Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07688 ATGCCAGTTGCAAAACTTACAGCCTCTGGCACTCCCAATTTCATGAAAACAGAAGATGGAAATGATTCTTTAGATACCATAATCAGACAAGCAATTGGAAAAGAACCTTTCCTTTCCTTTCCTAGGGCCGGTGACAGCCCAGTACAGTGGATTCAATTACTTCATGCTTTGGATCAGCAAGTAGAACTTCCAGGGTGGCCTTTGCTCTCTCCTGTGAAGGTTCAGTTACAGAAGTGCGACAAGTGTTCTCGAGAGTTTTGCTCTCCCATTAACTATAGAAGACATATACGTGTACACCATCGGTTGAAAAAGCTTGATAAGGACTCTAAAAAAAATAGGGATCTTTTAGGGGCATATTGGGATAAGCTCTCTGTAGAAGAGGCAAAGGAAATTGTGTCATTCAAGGATGTGATGCTGGAGGAAGTTCCAGGGTCTTCAATTTTAAAAGCTCTGACAAATCTTAGAAAACAAGGATTTTCTCCTCTACCACAGTATTATCTGAGGGCTGGTTCTGCACTTTTGGATATTGTTCAATCTAGGCCTTCTAGTTTTCCTATATCTTCCCAAGAGTTGTTCAGTATCCTTGATGATTCCAGTGAGAAAACCTTTTTATGTGGAACAGCGGTGTCAATGCAAAGATATATTTTTGATGGAGAGGCTGGAAAGATTGGTCTTGAACCAAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTAGAGCAGAAATTGGTGAAGGCATGGCTTGCTGACAAGGATGCTGAAGCATTGAGATGCCAGAAGCTTTTGGTGGAGGAGGAGGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTAGAGAGGAAACGCCAGAAAAAGCTTAGACAGAAAGAACACAAGGCGAGGGAAAGACTCGTAGATGACTCAGAAATTAAAGGGAACATTAGCAGCACAGGAGAGGATGTATCAGCAGCAGAAGCATCTTTGGCTGAATGTGACTTTGAAGTTAATAATAATCCAGATATATTTGTAGATGATACTCCTTCACCACATGTAACTTATCATTGCCCAGACACTAATGAAGGTGTAGATGGGGACACACAGTCAGGGAATGATTGTGACACTGATCACAATATCGAGCGACAGACATCACAAGGACGTAATCGCCGGCGCATGATGGCTTCCAGACGGCAAGGGCTGCCAAAATCACAATGGGCTATAGCCAATGGTTTGTATGCAAGCCAGAATTCTCAAATGTCAAAGCCTGGAGTTATTCAAAAATATGGAACCAGCCGTGATCAAAGGGTCACTCCTATAGTTAACGGTAGTAAAGTTTGGAGCCGGAAGCCTAAACCAGAAACTAATGGGATGGTTTTAAAAGTCAGACAGCATAAGGAACCAGATGAAGGTAAGAATCATGAAGTTTTGATAGGATCTGTATCTGTTACACTGGGAAATTGCAGCCAATCAGTCGGTAGTCGTGTGGCATCTCAAGGGGACTGCTCGGTAGAGAATCTGGCCAAACCAATTACTGCTCAGGAGAAGCCAATGAAACTTGAGTCCGTCCAGGGAGGCAACAGTAGGTTTACAGTCAAGCTTTGGAGACCTGTTAGCCAGCATGGAACGAAAGATCCGATGCCACTTCAAAGTAGTTGGACAGAAGCTGATGTTGTTCATGGAAAGGATGATCAAAATTTGTCAGGTCAAAGTAGTTTAAGGTTTTGTAATATAGATGGTAGTGATAATGGATTCGGGAACGACTCCCTTATTGGGGGTAAAGTAGATGGAGAAAGATTACAGTTATCCTGCCATGCTGCAAAAGCCTTTCTTGCGCAGAGATGGAAAGAAGCGATCTCATCAAACCATGTGAAATTGGTTGTTTCATCTGATTCTGAACCTCCTGGATCTCAGCGGGTCCAGGACTGTGAACTAGCAGCATGTCAATCTTCTAATGTGGACAGATGTAGCAATCTTGCAAATACAGAGAACCGGTTGCCTGCAACCTCCGGAGTAGCTAAATCCAAACCCAGAATGAAGCCTGAGAAGGGAATCAAGATAAAGTACATTCCCAAACAAAAAGCAGCAGCCTAG 2061 0.4299 MPVAKLTASGTPNFMKTEDGNDSLDTIIRQAIGKEPFLSFPRAGDSPVQWIQLLHALDQQVELPGWPLLSPVKVQLQKCDKCSREFCSPINYRRHIRVHHRLKKLDKDSKKNRDLLGAYWDKLSVEEAKEIVSFKDVMLEEVPGSSILKALTNLRKQGFSPLPQYYLRAGSALLDIVQSRPSSFPISSQELFSILDDSSEKTFLCGTAVSMQRYIFDGEAGKIGLEPKNLVACTSFLLEQKLVKAWLADKDAEALRCQKLLVEEEEAAQKRQAEILERKRQKKLRQKEHKARERLVDDSEIKGNISSTGEDVSAAEASLAECDFEVNNNPDIFVDDTPSPHVTYHCPDTNEGVDGDTQSGNDCDTDHNIERQTSQGRNRRRMMASRRQGLPKSQWAIANGLYASQNSQMSKPGVIQKYGTSRDQRVTPIVNGSKVWSRKPKPETNGMVLKVRQHKEPDEGKNHEVLIGSVSVTLGNCSQSVGSRVASQGDCSVENLAKPITAQEKPMKLESVQGGNSRFTVKLWRPVSQHGTKDPMPLQSSWTEADVVHGKDDQNLSGQSSLRFCNIDGSDNGFGNDSLIGGKVDGERLQLSCHAAKAFLAQRWKEAISSNHVKLVVSSDSEPPGSQRVQDCELAACQSSNVDRCSNLANTENRLPATSGVAKSKPRMKPEKGIKIKYIPKQKAAA. 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07688 686 ProSitePatterns Zinc finger C2H2 type domain signature. 79 100 IPR013087 -
Seca7g07688 686 MobiDBLite consensus disorder prediction 360 377 - -
Seca7g07688 686 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Seca7g07688 686 MobiDBLite consensus disorder prediction 350 389 - -
Seca7g07688 686 SMART c2h2final6 77 99 IPR013087 -
Seca7g07688 686 Coils Coil 266 293 - -
Seca7g07688 686 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07688 Seca-Chr7 180961666 180968709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07688 18 683 C2H2 Transcription Factor Family AT4G25610 44.510 4.26e-157 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca7g07688 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07688 - - gmx:100799153 1031.17