Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07686 ATGCCTTCATGGTGGGGAAAATCATCATCAAAAGAAACCAAGAAGAAAGCTGGTAAGGAAAGTTTTATTGACACATTGCACCGAAAACTTAAAATTCCATCTGAAGGTAGACTGGGCATTATATCTGGAGGATCTCGTAGACATTGCAATGACACAATTTCAGAGAAGGGGGATCGATCTCCAGCTGAATCAAGATCTCCTTCACCTTCTAAAGTGGCAAGGTGTCAAAGTTTTGCTGAAAGGCCTCATGCTCAGCCACTACCACTTCCTGGTCTGCACCCTGCAAGTGTAGGCCGAGTAGATTCTGAAATTAGCATATCATCAAAATCAAGACTGGAAAAGGGCTCCAAGCCATCATTGTTTCTTCCACTTCCAACACCTGGATGCATACGTTGTAGGCCAAACCCTACAGATTTGGATGGTGATATTGTCACTGCTTCAGTCTTTAGTGATTGCTCTGCTGATAGTGATGAGCCAGCAGACTCACGCAATCGCAGTCCTCTGGCAACTGACTCTGAGACTGGGACTAGAACTGCTGCTGGCAGTCCTTCCAGCTTGATGCTCAAGGATCAATCATCTGCTGCTTCCCAATTGAATTCAAGAGAAGTAAAAAAACCGGCAAACATTCTAAGTAATCATGTGTCTTCTACTTCACCCAAACGGAGACCTTTACGAAACCATGTTCCAAACCTTCAGGTTCCTCCTCATGGTGCCTTCTATAGTGCTCCTGACAGTTCCTTGTCAAGCCCATCAAGAAGTCCATTGAGGGCATTTGGTACAGATCAGGTGTTGAACTCTGCTTTTTGGGCTGGAAAGCCATATCCCGAGGTCAATTTAGTTGGATCTGGGCACTGCTCTAGTCCAGGTTCTGGTCACAATTCAATGGGAGGGGACATGTCAGGACCATTATTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCAGTACCTAGTCCCAGAATGACTAGCCCTGGTCCAAGCTCGAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCTAGAGCTGGGGGAACACCCACTGAATCGCAGACAGGATGGATTGATGATGGAAAACAACAGAGTCACCGTTTGCCCCTTCCTCCTTTATCAATTACCAATTCCTCGCCATTCTCTCATTCTAATTCTGCAGCAACATCTCCATCTATGCCAAGAAGTCCAGCTAGAGCAGATAACCCAATGAGCTCTGGGTCACGTTGGAAAAAAGGAAAGCTGCTTGGCAGAGGCACATTTGGACACGTCTATCTTGGCTTCAATAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACTCTGTTTTCAGATGATGCCAAGTCTATGGAAAGTGCTAAGCAATTAATGCAGGAAGTTCATTTATTAAGCCGTTTACGGCATCCGAATATTGTGCAGTATTATGGTTCCGAAACAGTAGATGACAAGCTTTACATATACCTTGAGTATGTATCTGGAGGCTCCATACATAAACTTCTTCAAGAGTATGGACAATTTGGTGAACTAGCTATTCGTAGTTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTACATGCTAAACATACTCTCCACAGGGACATCAAAGGAGCAAATATACTGGTAGATCCAAATGGTCGGGTCAAGTTGGCAGACTTTGGCATGGCGAAACATATAACAGGGCAGTCATGTCCATTGTCATTCAAAGGAAGCCCTTATTGGATGGCTCCCGAGGTTATAAAGAACTCTAATGGATGCAGCCTTGCTGTGGATATATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACCACCAAGCCTCCTTGGCATCAGTATGAAGGGGTTGCTGCGATGTTCAAGATTGGTAATAGTAAGGAACTCCCAGCAATCCCAGATCATCTCTCAAATGAAGGAAAAGATTTCGTTAGAAAATGTCTACAACGTAATCCACGTGATCGCCCTTCAGCAAGTGATTTATTGGACCACCCTTTTGTAAAATGTGCTGCACCTTTGGAAAGACCAATTCTTGTTCCTGAAGCTTCAGACCCTGTTTCTGGGATTACACAAGGAACAAAAGCTCTGGGCATTGGACAAGGAAGAAATCCGTCTGCCTTGGATTCAGATAAACTCTCTGTTCATTCTTCTAGGGTTTTGAATAGTAATCCTCATGAAAGTGAAATCCATATTCCAAGGAATATATCTTGCCCTGTCTCTCCCATTGGAAGCCCACTATTGAGGTCAAGATCACCACAACACAGGAATGGGAGAATGTCTCCTTCTCCTATATCTAGCCCTCGGACTGCTTCTGGTGCATCCACGCCTCTCACTGGTGGCAGTGGTGCCATTCCATTTAGCAATCACTTAAAACAGTCAGTTTACTTTCAAGAGGGTCTTGGAAGCATGCCAAAGTCCTCAAATGGTGTCTACATTAATGGCTCTACTCATCACGACTCGAATGTTGACATTTTTCGAGGAATGCAAATGGGGTCTCATATGACATCAGAACTCCTTTCCAGTGAAAATGATGTTCTGGGTAAGCAGTTTGCAAGGTCTCCACATTCAGAGCCATATGATTTTCAGTCAGTCTTAGCTGATCGTGTTGGCCGGCAGCTTCTGGGCGACCCTGTTAAGATTAACCCTTCCCTTGATCTAAGTCCCAACTCGTCTTTGCTCAACCGAGCAAACGGTTTATGA 2688 0.4461 MPSWWGKSSSKETKKKAGKESFIDTLHRKLKIPSEGRLGIISGGSRRHCNDTISEKGDRSPAESRSPSPSKVARCQSFAERPHAQPLPLPGLHPASVGRVDSEISISSKSRLEKGSKPSLFLPLPTPGCIRCRPNPTDLDGDIVTASVFSDCSADSDEPADSRNRSPLATDSETGTRTAAGSPSSLMLKDQSSAASQLNSREVKKPANILSNHVSSTSPKRRPLRNHVPNLQVPPHGAFYSAPDSSLSSPSRSPLRAFGTDQVLNSAFWAGKPYPEVNLVGSGHCSSPGSGHNSMGGDMSGPLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPTESQTGWIDDGKQQSHRLPLPPLSITNSSPFSHSNSAATSPSMPRSPARADNPMSSGSRWKKGKLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSMESAKQLMQEVHLLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRSYTQQILSGLAYLHAKHTLHRDIKGANILVDPNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCSLAVDIWSLGCTVLEMATTKPPWHQYEGVAAMFKIGNSKELPAIPDHLSNEGKDFVRKCLQRNPRDRPSASDLLDHPFVKCAAPLERPILVPEASDPVSGITQGTKALGIGQGRNPSALDSDKLSVHSSRVLNSNPHESEIHIPRNISCPVSPIGSPLLRSRSPQHRNGRMSPSPISSPRTASGASTPLTGGSGAIPFSNHLKQSVYFQEGLGSMPKSSNGVYINGSTHHDSNVDIFRGMQMGSHMTSELLSSENDVLGKQFARSPHSEPYDFQSVLADRVGRQLLGDPVKINPSLDLSPNSSLLNRANGL. 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07686 895 MobiDBLite consensus disorder prediction 1 20 - -
Seca7g07686 895 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524
Seca7g07686 895 MobiDBLite consensus disorder prediction 344 358 - -
Seca7g07686 895 SMART serkin_6 407 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07686 895 MobiDBLite consensus disorder prediction 366 400 - -
Seca7g07686 895 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 60 673 - -
Seca7g07686 895 Gene3D Transferase(Phosphotransferase) domain 1 404 679 - -
Seca7g07686 895 MobiDBLite consensus disorder prediction 742 780 - -
Seca7g07686 895 SUPERFAMILY Protein kinase-like (PK-like) 405 729 IPR011009 -
Seca7g07686 895 ProSiteProfiles Protein kinase domain profile. 407 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07686 895 Pfam Protein kinase domain 408 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g07686 895 CDD STKc_MEKK1_plant 406 663 - -
Seca7g07686 895 MobiDBLite consensus disorder prediction 165 223 - -
Seca7g07686 895 MobiDBLite consensus disorder prediction 678 780 - -
Seca7g07686 895 FunFam Mitogen-activated protein kinase kinase kinase 405 687 - -
Seca7g07686 895 MobiDBLite consensus disorder prediction 702 725 - -
Seca7g07686 895 MobiDBLite consensus disorder prediction 37 236 - -
Seca7g07686 895 MobiDBLite consensus disorder prediction 288 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07686 Seca-Chr7 180935542 180943945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07686 4 792 MAP Kinase Kinase Kinase AT1G63700 63.270 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Seca7g07686 Pkinase 6.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07686 K20717 - gmx:100797994 1555.04