Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07744 ATGGCTTTTCCCTTCAACCTTGTACTCTCGTACCTTGTCATGTTCCACCTCTGGTTCTCCATTGCAGATGACAATGGACAAAACCCAGAAAAAATTTCCCTCCTTTCCTTCAAAGAAGCTCTCCAAAACCCTCACGTTTTAGCTTCATGGCACTCTGCAACCCCGCACTGCGACTGGGTTGGCGTCACTTGCCAACTCGGCCGAGTCACCTCGCTCTCTCTTCCTTCTCGCTACCTCAGAGGAACACTCTCTTTGTCTCTCTCCTCTCTTTCCTCTCTGACCGTCCTCAACCTCGATGACAATCAGTTTTCCGGCGAAATCCCCGGCGAACTCGGTGAGTTGGTTCAGCTGCAAACTCTCAGACTCGGTTCCAACTCGTTCGCCGGAAAAATACCACCGGAGTTGGGACTCTTGACAAACTTGCGCACACTCGACCTCGCCGGCAATGCCCTTGCCGGAGAGATACCGGAGAGTATCGGAAACTTGACCCAGCTCCAGTTCTTGGACTTGAGCAACAACTTTCTCTCAGGTTCTCTTCCGATAACTCTCTTCACCGGAACTCAGTCTTTGATCTCTGTTGATATCTCGAACAACTCGTTTTCCGGTGCACTGCCGCCGGAAATCGGGAACTGGAAGAACCTCACTGCACTTTACGTTGGGATTAACAAGTTGTCAGGTACACTGCCTAAGGAAATTGGAGAGCTTTCGAAGCTTGAAATCTTCTATTCCCCTTCCTGTTTTATTGAAGGTCCATTGCCCGAGGAAATGGCAAAGCTCGAATCGTTGACAAAGCTTGACCTTTCTTACAACCCCTTGAGGTGTTCAATCCCAAAGTTTATTGGGAAGTTGCAAAATTTGAAAATATTGGACCTTGTCTTTGCTCAGCTTAATGGGTCAGTGCCAGCTGAGCTTGGAAATTGTAAAACCCTGAGGTCTGTGATGCTTTCTTTCAATTCACTTTCTGGGTCACTGCCTGAGGAGCTTTCTGAGCTCCCCATAATCACTTTTTCAGCTGAAAAGAATCAGCTCCATGGACCTTTGCCTTCTTGGCTTGGGAAGTGGACTAATGTTGATTCTCTCTTGCTCTCTGCCAACCGTTTTTCTGGGGTGATTCCACCTGAGCTTGGGAATTGCTCTGTGATGCAGCATCTTAGTTTGAGCAGCAACTTGTTAACAGGTCCTATACCTGAGGAGCTTTGTAATGCTGCCTCTCTTTTGGAGATTGATCTTGATGATAACTTCCTTTCTGGTACAATTGAGAAAGCTTTTGTCAAGTGTAAGAACCTTACCCAGTTGGTTTTGATGAACAATCAGATTGTTGGTTCTATTCCACAGTACCTTTCAGAGCTTCCCTTGATGGTGCTGGACCTAGACTCCAACAACTTTAGTGGAAAAATACCTTCTAGTCTCTGGAATTCTTCCTCACTGATGGAATTCTCTGCTGCCAATAACCGTTTGGAGGGTTCTCTTCCTGTGGAGATAGGGAATGCAGTTGTTCTACAGAGGCTTGTTGTTAGCAATAATCGATTGACAGGTACTATACCTAAGGAAATTGGAAGTCTCACAAGTCTTTCAGTTCTTAATTTGAATGGAAATATGCTTGAAGGCAATATTCCAACTGAGCTTGGTCAGTGCATTTCCCTTACTACATTGGACCTTGGAAACAATCGACTCAATGGTTCTATTCCTGAGAAACTGGTGGACCTAAGCCAATTACAGTGCCTAGTTCTTTCTCACAATAATCTCTCTGGGTCTATTCCTACCAAGAACCAATCTTCATATTTTCGACAACTTACCATCCCTGATTTGAGCTTTGTTCAACACCTTGGTGTATTTGATCTTTCTCACAATAGATTGTCTGGCACCATACCTCATGAACTGGGGAGCTGTGTAGTGGTTGTGGATCTATTACTCAGCAACAACTTGCTTTCTGGGAGCATTCCAAGATCACTCTCACGCTTGACAAATCTAACAACTTTGGATTTGTCTAGCAACTTGTTATCAGGTTTCATTCCACCAGAGCTTGGAGATGCACTCAAACTTCAAGGTTTATATCTGGGACAGAATAAACTCTCAGGTACCATCCCTGCAAGTTTTGGAAATCTGAGTAGTTTGGTGAAGCTGAATTTGACAGGAAATAAGTTGTCTGGTCCAATTCCAAATAGTTTTGGGAACATGAAGGAGTTGACTCACTTGGACTTAAGCTCTAATGAGCTCAGTGGTGAGCTTCCATCTTCTCTGTCAGGTGTGCAAAGCCTTGTGGGGCTTTACGCACAGAAGAACAGACTTTCTGGCCAAGTAGGGGAGCTCTTCTCAAATTCCATGACATGGAGGATTGAGACAATGAATTTGAGTGATAATTGTTTCACTGGTAACTTGCCACGGTCTTTGGGAAATCTTTCCTATTTGACAAATTTGGATCTTCATCAAAATTTGTTGAGTGGAGAGATTCCTTTAGACCTTGGGAATCTAATGCAATTGGAGTATTTTGATGTTTCAGGTAATCACCTATCTGGAAAGATCCCAGAGAAGTTATGCAGCCTTGTTAATCTAAATTACTTAGATTTGTCTCAAAACAGATTGGAAGGGCCTATACCTAGAAGTGGTATTTGCCAGAACCTATCCAGAGCTAGATTTTTGGGGAATAGAAATCTTTGTGGCCAGAATTTGGGTATAAATTGTCAGATCAAAAGCATTGATAGAACTGCATTGTTTAATGTATGGAGGCTTGCTGGAATTGCCATTACAATCATATTAATTACTATAAGCATTGCTTTTGTTCTGCATAGATGGATTATCAGGAGGCAAAATGATCCAGAGGAACTTGAGGAGCGCAAACTAAACAGTTATGTGGATCAAAATCTTTATTTCTTGAGTAGTAGCAGATCAAAGGAACCTTTGAGTATCAATGTAGCAATGTTTGAACAGCCTCTTCTGAAATTAACCTTGGTTGACATCCTTGAAGCTACAGACAACTTCAGCAAGGCAAATATAATTGGAGATGGAGGTTTTGGAACTGTGTACAAGGCCACTCTTCCTAATGGAAAAACAGTTGCTGTAAAGAAGCTTAGTGAAGCTAAAACACAGGGTCATCGTGAGTTCATGGCTGAAATGGAAACCTTGGGCAAGGTGAAGCATCAAAACCTTGTTGCATTGCTTGGATATTGCTCATTGGGTGAAGAGAAACTCCTTGTTTATGAATACATGGTAAATGGGAGCTTAGACCTTTGGTTGAGAAACAGAACTGGGGCCCTTGAAATCCTTGACTGGAACAAACGTTACAAGATTGCAACTGGTGCAGCTCGAGGACTAGCTTTCCTTCATCATGGTTTCATACCCCACATCATTCACAGGGATGTTAAAGCTAGCAACATTTTACTGAATGAAGATTTTGAGCCAAAAGTTGCTGACTTTGGACTTGCAAGATTGATCAGTGCCTGTGAGACACATATCACCACTGATGTAGCTGGAACATTTGGTTACATTCCACCAGAGTATGGGCAGAGTGGGAGGTCCACAACAAGAGGAGATGTGTACAGTTTTGGTGTCATTTTGCTTGAATTGGTGACAGGAAAAGAGCCAACTGGACCAGATTTCAAAGAGATTGAAGGTGGGAACTTGGTTGGATGGGTTAGTCAGAAGATCAAGAAGGGGCAAGCTGCTGATGTTCTTGATCCAACAGTTCTTGATGCAGATTCAAAGCAGATGATGCTTCAAATGCTGCAGATTGCTTGTGTATGTCTCTCTGATAATCCTGCAAACAGGCCTACCATGCTTCAAGTTCACAAATTCTTGAAGGGGATTAAAGGAGGAGAGTAG 3819 0.4323 MAFPFNLVLSYLVMFHLWFSIADDNGQNPEKISLLSFKEALQNPHVLASWHSATPHCDWVGVTCQLGRVTSLSLPSRYLRGTLSLSLSSLSSLTVLNLDDNQFSGEIPGELGELVQLQTLRLGSNSFAGKIPPELGLLTNLRTLDLAGNALAGEIPESIGNLTQLQFLDLSNNFLSGSLPITLFTGTQSLISVDISNNSFSGALPPEIGNWKNLTALYVGINKLSGTLPKEIGELSKLEIFYSPSCFIEGPLPEEMAKLESLTKLDLSYNPLRCSIPKFIGKLQNLKILDLVFAQLNGSVPAELGNCKTLRSVMLSFNSLSGSLPEELSELPIITFSAEKNQLHGPLPSWLGKWTNVDSLLLSANRFSGVIPPELGNCSVMQHLSLSSNLLTGPIPEELCNAASLLEIDLDDNFLSGTIEKAFVKCKNLTQLVLMNNQIVGSIPQYLSELPLMVLDLDSNNFSGKIPSSLWNSSSLMEFSAANNRLEGSLPVEIGNAVVLQRLVVSNNRLTGTIPKEIGSLTSLSVLNLNGNMLEGNIPTELGQCISLTTLDLGNNRLNGSIPEKLVDLSQLQCLVLSHNNLSGSIPTKNQSSYFRQLTIPDLSFVQHLGVFDLSHNRLSGTIPHELGSCVVVVDLLLSNNLLSGSIPRSLSRLTNLTTLDLSSNLLSGFIPPELGDALKLQGLYLGQNKLSGTIPASFGNLSSLVKLNLTGNKLSGPIPNSFGNMKELTHLDLSSNELSGELPSSLSGVQSLVGLYAQKNRLSGQVGELFSNSMTWRIETMNLSDNCFTGNLPRSLGNLSYLTNLDLHQNLLSGEIPLDLGNLMQLEYFDVSGNHLSGKIPEKLCSLVNLNYLDLSQNRLEGPIPRSGICQNLSRARFLGNRNLCGQNLGINCQIKSIDRTALFNVWRLAGIAITIILITISIAFVLHRWIIRRQNDPEELEERKLNSYVDQNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILEATDNFSKANIIGDGGFGTVYKATLPNGKTVAVKKLSEAKTQGHREFMAEMETLGKVKHQNLVALLGYCSLGEEKLLVYEYMVNGSLDLWLRNRTGALEILDWNKRYKIATGAARGLAFLHHGFIPHIIHRDVKASNILLNEDFEPKVADFGLARLISACETHITTDVAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVSQKIKKGQAADVLDPTVLDADSKQMMLQMLQIACVCLSDNPANRPTMLQVHKFLKGIKGGE. 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07744 1272 FunFam serine/threonine-protein kinase BRI1-like 2 1069 1272 - -
Seca7g07744 1272 Pfam Leucine rich repeat 655 715 IPR001611 GO:0005515
Seca7g07744 1272 SMART LRR_typ_2 138 161 IPR003591 -
Seca7g07744 1272 SMART LRR_typ_2 848 873 IPR003591 -
Seca7g07744 1272 SMART LRR_typ_2 726 750 IPR003591 -
Seca7g07744 1272 SMART LRR_typ_2 606 630 IPR003591 -
Seca7g07744 1272 SMART LRR_typ_2 90 114 IPR003591 -
Seca7g07744 1272 SMART LRR_typ_2 654 678 IPR003591 -
Seca7g07744 1272 SMART LRR_typ_2 521 545 IPR003591 -
Seca7g07744 1272 SMART LRR_typ_2 702 725 IPR003591 -
Seca7g07744 1272 SMART LRR_typ_2 569 592 IPR003591 -
Seca7g07744 1272 SMART LRR_typ_2 162 186 IPR003591 -
Seca7g07744 1272 SMART LRR_typ_2 259 283 IPR003591 -
Seca7g07744 1272 Gene3D Ribonuclease Inhibitor 335 597 IPR032675 -
Seca7g07744 1272 Gene3D Ribonuclease Inhibitor 598 897 IPR032675 -
Seca7g07744 1272 Gene3D Ribonuclease Inhibitor 185 334 IPR032675 -
Seca7g07744 1272 SUPERFAMILY L domain-like 595 890 - -
Seca7g07744 1272 Gene3D Phosphorylase Kinase; domain 1 955 1068 - -
Seca7g07744 1272 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 602 898 - -
Seca7g07744 1272 SUPERFAMILY Protein kinase-like (PK-like) 974 1265 IPR011009 -
Seca7g07744 1272 SMART LRR_sd22_2 211 237 - -
Seca7g07744 1272 SMART LRR_sd22_2 726 752 - -
Seca7g07744 1272 SMART LRR_sd22_2 800 821 - -
Seca7g07744 1272 SMART LRR_sd22_2 848 876 - -
Seca7g07744 1272 SMART LRR_sd22_2 654 675 - -
Seca7g07744 1272 SMART LRR_sd22_2 678 704 - -
Seca7g07744 1272 SMART LRR_sd22_2 138 164 - -
Seca7g07744 1272 SMART LRR_sd22_2 545 571 - -
Seca7g07744 1272 PANTHER OS04G0122200 PROTEIN 643 1252 - -
Seca7g07744 1272 FunFam leucine-rich repeat receptor protein kinase EMS1 185 335 - -
Seca7g07744 1272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1115 1127 IPR008271 GO:0004672|GO:0006468
Seca7g07744 1272 SMART serkin_6 993 1265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07744 1272 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 27 180 - -
Seca7g07744 1272 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Seca7g07744 1272 PRINTS Leucine-rich repeat signature 729 742 - -
Seca7g07744 1272 PRINTS Leucine-rich repeat signature 848 861 - -
Seca7g07744 1272 Pfam Leucine Rich Repeat 261 283 IPR001611 GO:0005515
Seca7g07744 1272 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515
Seca7g07744 1272 Pfam Leucine Rich Repeat 729 749 IPR001611 GO:0005515
Seca7g07744 1272 FunFam Leucine-rich repeat receptor protein kinase EMS1 336 595 - -
Seca7g07744 1272 ProSiteProfiles Protein kinase domain profile. 993 1265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07744 1272 FunFam serine/threonine-protein kinase BRI1-like 2 954 1068 - -
Seca7g07744 1272 ProSitePatterns Protein kinases ATP-binding region signature. 999 1022 IPR017441 GO:0005524
Seca7g07744 1272 SUPERFAMILY RNI-like 344 594 - -
Seca7g07744 1272 SUPERFAMILY L domain-like 45 334 - -
Seca7g07744 1272 Pfam Protein tyrosine and serine/threonine kinase 996 1265 IPR001245 GO:0004672|GO:0006468
Seca7g07744 1272 Gene3D Transferase(Phosphotransferase) domain 1 1069 1271 - -
Seca7g07744 1272 Gene3D Ribonuclease Inhibitor 27 184 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07744 Seca-Chr7 181479650 181483468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07744 30 1268 Receptor kinase-like Gene Family AT5G07280 55.341 0.0 1269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Seca7g07744 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07744 - - gmx:100780446 2133.99