Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07707 ATGGAGTTTCTAGGGCTATTTGGGGTTGTTGTTGCCATCTTGGCAGCACTTTGCCTCTTGATACTAACGTTTTGTTGGTGTTTCATCCCAATCCAAACATATAAGAAGCTTAAAAGATGTGGTTTTGGAGGGCCAACCCCAAGTTTTCCACTTGGAAACATTAAAGAGATGATCAAAAGAGAGAATATTAATATCATTAAATCTTCAGTTGTATCCCCAAATCTCTCGCATGATATTCACTCATACGTTTTTCCATACTTTTCTAGCTGGCAGAAATCACATGGTAAGGTGTTTGTTTACTGGCTTGGAACGGAGCCATTTTTGTACATTGGAGAGGCAGAGTTTTTGAAGAAGATGTCAACAGAAGTGATGGCAAAGAGATGGGGAAAGCCAAGTGTGTTTAGAAATGATAGAGACCCAATGTTTGGGAGTGGTTTGGTGATGGTTGAGGGAAACGATTGGGTTCGTCACCGTCACATTGTTTCCCCCGCATTCAATCCTATTAACCTCAAGGTCATGGCAAGCAGGATGGTTGAGTCTACGAGTCAAATGATAGGAAGATGGACAACCTTAATAAACAATGGAAACCCCGAAATCGACGTGGAGAGAGAGATTATAGCAACAGCTGGTGAGATCATAGCAAAAACAAGTTTTGGGATGGAAGATGAGAATGCTAGAGAGGTTTTTGACAAATTAAGAGCCTTGCAAATGACTCTCTTCAAGACCAATAGGTATGTTGGGGTTCCCTTTGGCAAGTATTTCAATGTGAAGAAAACACTAGAGGCCAAGAAACTTGGAAAAGAAATCGACCAGCTCTTGTCTTCCATCATTGAAGCTCGTAAGAAATCACCAAAAATGAATTCTCAACAAGATTTATTAGGTTTAATGCTGAAAGATAATTCAGGCAAGACACTAACAACACGAGAAGTGATCGATGAATGTAAGACTTTCTTTTTTGGCGGTCATGAAACGACAGCACTTGCTATCACATGGACTTTGCTACTCTTAGCTATACATCAAGATTGGCAAAACCAACTGAGGGATGAGATCAAAGAAGTGGTGGGAAACAACGAGCTTGATATCACTATGCTTGCTGGTTTGAAGAAGATGAAGTGTGTGATGAATGAAGTTTTAAGACTATACCCACCGGCACCAAATGTGCAAAGACAAGCAAGAGAAGACATTCAAGTGGATGATTTTACAGTGCCTAATGGAACCAATATGTGGATTGATGTGGTAGCGATGCACCATGACCCTGAATTATGGGGAAATGATGTGAATGAGTTCAAGCCAGAGAGGTTCATGGATGATGTGAATGGTGGATGCAACCATAAGATGGGGTACTTGCCATTTGGGTTTGGAGGGAGGATGTGTGTTGGTAGGAATTTGACATTCATGGAGTATAAGATTGTATTAACACTACTTCTCTCTAGGTTCACTTTTAAGGTTTCCCCAGGTTACCATCATTCACCATCTATCATGCTCTCCCTAAGGCCCACTCATGGACTTCCACTCATAGTTCAACCACTTTAG 1533 0.4103 MEFLGLFGVVVAILAALCLLILTFCWCFIPIQTYKKLKRCGFGGPTPSFPLGNIKEMIKRENINIIKSSVVSPNLSHDIHSYVFPYFSSWQKSHGKVFVYWLGTEPFLYIGEAEFLKKMSTEVMAKRWGKPSVFRNDRDPMFGSGLVMVEGNDWVRHRHIVSPAFNPINLKVMASRMVESTSQMIGRWTTLINNGNPEIDVEREIIATAGEIIAKTSFGMEDENAREVFDKLRALQMTLFKTNRYVGVPFGKYFNVKKTLEAKKLGKEIDQLLSSIIEARKKSPKMNSQQDLLGLMLKDNSGKTLTTREVIDECKTFFFGGHETTALAITWTLLLLAIHQDWQNQLRDEIKEVVGNNELDITMLAGLKKMKCVMNEVLRLYPPAPNVQRQAREDIQVDDFTVPNGTNMWIDVVAMHHDPELWGNDVNEFKPERFMDDVNGGCNHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSRFTFKVSPGYHHSPSIMLSLRPTHGLPLIVQPL. 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07707 510 Coils Coil 262 282 - -
Seca7g07707 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Seca7g07707 510 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 502 - -
Seca7g07707 510 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07707 510 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07707 510 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07707 510 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07707 510 Pfam Cytochrome P450 85 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07707 510 Gene3D Cytochrome P450 28 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07707 510 SUPERFAMILY Cytochrome P450 80 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07707 510 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07707 510 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07707 510 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07707 510 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07707 510 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07707 510 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g07707 510 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07707 Seca-Chr7 181181437 181184302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07707 6 510 Cytochrome P450 AT5G52400 60.039 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07707 - - gmx:100785284 868.226