Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g07676 ATGTCGTCACCGGGGTTCACGGGCGGTGGAGCCTCGGATTTCTTCGGCGGCGCAGCAGGTTTTTCCGGCAGATCCATGGCACTTCCACCACCCAACTTGAACAACAACAACCCTTCAACCACCACCACCCATCACAACCTTCATCCTCTCTACCGAACCCAGCAACAACTCCCCGCAATTTTCCTTGATCCTTCTTCCTCCCACATCGCCCAGCGCCAAACACCTTCCCTCATAGGTAAACGCACCCTCGCCGAATTTCAAATCCAAAACCACACCCTCAGCAATCTCCACAACCTCAATAACCATAACCCTATCCTTCCCAACCTTCTACTTCGTTCTGTCAAGCCCAGGACTTTCCGCCATGGCTCTCCTATGGATTTCTCAATCTCTTCCCCTGAATTGTCCAACTCACAGCGTTTAGGCATGCCCCTTCTTCACCAGCTTCGTCCAAATCCCGTTGGTCTAACCACCCCTCAACAAACCCCATTACCCATGACCCATACCAATACCCATTCCAATTACATCCTCTCAAACTCGAATTTACCATACCTAAATCCCAATTTGACGCAGCTGCAGAACAGAGTACCAAAAACCACTCATGAACCAGAGAAAAAGATGATGGACCATCGTCTACAGGAGTTGGAAAAGCAGCTTTTGGAAGACAATGATGACGAAGAAGGCGATGCTGTTTCTGTGATTACTGACTCTGAATGGTCAGAGACAATACAGAACTTGATCACTCCCGTCCAAACCCCAACACAGAAACCCGTTTCATCATCGCCTACTTCCTCAACGACGTCGTCGAACTCCACCTCTTCCTCCCTGGTTTCCCCTGCTTCCACCTGTTCCAAGCAATCGCTAATCGAGGTTGCATCCGCGATTTCCGAAGGGAAATTGGAGTCTGCGTTGGAGATCCTTAATCGCTTGGCTCAGGCTCCAAACCCGAATGGGAATTCGGATCAAAGATTCACGGATTGTATGGTTTCGGCGCTGAAATCGCGCATGAACCAGGTTGAAAACCCACCACCCGTGGCGGAACTGTTCAGCAGGGAACACGCCGAGTCAACTCAGTTGCTCTTCGAACACTCTGTCTGCTTCAAGGTCGCTTTCATGGCTGCCAACCTCGCAATTCTCGAAGCCGCATTCGACGATAGAACCGATAGCATGAAACTCTGCTTCGTCGATTTCGATATCGGGCATGGGAGGCAATATGTGAACCTTCTCCACGAGCTCTCCACGCGTCTCAATGGCTCGCCGGCGACGGTCAAGATCACCGCGGTGGCAGAGAACGCCGACGACGAGAGGTTGAAGACAGTGGGCGAGGTTCTTGGTCGACAAGCGGAGCGGCTCAGGATCGGGTTTGAATTCAAAGTGGTAACTCAAAAACTCGCCGAGTTGACCCGCGAGTCGCTGGGTTGTGACACGGACGAGTTTCTGGCTGTGAACTTCGCGTTCAAGCTTTACAGAATGCCTGACGAGAGCGTGTCGACGGAGAACCCACGCGACGAGCTTCTCCGGCGCGTGAAGGCACTCGCGCCGCGTGTGGTAACTCTTGTGGAGCAAGAGATGAACACAAATACGGCGCCGTTTGTGGCTCGCGTGGCCGAGTCGTGCTCTTATTATGGCGCGCTGTTTGAGTCAATTGATTCCACTATGGCGCGGGACAACTCGGAGCGAGTCAAGATTGAGGAGGGACTGAGTCGGAAGCTGGGGAACTCGATCGCTTGCGAAGGGAGGGATCGTGTGGAACGATGTGAGGTGTTTGGGAAATGGCGCGCACGCATGAGCATGGCTGGGTTCAGGTTGAAACCGGTGAGTCAGAAGGTGGCCGAGTCAATCAATGTGCGACTCGGTCCCGGAAACCGAGTCACGGTGAAAGAAGAAAACGGTGGGATTTGCTGTGAGTGGATGGGAAGAACTCTCACCGTCGCATCTACTTGGCGTTAA 1947 0.5285 MSSPGFTGGGASDFFGGAAGFSGRSMALPPPNLNNNNPSTTTTHHNLHPLYRTQQQLPAIFLDPSSSHIAQRQTPSLIGKRTLAEFQIQNHTLSNLHNLNNHNPILPNLLLRSVKPRTFRHGSPMDFSISSPELSNSQRLGMPLLHQLRPNPVGLTTPQQTPLPMTHTNTHSNYILSNSNLPYLNPNLTQLQNRVPKTTHEPEKKMMDHRLQELEKQLLEDNDDEEGDAVSVITDSEWSETIQNLITPVQTPTQKPVSSSPTSSTTSSNSTSSSLVSPASTCSKQSLIEVASAISEGKLESALEILNRLAQAPNPNGNSDQRFTDCMVSALKSRMNQVENPPPVAELFSREHAESTQLLFEHSVCFKVAFMAANLAILEAAFDDRTDSMKLCFVDFDIGHGRQYVNLLHELSTRLNGSPATVKITAVAENADDERLKTVGEVLGRQAERLRIGFEFKVVTQKLAELTRESLGCDTDEFLAVNFAFKLYRMPDESVSTENPRDELLRRVKALAPRVVTLVEQEMNTNTAPFVARVAESCSYYGALFESIDSTMARDNSERVKIEEGLSRKLGNSIACEGRDRVERCEVFGKWRARMSMAGFRLKPVSQKVAESINVRLGPGNRVTVKEENGGICCEWMGRTLTVASTWR. 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g07676 648 MobiDBLite consensus disorder prediction 246 278 - -
Seca7g07676 648 Pfam GRAS domain family 284 648 IPR005202 -
Seca7g07676 648 Coils Coil 204 224 - -
Seca7g07676 648 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 255 617 IPR005202 -
Seca7g07676 648 ProSiteProfiles GRAS family profile. 274 648 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g07676 Seca-Chr7 180793730 180795676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g07676 32 648 GRAS Transcription Factor Family AT5G52510 50.463 3.88e-169 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca7g07676 GRAS 1.2e-97 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g07676 - - tpra:123914170 783.482