Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g07744 | ATGGCTTTTCCCTTCAACCTTGTACTCTCGTACCTTGTCATGTTCCACCTCTGGTTCTCCATTGCAGATGACAATGGACAAAACCCAGAAAAAATTTCCCTCCTTTCCTTCAAAGAAGCTCTCCAAAACCCTCACGTTTTAGCTTCATGGCACTCTGCAACCCCGCACTGCGACTGGGTTGGCGTCACTTGCCAACTCGGCCGAGTCACCTCGCTCTCTCTTCCTTCTCGCTACCTCAGAGGAACACTCTCTTTGTCTCTCTCCTCTCTTTCCTCTCTGACCGTCCTCAACCTCGATGACAATCAGTTTTCCGGCGAAATCCCCGGCGAACTCGGTGAGTTGGTTCAGCTGCAAACTCTCAGACTCGGTTCCAACTCGTTCGCCGGAAAAATACCACCGGAGTTGGGACTCTTGACAAACTTGCGCACACTCGACCTCGCCGGCAATGCCCTTGCCGGAGAGATACCGGAGAGTATCGGAAACTTGACCCAGCTCCAGTTCTTGGACTTGAGCAACAACTTTCTCTCAGGTTCTCTTCCGATAACTCTCTTCACCGGAACTCAGTCTTTGATCTCTGTTGATATCTCGAACAACTCGTTTTCCGGTGCACTGCCGCCGGAAATCGGGAACTGGAAGAACCTCACTGCACTTTACGTTGGGATTAACAAGTTGTCAGGTACACTGCCTAAGGAAATTGGAGAGCTTTCGAAGCTTGAAATCTTCTATTCCCCTTCCTGTTTTATTGAAGGTCCATTGCCCGAGGAAATGGCAAAGCTCGAATCGTTGACAAAGCTTGACCTTTCTTACAACCCCTTGAGGTGTTCAATCCCAAAGTTTATTGGGAAGTTGCAAAATTTGAAAATATTGGACCTTGTCTTTGCTCAGCTTAATGGGTCAGTGCCAGCTGAGCTTGGAAATTGTAAAACCCTGAGGTCTGTGATGCTTTCTTTCAATTCACTTTCTGGGTCACTGCCTGAGGAGCTTTCTGAGCTCCCCATAATCACTTTTTCAGCTGAAAAGAATCAGCTCCATGGACCTTTGCCTTCTTGGCTTGGGAAGTGGACTAATGTTGATTCTCTCTTGCTCTCTGCCAACCGTTTTTCTGGGGTGATTCCACCTGAGCTTGGGAATTGCTCTGTGATGCAGCATCTTAGTTTGAGCAGCAACTTGTTAACAGGTCCTATACCTGAGGAGCTTTGTAATGCTGCCTCTCTTTTGGAGATTGATCTTGATGATAACTTCCTTTCTGGTACAATTGAGAAAGCTTTTGTCAAGTGTAAGAACCTTACCCAGTTGGTTTTGATGAACAATCAGATTGTTGGTTCTATTCCACAGTACCTTTCAGAGCTTCCCTTGATGGTGCTGGACCTAGACTCCAACAACTTTAGTGGAAAAATACCTTCTAGTCTCTGGAATTCTTCCTCACTGATGGAATTCTCTGCTGCCAATAACCGTTTGGAGGGTTCTCTTCCTGTGGAGATAGGGAATGCAGTTGTTCTACAGAGGCTTGTTGTTAGCAATAATCGATTGACAGGTACTATACCTAAGGAAATTGGAAGTCTCACAAGTCTTTCAGTTCTTAATTTGAATGGAAATATGCTTGAAGGCAATATTCCAACTGAGCTTGGTCAGTGCATTTCCCTTACTACATTGGACCTTGGAAACAATCGACTCAATGGTTCTATTCCTGAGAAACTGGTGGACCTAAGCCAATTACAGTGCCTAGTTCTTTCTCACAATAATCTCTCTGGGTCTATTCCTACCAAGAACCAATCTTCATATTTTCGACAACTTACCATCCCTGATTTGAGCTTTGTTCAACACCTTGGTGTATTTGATCTTTCTCACAATAGATTGTCTGGCACCATACCTCATGAACTGGGGAGCTGTGTAGTGGTTGTGGATCTATTACTCAGCAACAACTTGCTTTCTGGGAGCATTCCAAGATCACTCTCACGCTTGACAAATCTAACAACTTTGGATTTGTCTAGCAACTTGTTATCAGGTTTCATTCCACCAGAGCTTGGAGATGCACTCAAACTTCAAGGTTTATATCTGGGACAGAATAAACTCTCAGGTACCATCCCTGCAAGTTTTGGAAATCTGAGTAGTTTGGTGAAGCTGAATTTGACAGGAAATAAGTTGTCTGGTCCAATTCCAAATAGTTTTGGGAACATGAAGGAGTTGACTCACTTGGACTTAAGCTCTAATGAGCTCAGTGGTGAGCTTCCATCTTCTCTGTCAGGTGTGCAAAGCCTTGTGGGGCTTTACGCACAGAAGAACAGACTTTCTGGCCAAGTAGGGGAGCTCTTCTCAAATTCCATGACATGGAGGATTGAGACAATGAATTTGAGTGATAATTGTTTCACTGGTAACTTGCCACGGTCTTTGGGAAATCTTTCCTATTTGACAAATTTGGATCTTCATCAAAATTTGTTGAGTGGAGAGATTCCTTTAGACCTTGGGAATCTAATGCAATTGGAGTATTTTGATGTTTCAGGTAATCACCTATCTGGAAAGATCCCAGAGAAGTTATGCAGCCTTGTTAATCTAAATTACTTAGATTTGTCTCAAAACAGATTGGAAGGGCCTATACCTAGAAGTGGTATTTGCCAGAACCTATCCAGAGCTAGATTTTTGGGGAATAGAAATCTTTGTGGCCAGAATTTGGGTATAAATTGTCAGATCAAAAGCATTGATAGAACTGCATTGTTTAATGTATGGAGGCTTGCTGGAATTGCCATTACAATCATATTAATTACTATAAGCATTGCTTTTGTTCTGCATAGATGGATTATCAGGAGGCAAAATGATCCAGAGGAACTTGAGGAGCGCAAACTAAACAGTTATGTGGATCAAAATCTTTATTTCTTGAGTAGTAGCAGATCAAAGGAACCTTTGAGTATCAATGTAGCAATGTTTGAACAGCCTCTTCTGAAATTAACCTTGGTTGACATCCTTGAAGCTACAGACAACTTCAGCAAGGCAAATATAATTGGAGATGGAGGTTTTGGAACTGTGTACAAGGCCACTCTTCCTAATGGAAAAACAGTTGCTGTAAAGAAGCTTAGTGAAGCTAAAACACAGGGTCATCGTGAGTTCATGGCTGAAATGGAAACCTTGGGCAAGGTGAAGCATCAAAACCTTGTTGCATTGCTTGGATATTGCTCATTGGGTGAAGAGAAACTCCTTGTTTATGAATACATGGTAAATGGGAGCTTAGACCTTTGGTTGAGAAACAGAACTGGGGCCCTTGAAATCCTTGACTGGAACAAACGTTACAAGATTGCAACTGGTGCAGCTCGAGGACTAGCTTTCCTTCATCATGGTTTCATACCCCACATCATTCACAGGGATGTTAAAGCTAGCAACATTTTACTGAATGAAGATTTTGAGCCAAAAGTTGCTGACTTTGGACTTGCAAGATTGATCAGTGCCTGTGAGACACATATCACCACTGATGTAGCTGGAACATTTGGTTACATTCCACCAGAGTATGGGCAGAGTGGGAGGTCCACAACAAGAGGAGATGTGTACAGTTTTGGTGTCATTTTGCTTGAATTGGTGACAGGAAAAGAGCCAACTGGACCAGATTTCAAAGAGATTGAAGGTGGGAACTTGGTTGGATGGGTTAGTCAGAAGATCAAGAAGGGGCAAGCTGCTGATGTTCTTGATCCAACAGTTCTTGATGCAGATTCAAAGCAGATGATGCTTCAAATGCTGCAGATTGCTTGTGTATGTCTCTCTGATAATCCTGCAAACAGGCCTACCATGCTTCAAGTTCACAAATTCTTGAAGGGGATTAAAGGAGGAGAGTAG | 3819 | 0.4323 | MAFPFNLVLSYLVMFHLWFSIADDNGQNPEKISLLSFKEALQNPHVLASWHSATPHCDWVGVTCQLGRVTSLSLPSRYLRGTLSLSLSSLSSLTVLNLDDNQFSGEIPGELGELVQLQTLRLGSNSFAGKIPPELGLLTNLRTLDLAGNALAGEIPESIGNLTQLQFLDLSNNFLSGSLPITLFTGTQSLISVDISNNSFSGALPPEIGNWKNLTALYVGINKLSGTLPKEIGELSKLEIFYSPSCFIEGPLPEEMAKLESLTKLDLSYNPLRCSIPKFIGKLQNLKILDLVFAQLNGSVPAELGNCKTLRSVMLSFNSLSGSLPEELSELPIITFSAEKNQLHGPLPSWLGKWTNVDSLLLSANRFSGVIPPELGNCSVMQHLSLSSNLLTGPIPEELCNAASLLEIDLDDNFLSGTIEKAFVKCKNLTQLVLMNNQIVGSIPQYLSELPLMVLDLDSNNFSGKIPSSLWNSSSLMEFSAANNRLEGSLPVEIGNAVVLQRLVVSNNRLTGTIPKEIGSLTSLSVLNLNGNMLEGNIPTELGQCISLTTLDLGNNRLNGSIPEKLVDLSQLQCLVLSHNNLSGSIPTKNQSSYFRQLTIPDLSFVQHLGVFDLSHNRLSGTIPHELGSCVVVVDLLLSNNLLSGSIPRSLSRLTNLTTLDLSSNLLSGFIPPELGDALKLQGLYLGQNKLSGTIPASFGNLSSLVKLNLTGNKLSGPIPNSFGNMKELTHLDLSSNELSGELPSSLSGVQSLVGLYAQKNRLSGQVGELFSNSMTWRIETMNLSDNCFTGNLPRSLGNLSYLTNLDLHQNLLSGEIPLDLGNLMQLEYFDVSGNHLSGKIPEKLCSLVNLNYLDLSQNRLEGPIPRSGICQNLSRARFLGNRNLCGQNLGINCQIKSIDRTALFNVWRLAGIAITIILITISIAFVLHRWIIRRQNDPEELEERKLNSYVDQNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILEATDNFSKANIIGDGGFGTVYKATLPNGKTVAVKKLSEAKTQGHREFMAEMETLGKVKHQNLVALLGYCSLGEEKLLVYEYMVNGSLDLWLRNRTGALEILDWNKRYKIATGAARGLAFLHHGFIPHIIHRDVKASNILLNEDFEPKVADFGLARLISACETHITTDVAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVSQKIKKGQAADVLDPTVLDADSKQMMLQMLQIACVCLSDNPANRPTMLQVHKFLKGIKGGE. | 1273 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g07744 | 1272 | FunFam | serine/threonine-protein kinase BRI1-like 2 | 1069 | 1272 | - | - | |
Seca7g07744 | 1272 | Pfam | Leucine rich repeat | 655 | 715 | IPR001611 | GO:0005515 | |
Seca7g07744 | 1272 | SMART | LRR_typ_2 | 138 | 161 | IPR003591 | - | |
Seca7g07744 | 1272 | SMART | LRR_typ_2 | 848 | 873 | IPR003591 | - | |
Seca7g07744 | 1272 | SMART | LRR_typ_2 | 726 | 750 | IPR003591 | - | |
Seca7g07744 | 1272 | SMART | LRR_typ_2 | 606 | 630 | IPR003591 | - | |
Seca7g07744 | 1272 | SMART | LRR_typ_2 | 90 | 114 | IPR003591 | - | |
Seca7g07744 | 1272 | SMART | LRR_typ_2 | 654 | 678 | IPR003591 | - | |
Seca7g07744 | 1272 | SMART | LRR_typ_2 | 521 | 545 | IPR003591 | - | |
Seca7g07744 | 1272 | SMART | LRR_typ_2 | 702 | 725 | IPR003591 | - | |
Seca7g07744 | 1272 | SMART | LRR_typ_2 | 569 | 592 | IPR003591 | - | |
Seca7g07744 | 1272 | SMART | LRR_typ_2 | 162 | 186 | IPR003591 | - | |
Seca7g07744 | 1272 | SMART | LRR_typ_2 | 259 | 283 | IPR003591 | - | |
Seca7g07744 | 1272 | Gene3D | Ribonuclease Inhibitor | 335 | 597 | IPR032675 | - | |
Seca7g07744 | 1272 | Gene3D | Ribonuclease Inhibitor | 598 | 897 | IPR032675 | - | |
Seca7g07744 | 1272 | Gene3D | Ribonuclease Inhibitor | 185 | 334 | IPR032675 | - | |
Seca7g07744 | 1272 | SUPERFAMILY | L domain-like | 595 | 890 | - | - | |
Seca7g07744 | 1272 | Gene3D | Phosphorylase Kinase; domain 1 | 955 | 1068 | - | - | |
Seca7g07744 | 1272 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 602 | 898 | - | - | |
Seca7g07744 | 1272 | SUPERFAMILY | Protein kinase-like (PK-like) | 974 | 1265 | IPR011009 | - | |
Seca7g07744 | 1272 | SMART | LRR_sd22_2 | 211 | 237 | - | - | |
Seca7g07744 | 1272 | SMART | LRR_sd22_2 | 726 | 752 | - | - | |
Seca7g07744 | 1272 | SMART | LRR_sd22_2 | 800 | 821 | - | - | |
Seca7g07744 | 1272 | SMART | LRR_sd22_2 | 848 | 876 | - | - | |
Seca7g07744 | 1272 | SMART | LRR_sd22_2 | 654 | 675 | - | - | |
Seca7g07744 | 1272 | SMART | LRR_sd22_2 | 678 | 704 | - | - | |
Seca7g07744 | 1272 | SMART | LRR_sd22_2 | 138 | 164 | - | - | |
Seca7g07744 | 1272 | SMART | LRR_sd22_2 | 545 | 571 | - | - | |
Seca7g07744 | 1272 | PANTHER | OS04G0122200 PROTEIN | 643 | 1252 | - | - | |
Seca7g07744 | 1272 | FunFam | leucine-rich repeat receptor protein kinase EMS1 | 185 | 335 | - | - | |
Seca7g07744 | 1272 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1115 | 1127 | IPR008271 | GO:0004672|GO:0006468 | |
Seca7g07744 | 1272 | SMART | serkin_6 | 993 | 1265 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g07744 | 1272 | FunFam | LRR receptor-like serine/threonine-protein kinase FLS2 | 27 | 180 | - | - | |
Seca7g07744 | 1272 | Pfam | Leucine rich repeat N-terminal domain | 28 | 64 | IPR013210 | - | |
Seca7g07744 | 1272 | PRINTS | Leucine-rich repeat signature | 729 | 742 | - | - | |
Seca7g07744 | 1272 | PRINTS | Leucine-rich repeat signature | 848 | 861 | - | - | |
Seca7g07744 | 1272 | Pfam | Leucine Rich Repeat | 261 | 283 | IPR001611 | GO:0005515 | |
Seca7g07744 | 1272 | Pfam | Leucine Rich Repeat | 140 | 162 | IPR001611 | GO:0005515 | |
Seca7g07744 | 1272 | Pfam | Leucine Rich Repeat | 729 | 749 | IPR001611 | GO:0005515 | |
Seca7g07744 | 1272 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 336 | 595 | - | - | |
Seca7g07744 | 1272 | ProSiteProfiles | Protein kinase domain profile. | 993 | 1265 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g07744 | 1272 | FunFam | serine/threonine-protein kinase BRI1-like 2 | 954 | 1068 | - | - | |
Seca7g07744 | 1272 | ProSitePatterns | Protein kinases ATP-binding region signature. | 999 | 1022 | IPR017441 | GO:0005524 | |
Seca7g07744 | 1272 | SUPERFAMILY | RNI-like | 344 | 594 | - | - | |
Seca7g07744 | 1272 | SUPERFAMILY | L domain-like | 45 | 334 | - | - | |
Seca7g07744 | 1272 | Pfam | Protein tyrosine and serine/threonine kinase | 996 | 1265 | IPR001245 | GO:0004672|GO:0006468 | |
Seca7g07744 | 1272 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1069 | 1271 | - | - | |
Seca7g07744 | 1272 | Gene3D | Ribonuclease Inhibitor | 27 | 184 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g07744 | Seca-Chr7 | 181479650 | 181483468 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g07744 | 30 | 1268 | Receptor kinase-like Gene Family | AT5G07280 | 55.341 | 0.0 | 1269 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-1 | Seca7g07744 | PK_Tyr_Ser-Thr | 1.2e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g07744 | - | - | gmx:100780446 | 2133.99 |