LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca7g07672	ATGGACACCCAAAAGATTATATCTTTAATCTTTCTCTTTCTCTTTCTCATTCCTTTCTCAGTTTCCTTCACTCCCATAGACAACTACCTTCTTAACTGTGGATCACACAACAATGCTTCCCTCTTCAACAGAGTCTTCATTAGCGATTCCACCAACCCAGGTTCCAATTTTCTCTCTTCAGATGATTCAATTTCTCTCACAAACCAAAAGCCACCTCCAAATTTGCCCACTTTGTACCACACAGCAAGAGTTTTCACCACCACAGGGAGATACAGGTTCAACATGAAGAAAAACGGTACCCACTTGGTGCGTTTTCATTTCTCTCCCTTTAAAGCTCAAAATTTTGATCTGAAATCTGCAAAATTTGGTGTCTTGGTTAATGGGATTTCGGTTCTGAGGGAATTCCAGCCACCTAATGATGTTCTGCTCAAAGAGTTTATTTTGAAGGTAGAATCAAACTTGCTTGAGATTTTGTTTAGGCCTGTTGGTAACTCAGGTTTTAGCTTTGTCAATGCTGTGGAGGTTTTTACTGCTCCTTCAGATTTTGTTATAGATTATGGAACCAGGTTGATTGGTCCTTCTGGAGTGGAGGAATTCAAAAACCTTTCATCTCAGGTTTTAGAAACTATTCATAGGATTAATGTTGGAGGTATGAAAATAACCCCTTTCAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGATTATCTTGTTTTTAAGGATGCAGCTAAGCCTGCAGTAACCACTCACACACCAAATTACCAGAAGGGAGGTGCAACTAGAGAGATTGCACCTGAAAATGTTTACATGACTGCTCAGCAGATGAACAGGGAAAACTCAAGTTTAGCTTCAAGATTCAACATAACATGGAATTTTCCTGTGGCTCCTGGTGATGTTCCACACTTGGTTCGGTTGCATTTCTGTGATATTGTTAGTCCTTCTCTGAACTTGCTCTACTTTGATGTGTATATCAATGGTTACATTGCTTATAAGGATCTTGATTTGTCAACCCTTACAATCCACACGCTTGCATCACCAGTCTATGTGGATTTTGTTGTGAATTCAGATGATTCAGGTGTTATTGAAATAAGTGTTGGTCCTTCTGACCTGAGCAGTAATATTAGGATGAATGCCATATTGAATGGTGCAGAAATTATGAAGATGGTCAATGATGTTGATACTCATGTTGTGCACAGGAGGAAAAACTTGTGGGTGTTGGTGGGTTCAATTGTTGGAGGAATTGTTGTCTTATTTTTAGTTGTGACTGCTTTTCTACTTGGTACCAAATGCAGGAAGAGGAAACCAAAACAAAGGACAATGGAAAGTGTTGGATGGACACCTCTACGAATGTTTGGAGGGAGTTCCCTTAGTAGATCTTCTGAACCTGGTTCTCATGGATATCTTGGCTTGAAGATCCCTTTTGCTGAGATACAATTAGCAACAAACAATTTTGATAGAAGTTTGATTATAGGGTCTGGTGGGTTTGGTATGGTCTACAAGGGAGTACTCAGAGACAATGTCAAGGTTGCTGTCAAGAGAGGTATGCCAGGTTCAAGACAAGGCCTTCCAGAATTCCAGACTGAAATAACAGTTTTATCTAAAATTCGCCATCGCCACCTTGTTTCACTAGTTGGTTTTTGTGAAGAAAATTCAGAAATGATACTTGTCTATGAGTATGTGGAAAAAGGTCCACTGAAGAAACATTTATATGGTTCAGCAAGACTACCACCACTCACTTGGAAGCAGCGTCTTGAAATATGCATTGGTGCAGCTAGAGGTCTCCACTATCTTCACACTGGTTTTGCTCAAGGAATCATCCACCGTGACATTAAATCAACCAATATATTGCTTGATGAAAATTATGTGGCTAAAGTTGCTGACTTTGGTCTTTCAAGATCTGGGCCTTGCATCAATGAAACACATGTGAGTACTGGTGTGAAAGGTAGTTTTGGTTATCTTGATCCTGAGTATTACCGGAGGCAGCAGCTTACAGATAAATCAGATGTTTATTCATTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGGTAGACCTGCTGTTGATCCACAACTAACCAGGGAACAGGTGAATTTAGCAGAATGGGCACTTGAATGGCTGAAGAAGGGCATGCTGGAACATATTGTTGACCCCTATCTTGTTGGACAGATCAAACCAAGCTCATTGAAGAAATTTGGTGAAACAGCAGAGAAATGTTTGGCTGAATATAGTGTTGACAGGCCAACTATGGGTGATGTCTTATGGAATTTGGAACATGCACTTCAGTTACAAGAAAGTGATAGCAGTGCTGATGAATCAGTGAGTGTGTCAACTACAATTATGCCTGAAAATCATTCTACCAACAGGAGAACAGAGAGAGATTATGGTAATGGTTGTTCAGATGTAAGTACTAGTGAAGTGTTTTCTCAGCTAATGACCAATGAAGGCAGATAG	2451	0.4011	MDTQKIISLIFLFLFLIPFSVSFTPIDNYLLNCGSHNNASLFNRVFISDSTNPGSNFLSSDDSISLTNQKPPPNLPTLYHTARVFTTTGRYRFNMKKNGTHLVRFHFSPFKAQNFDLKSAKFGVLVNGISVLREFQPPNDVLLKEFILKVESNLLEILFRPVGNSGFSFVNAVEVFTAPSDFVIDYGTRLIGPSGVEEFKNLSSQVLETIHRINVGGMKITPFNDTLWRTWIPDEDYLVFKDAAKPAVTTHTPNYQKGGATREIAPENVYMTAQQMNRENSSLASRFNITWNFPVAPGDVPHLVRLHFCDIVSPSLNLLYFDVYINGYIAYKDLDLSTLTIHTLASPVYVDFVVNSDDSGVIEISVGPSDLSSNIRMNAILNGAEIMKMVNDVDTHVVHRRKNLWVLVGSIVGGIVVLFLVVTAFLLGTKCRKRKPKQRTMESVGWTPLRMFGGSSLSRSSEPGSHGYLGLKIPFAEIQLATNNFDRSLIIGSGGFGMVYKGVLRDNVKVAVKRGMPGSRQGLPEFQTEITVLSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSARLPPLTWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCINETHVSTGVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLTREQVNLAEWALEWLKKGMLEHIVDPYLVGQIKPSSLKKFGETAEKCLAEYSVDRPTMGDVLWNLEHALQLQESDSSADESVSVSTTIMPENHSTNRRTERDYGNGCSDVSTSEVFSQLMTNEGR.	817

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca7g07672	816	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	606	618	IPR008271	GO:0004672\|GO:0006468
	Seca7g07672	816	Pfam	Protein tyrosine and serine/threonine kinase	490	750	IPR001245	GO:0004672\|GO:0006468
	Seca7g07672	816	Gene3D	-	206	391	-	-
	Seca7g07672	816	Gene3D	-	28	180	-	-
	Seca7g07672	816	FunFam	receptor-like protein kinase FERONIA	454	560	-	-
	Seca7g07672	816	Pfam	Malectin-like domain	31	389	IPR024788	-
	Seca7g07672	816	FunFam	Putative receptor-like protein kinase	28	179	-	-
	Seca7g07672	816	CDD	STKc_IRAK	491	757	-	-
	Seca7g07672	816	FunFam	Receptor-like protein kinase FERONIA	206	391	-	-
	Seca7g07672	816	PANTHER	OS07G0166700 PROTEIN	472	763	IPR045272	GO:0004714\|GO:0006468
	Seca7g07672	816	ProSiteProfiles	Protein kinase domain profile.	485	761	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Seca7g07672	816	MobiDBLite	consensus disorder prediction	765	784	-	-
	Seca7g07672	816	Gene3D	Transferase(Phosphotransferase) domain 1	561	781	-	-
	Seca7g07672	816	MobiDBLite	consensus disorder prediction	765	801	-	-
	Seca7g07672	816	ProSitePatterns	Protein kinases ATP-binding region signature.	491	513	IPR017441	GO:0005524
	Seca7g07672	816	FunFam	Receptor-like protein kinase FERONIA	561	774	-	-
	Seca7g07672	816	SUPERFAMILY	Protein kinase-like (PK-like)	471	754	IPR011009	-
	Seca7g07672	816	Gene3D	Phosphorylase Kinase; domain 1	458	560	-	-
	Seca7g07672	816	SMART	serkin_6	485	760	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca7g07672	Seca-Chr7	180738982	180741456	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca7g07672	9	816	Receptor kinase-like Gene Family	AT3G46290	48.984	0.0	744

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Seca7g07672		Malectin_like	3.3e-33	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca7g07672	-		-	gmx:100801169	1394.02