATCATCTTCAGGGTATTTGGGATGTGGGGCCTAATTCAGACAGGGATTCTGATTCAAGGAGCAGAGTCTCAGCTGTCTCGAGTCGTTTGAACAGAATTGGGAGTACCAATTTAAGGTGA 1389 0.478 MGFLRRLFGTKKPSDGSPSKSDKRRWSFVKHTITTKSLPPPPSTAATSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSSGVAGSSTRSRPTVSAPPPVGHPRWPEETAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQARARASRGHLSDNTRSFKSSLSHYPVPEEYEHQLRAYSTKLDGSSILKRCSSNANFRNIDSDRARFGSNWLDRWMEDNTCSQTRDASLKNGHPDDEKSDKILEVDTWKPHFKSHHSSSSFQTAHCYMNSDYNNDNFMTYESPSKRSTKAQNQSISSREALLLSSMKFQKGKEEATSRTADNSPQAFSASSRTGSSARRGPFTPTRSECSWGFFSGYAGYPNYMANTESSRAKVRSQSAPRQRLEFDRYSSSRRPIHHHLQGIWDVGPNSDRDSDSRSRVSAVSSRLNRIGSTNLR. 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07748 462 Pfam Protein of unknown function (DUF4005) 349 410 IPR025064 -
Seca7g07748 462 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Seca7g07748 462 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 156 IPR027417 -
Seca7g07748 462 Gene3D - 111 163 - -
Seca7g07748 462 MobiDBLite consensus disorder prediction 404 426 - -
Seca7g07748 462 MobiDBLite consensus disorder prediction 335 370 - -
Seca7g07748 462 Pfam IQ calmodulin-binding motif 114 132 IPR000048 GO:0005515
Seca7g07748 462 Pfam IQ calmodulin-binding motif 135 152 IPR000048 GO:0005515
Seca7g07748 462 PANTHER IQ-DOMAIN 5-RELATED 14 432 - -
Seca7g07748 462 SMART iq_5 110 132 IPR000048 GO:0005515
Seca7g07748 462 SMART iq_5 133 154 IPR000048 GO:0005515
Seca7g07748 462 MobiDBLite consensus disorder prediction 344 369 - -
Seca7g07748 462 MobiDBLite consensus disorder prediction 85 109 - -
Seca7g07748 462 MobiDBLite consensus disorder prediction 446 462 - -
Seca7g07748 462 MobiDBLite consensus disorder prediction 1 25 - -
Seca7g07748 462 MobiDBLite consensus disorder prediction 397 462 - -
Seca7g07748 462 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07748 Seca-Chr7 181604948 181609570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07748 1 411 IQD Protein Family AT5G62070 47.981 2.17e-70 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07748 - - gmx:100783694 553.903